##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527683_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1665807 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40991843592925 33.0 31.0 34.0 31.0 34.0 2 32.858696715765994 34.0 31.0 34.0 31.0 34.0 3 32.8143086203864 34.0 31.0 34.0 31.0 34.0 4 36.36327617785253 37.0 37.0 37.0 35.0 37.0 5 36.203878960767966 37.0 37.0 37.0 35.0 37.0 6 36.36585210651654 37.0 37.0 37.0 35.0 37.0 7 36.49192973735853 37.0 37.0 37.0 35.0 37.0 8 36.63364303307646 37.0 37.0 37.0 35.0 37.0 9 38.70935348452732 39.0 39.0 39.0 39.0 39.0 10 38.09867229516985 39.0 38.0 39.0 37.0 39.0 11 37.80701545857353 39.0 38.0 39.0 35.0 39.0 12 37.35884169054398 39.0 37.0 39.0 35.0 39.0 13 37.2629110094987 39.0 37.0 39.0 34.0 39.0 14 38.06365443295652 40.0 38.0 40.0 34.0 40.0 15 38.13281730716704 40.0 38.0 40.0 34.0 40.0 16 38.17144122938612 40.0 38.0 40.0 35.0 40.0 17 38.09498339243382 40.0 38.0 40.0 34.0 40.0 18 38.089111163538156 40.0 38.0 40.0 34.0 40.0 19 38.08324433742925 40.0 38.0 40.0 34.0 40.0 20 38.06518042006067 40.0 38.0 40.0 34.0 40.0 21 38.04317306866882 40.0 38.0 40.0 34.0 40.0 22 38.029170246012896 40.0 38.0 40.0 34.0 40.0 23 37.9997142526115 40.0 38.0 40.0 34.0 40.0 24 37.958261071060456 40.0 37.0 40.0 34.0 40.0 25 37.930349074052394 40.0 37.0 40.0 34.0 40.0 26 37.79347007186307 40.0 37.0 40.0 34.0 40.0 27 37.718893005011985 40.0 37.0 40.0 34.0 40.0 28 37.63210684070844 40.0 36.0 40.0 34.0 40.0 29 37.56346503526519 40.0 36.0 40.0 33.0 40.0 30 37.429330048438985 40.0 36.0 40.0 33.0 40.0 31 37.355998624090304 40.0 36.0 40.0 33.0 40.0 32 37.25938539098467 40.0 35.0 40.0 33.0 40.0 33 37.14924718169632 39.0 35.0 40.0 33.0 40.0 34 36.97839965854388 39.0 35.0 40.0 32.0 40.0 35 36.91169625292726 39.0 35.0 40.0 32.0 40.0 36 36.95825326703514 39.0 35.0 40.0 32.0 40.0 37 36.86628042744447 39.0 35.0 40.0 32.0 40.0 38 36.83815892237216 39.0 35.0 40.0 32.0 40.0 39 36.74189266823828 39.0 35.0 40.0 32.0 40.0 40 36.55925086159441 39.0 35.0 40.0 31.0 40.0 41 36.45120893356793 39.0 35.0 40.0 31.0 40.0 42 36.409646495662464 39.0 35.0 40.0 31.0 40.0 43 36.279857150318136 38.0 35.0 40.0 31.0 40.0 44 36.178041633874756 38.0 35.0 40.0 31.0 40.0 45 36.068506735774314 38.0 35.0 40.0 30.0 40.0 46 35.933084084770925 38.0 35.0 40.0 30.0 40.0 47 35.79762661580843 38.0 35.0 40.0 30.0 40.0 48 35.62153718888202 38.0 34.0 40.0 29.0 40.0 49 35.86950048835189 38.0 35.0 40.0 30.0 40.0 50 35.921088097240556 38.0 35.0 40.0 30.0 40.0 51 35.936774188126236 38.0 35.0 40.0 31.0 40.0 52 35.47919296773276 37.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 8.0 16 23.0 17 53.0 18 126.0 19 281.0 20 597.0 21 992.0 22 1746.0 23 2701.0 24 4100.0 25 5880.0 26 8045.0 27 11237.0 28 14533.0 29 18668.0 30 23840.0 31 30505.0 32 40236.0 33 56045.0 34 104838.0 35 127469.0 36 150649.0 37 226718.0 38 515514.0 39 320999.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.46722519475546 0.4343240243317503 0.06735474157570476 0.031096039337090074 8 99.3908057776201 0.45851650281215045 0.06597402940436677 0.08470369016338627 9 97.80706888613146 1.3755495084364515 0.3917620708761579 0.42561953455592394 10 53.04576100352561 34.40752740263428 4.833933342818226 7.712778251021877 11 34.45189028500901 22.699808561255896 24.828866729459055 18.019434424276042 12 30.566686296791882 17.915160639858037 27.350827556853822 24.16732550649625 13 24.856060756138014 17.938752808698727 28.378317536185165 28.82686889897809 14 23.962860043210288 19.844615852856904 29.10595285048028 27.08657125345253 