##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527684_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1113673 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.723516687573465 34.0 31.0 34.0 31.0 34.0 2 33.16826303591808 34.0 33.0 34.0 31.0 34.0 3 33.115020297699594 34.0 34.0 34.0 31.0 34.0 4 36.52074711338068 37.0 37.0 37.0 35.0 37.0 5 36.475908098696834 37.0 37.0 37.0 35.0 37.0 6 36.53970959159466 37.0 37.0 37.0 35.0 37.0 7 36.57136969289908 37.0 37.0 37.0 35.0 37.0 8 36.709337480571044 37.0 37.0 37.0 35.0 37.0 9 38.77287408422401 39.0 39.0 39.0 39.0 39.0 10 38.297238956138834 39.0 39.0 39.0 37.0 39.0 11 38.11247466715993 39.0 39.0 39.0 37.0 39.0 12 37.690655156405874 39.0 37.0 39.0 35.0 39.0 13 37.601698164542015 39.0 37.0 39.0 35.0 39.0 14 38.381050811144746 40.0 38.0 40.0 35.0 40.0 15 38.43375479157706 40.0 38.0 40.0 35.0 40.0 16 38.473797964034326 40.0 38.0 40.0 35.0 40.0 17 38.4007495916665 40.0 38.0 40.0 35.0 40.0 18 38.328586577927275 40.0 38.0 40.0 35.0 40.0 19 38.32163301076707 40.0 38.0 40.0 34.0 40.0 20 38.23939612435607 40.0 38.0 40.0 34.0 40.0 21 38.236158190061175 40.0 38.0 40.0 34.0 40.0 22 38.26170608428147 40.0 38.0 40.0 35.0 40.0 23 38.18757840048201 40.0 38.0 40.0 35.0 40.0 24 38.155510639119385 40.0 38.0 40.0 35.0 40.0 25 38.132009126556895 40.0 38.0 40.0 35.0 40.0 26 38.02253534026595 40.0 38.0 40.0 35.0 40.0 27 37.95259111067612 40.0 37.0 40.0 34.0 40.0 28 37.82488845469002 40.0 37.0 40.0 34.0 40.0 29 37.84477939215551 40.0 37.0 40.0 34.0 40.0 30 37.94756988810899 40.0 37.0 40.0 34.0 40.0 31 37.97385857428527 40.0 37.0 40.0 34.0 40.0 32 37.951763219544695 40.0 37.0 40.0 35.0 40.0 33 37.86922193498451 40.0 37.0 40.0 34.0 40.0 34 37.57355884537023 40.0 37.0 40.0 33.0 40.0 35 37.60569664524506 40.0 36.0 40.0 33.0 40.0 36 37.611810648188474 40.0 36.0 40.0 34.0 40.0 37 37.54159703970555 40.0 36.0 40.0 34.0 40.0 38 37.501842102663886 40.0 35.0 40.0 34.0 40.0 39 37.421494460223066 40.0 35.0 40.0 34.0 40.0 40 37.26366806055278 40.0 35.0 40.0 33.0 40.0 41 37.15902423781487 40.0 35.0 40.0 33.0 40.0 42 37.1176305791736 40.0 35.0 40.0 33.0 40.0 43 37.00674614541252 40.0 35.0 40.0 33.0 40.0 44 36.75579366654305 40.0 35.0 40.0 33.0 40.0 45 36.7355453530794 39.0 35.0 40.0 33.0 40.0 46 36.58637589310327 39.0 35.0 40.0 32.0 40.0 47 36.54973677192497 39.0 35.0 40.0 32.0 40.0 48 36.46875159943718 39.0 35.0 40.0 32.0 40.0 49 36.369677634278645 39.0 35.0 40.0 32.0 40.0 50 35.917212682717455 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 2.0 15 5.0 16 13.0 17 42.0 18 77.0 19 156.0 20 329.0 21 573.0 22 862.0 23 1353.0 24 2014.0 25 2819.0 26 3827.0 27 5104.0 28 6907.0 29 8923.0 30 11929.0 31 15767.0 32 20085.0 33 26891.0 34 53890.0 35 83102.0 36 82033.0 37 133745.0 38 335207.0 39 318016.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.38716301822888 0.46117666496359344 0.10290273715893264 0.048757579648604214 8 99.33391579036216 0.4896410346663697 0.08287890610619096 0.09356426886527734 9 97.78076688579142 1.3988845917966943 0.4028112381282477 0.41753728428362724 10 53.0297493070228 34.370591726655846 4.873423347787007 7.7262356185343455 11 34.374452824123416 22.72731762375491 24.96145637004758 17.93677318207409 12 30.480670717526596 18.029708900188833 27.314121829298188 24.17549855298638 13 24.754214208299924 18.16134538594363 28.390829264963774 28.693611140792676 14 23.96304839930572 20.026973806494368 28.998548047766263 27.011429746433645 15 25.05376353741179 23.498010636874557 27.128878943819235 24.319346881894415 16 30.156967081001333 22.578440888842596 25.197252694462378 22.067339335693692 17 29.806415348131814 22.598374926930976 22.871884296377843 24.72332542855937 18 28.423334318062842 23.404985125795452 24.873549057937115 23.29813149820459 19 29.629074243516722 23.78094826757944 22.28670354763023 24.303273941273606 20 30.1243722349379 24.57938730668697 22.649916088474804 22.64632436990032 21 30.359001250815993 22.69193919579625 24.00857343223729 22.940486121150464 22 27.047706104035925 22.856439906507568 25.353672038381102 24.742181951075406 23 26.57557469742016 24.574448693647057 25.373246904612035 23.476729704320746 24 27.512743866467087 25.534964033428125 23.776368826396975 23.175923273707813 25 26.206884785749494 26.07372181960055 22.380267816495504 25.339125578154448 26 25.27070333931055 27.309362802187 22.52276925093811 24.89716460756434 27 23.849550092352064 23.671670229950802 24.499830740262176 27.978948937434957 28 25.193391596994807 26.07506871406598 23.01537345342843 25.716166235510784 29 28.18771757957677 25.24277772739395 21.965154942249654 24.604349750779626 30 26.561477202015315 24.686510313170924 24.232696671285016 24.519315813528745 31 28.855777234430573 24.5814525448673 22.223579093683693 24.339191127018434 32 30.244066256432546 24.65607049825218 22.09203240089326 23.007830844422017 33 28.756196836953034 24.331379139118933 23.7460188044426 23.166405219485434 34 26.648037619660347 25.81960773045589 25.891531894909907 21.640822754973858 35 25.737716546957678 28.136176418032942 24.641164866168076 21.484942168841304 36 25.751185491611988 28.597891840782708 22.77553644561734 22.875386221987963 37 27.23276940358615 28.947006886222436 21.485121754770027 22.335101955421386 38 27.641955942184104 28.572211052975156 21.337861293216232 22.447971711624508 39 28.003193037812714 26.25214043978798 21.883982102466344 23.86068441993296 40 25.68877938138035 27.08263556717277 21.76150449907648 25.467080552370398 41 24.300041394556573 27.671767206352314 22.478680905436335 25.549510493654783 42 23.593819729848885 25.899523468738128 22.66114020902006 27.845516592392922 43 23.730394828643597 25.276899053851537 24.590701220196593 26.402004897308277 44 25.07899536039753 24.297257812661346 24.273193298212313 26.35055352872881 45 25.82301986310165 25.465284693083156 23.23563559500859 25.47605984880661 46 24.672771989623524 27.211578263996707 23.778164685684217 24.337485060695556 47 25.181000167912842 26.02496423995194 23.86849640783246 24.925539184302753 48 25.536670099751003 26.034212915281234 24.607133332674852 23.821983652292907 49 26.517299063549178 25.77273580305889 23.719799258848873 23.990165874543067 50 24.763373090664853 25.271870647847262 24.72763549084875 25.237120770639137 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 3.0 6 6.0 7 5.0 8 4.0 9 42.0 10 80.0 11 1674.5 12 3269.0 13 5534.0 14 7799.0 15 8609.5 16 9420.0 17 7482.5 18 5545.0 19 5084.0 20 4623.0 21 4673.0 22 4723.0 23 4792.5 24 4862.0 25 5240.0 26 5618.0 27 6425.5 28 7233.0 29 7965.0 30 8697.0 31 10027.5 32 11358.0 33 13296.5 34 15235.0 35 16495.0 36 17755.0 37 19580.5 38 21406.0 39 23852.0 40 26298.0 41 29437.5 42 32577.0 43 34346.5 44 36116.0 45 38177.0 46 40238.0 47 43151.0 48 46064.0 49 50411.0 50 54758.0 51 56747.0 52 58736.0 53 62583.0 54 66430.0 55 71887.0 56 77344.0 57 85129.5 58 92915.0 59 94809.5 60 96704.0 61 94385.0 62 92066.0 63 91573.0 64 91080.0 65 76898.5 66 62717.0 67 51473.0 68 40229.0 69 32130.0 70 24031.0 71 21167.0 72 18303.0 73 14567.0 74 10831.0 75 11265.5 76 11700.0 77 8361.5 78 5023.0 79 3057.0 80 1091.0 81 748.5 82 406.0 83 369.0 84 332.0 85 176.5 86 21.0 87 24.5 88 28.0 89 14.0 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1113673.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.018563898915936 #Duplication Level Percentage of deduplicated Percentage of total 1 67.34721606717898 6.073751715159516 2 9.26304674471979 1.6707875793180136 3 3.444857201917348 0.9320299439439705 4 1.6339087881929752 0.5894204324527461 5 0.8799505673816392 0.3967945209909323 6 0.6119656165766809 0.3311430610221771 7 0.43297567307454343 0.2733373142009234 8 0.3629796058319722 0.2618843815359168 9 0.31298241494598583 0.2540386717584655 >10 9.233481212815411 24.523975333337656 >50 4.444750269760072 27.501737825870315 >100 1.9548901636402567 29.17341509189327 >500 0.05199707852137767 3.1871617810747823 >1k 0.02299870780753243 3.837363706306777 >5k 0.001999887635437603 0.9931586411345305 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5856 0.5258275993042841 No Hit CCATCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5157 0.4630623172151969 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4035 0.36231461120095393 No Hit CCATCTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4014 0.3604289589493505 No Hit CCATCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2893 0.2597710458994696 No Hit CCATCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2877 0.25833435846967645 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 2621 0.23534735959298644 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 2514 0.22573951240624493 No Hit CCATCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2123 0.1906304633406754 No Hit CCATCTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1792 0.1609089921368301 No Hit CCATCTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1676 0.15049300827082995 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 1615 0.14501563744474366 No Hit CCATCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1587 0.14250143444260568 No Hit CCATCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1441 0.12939166164574342 No Hit CCATCTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1428 0.12822435310903652 No Hit CCATCTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 1386 0.12445304860582954 No Hit CCATCTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 1273 0.11430644363291557 No Hit CCATCTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1239 0.11125348284460519 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 1235 0.11089431098715691 No Hit CCATCTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1211 0.10873927984246723 No Hit CCATCTGGGAGCACATATCTCCTAACCTTTGAAGAATCTCCATTTTCTTT 1188 0.1066740416621396 No Hit CCATCTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCCATCTGGGA 1146 0.10290273715893264 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005926335647896645 0.0 0.0 0.0 0.0 8 0.008620124578758756 0.0 0.0 0.0 0.0 9 0.010146604972913953 0.0 0.0 0.0 0.0 10 0.02621954559372455 0.0 0.0 0.0 0.0 11 0.04283124400070757 0.0 0.0 0.0 0.0 12 0.05216971229436289 0.0 0.0 0.0 0.0 13 0.05935314944332852 0.0 0.0 0.0 0.0 14 0.07111602777475974 0.0 0.0 0.0 0.0 15 0.08521352317960479 0.0 0.0 0.0 0.0 16 0.1024537723371223 0.0 0.0 0.0 0.0 17 0.11852671295793289 0.0 0.0 0.0 0.0 18 0.1324446224340538 0.0 0.0 8.979296436207038E-5 0.0 19 0.14573398115964023 0.0 0.0 8.979296436207038E-5 0.0 20 0.1627048514240715 0.0 0.0 8.979296436207038E-5 0.0 21 0.17509628050603723 0.0 0.0 8.979296436207038E-5 0.0 22 0.1897325336970547 0.0 0.0 8.979296436207038E-5 0.0 23 0.20733195471202048 0.0 0.0 8.979296436207038E-5 0.0 24 0.22663744204986563 0.0 0.0 8.979296436207038E-5 0.0 25 0.24163286709833137 0.0 0.0 8.979296436207038E-5 0.0 26 0.2633627644739524 0.0 0.0 8.979296436207038E-5 0.0 27 0.2813213573463665 0.0 0.0 8.979296436207038E-5 0.0 28 0.3104142777996773 0.0 0.0 8.979296436207038E-5 0.0 29 0.32918100735135 0.0 0.0 8.979296436207038E-5 0.0 30 0.34992318211898826 0.0 0.0 8.979296436207038E-5 0.0 31 0.36357171270202293 0.0 0.0 8.979296436207038E-5 0.0 32 0.3826078211467819 0.0 0.0 8.979296436207038E-5 0.0 33 0.39814200398142 0.0 0.0 8.979296436207038E-5 0.0 34 0.4174474913192652 0.0 0.0 8.979296436207038E-5 0.0 35 0.4428589002337311 0.0 0.0 8.979296436207038E-5 0.0 36 0.4620745946072142 0.0 0.0 8.979296436207038E-5 0.0 37 0.4804821523014386 0.0 0.0 8.979296436207038E-5 0.0 38 0.4995182607461975 0.0 0.0 8.979296436207038E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCGT 20 7.8563753E-4 44.000004 23 CGAAATA 20 7.8563753E-4 44.000004 24 TTTACGC 20 7.8563753E-4 44.000004 11 TAAACGA 20 7.8563753E-4 44.000004 19 ATTCGAT 20 7.8563753E-4 44.000004 24 CACGATA 20 7.8563753E-4 44.000004 36 TAACGGT 20 7.8563753E-4 44.000004 24 CGCTAGT 20 7.8563753E-4 44.000004 27 GTCACGC 20 7.8563753E-4 44.000004 16 AACGACC 20 7.8563753E-4 44.000004 32 AACGAAT 20 7.8563753E-4 44.000004 21 CGTACAT 20 7.8563753E-4 44.000004 36 TACTCGC 20 7.8563753E-4 44.000004 16 TTACGTC 20 7.8563753E-4 44.000004 19 TTACACG 20 7.8563753E-4 44.000004 14 GTAACGG 20 7.8563753E-4 44.000004 23 AATCGAA 20 7.8563753E-4 44.000004 35 TCCGATA 55 1.8189894E-12 44.0 25 CGGTTAG 25 4.4427507E-5 44.0 18 CACGCTA 35 1.4460238E-7 44.0 21 >>END_MODULE