15 25.262710506079035 23.273824638748668 27.107702152770397 24.355762702401897 16 30.342410615395423 22.394190923678433 25.175425484464885 22.08797297646126 17 29.94050331160813 22.45212080391066 22.884043589683557 24.723332294797657 18 28.567295010766554 23.218536120931176 24.93698249557122 23.277186372731055 19 29.71070478152631 23.466223878276416 22.344185130690413 24.478886209506864 20 30.084757718030957 24.40919026033628 22.788654387933295 22.717397633699463 21 30.474538767096064 22.439634363404647 24.036337943111057 23.049488926388232 22 27.017235490065776 22.69302506232715 25.350355713477015 24.939383734130065 23 26.785275845281 24.184134176408193 25.50565581727055 23.524934161040264 24 27.612262404948474 25.243920814356045 23.81050145665134 23.333315324044143 25 26.27543286827346 25.78407942816905 22.412140181905826 25.528347521651668 26 25.41915119818803 26.95660421645485 22.459504612479115 25.16473997287801 27 23.94557112558658 23.316086437384403 24.492753362184214 28.24558907484481 28 25.261750010655497 25.836726583571807 23.015631462708466 25.88589194306423 29 28.288211059264366 25.051821729648154 21.96827123430265 24.691695976784825 30 26.774170116946323 24.351740627815825 24.23167869987339 24.642410555364457 31 28.988892470736406 24.223874674557138 22.188945057860845 24.598287796845614 32 30.455749075373078 24.33451174115609 22.131255301484508 23.07848388198633 33 28.948311539091865 23.96292007417426 23.796994489757818 23.29177389697606 34 26.631716639442626 25.502954423891843 25.9756382342012 21.889690702464332 35 25.79644580674712 27.901491589361793 24.782342732381363 21.519719871509725 36 25.896517423687136 28.34067812177521 22.832116805848457 22.930687648689194 37 27.33780083767207 28.60901653072655 21.53544798407018 22.517734647531196 38 27.85652839734735 28.259876444269956 21.367421315914747 22.516173842467946 39 28.056191383515618 26.050676939165225 21.894913396329827 23.998218280989335 40 25.73917626711858 26.716960608281752 21.86543819301996 25.67842493157971 41 24.34447688117531 27.344584336600818 22.563958489789034 25.74698029243484 42 23.651719556947473 25.601105049984785 22.75767841052415 27.989496982543592 43 23.851202450223827 24.947367852338235 24.616657271820806 26.584772425617132 44 25.080996778138164 23.895085084886787 24.511903239691033 26.51201489728402 45 25.90053949827321 25.025708260320673 23.210792126578887 25.862960114827228 46 24.593905536475713 26.982657654818354 23.905770596473662 24.51766621223227 47 25.316978497509012 25.593120931776607 23.959858495011726 25.130042075702647 48 25.691871867509263 25.600804895164924 24.747344680386142 23.95997855693967 49 26.743374232429083 25.31445719702222 23.83025164379787 24.11191692675082 50 24.882354318357407 24.880313265582387 24.856000725174045 25.38133169088616 51 23.443111957147497 25.215586199361628 25.202379387287966 26.138922456202913 52 24.97264088817012 24.637968264030587 25.081477025849935 25.307913821949363 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 4.0 6 8.0 7 8.0 8 8.0 9 63.0 10 118.0 11 2314.0 12 4510.0 13 7611.5 14 11631.0 15 12549.0 16 9852.5 17 7156.0 18 6594.5 19 6033.0 20 5794.0 21 5555.0 22 5817.0 23 6079.0 24 6496.5 25 6914.0 26 7836.5 27 8759.0 28 9977.0 29 11195.0 30 12675.0 31 14155.0 32 16185.5 33 18216.0 34 20203.0 35 22190.0 36 24857.0 37 27524.0 38 30217.5 39 37926.5 40 42942.0 41 44471.0 42 46000.0 43 48691.5 44 51383.0 45 54734.5 46 58086.0 47 64269.5 48 70453.0 49 71951.0 50 73449.0 51 80020.5 52 86592.0 53 92014.0 54 97436.0 55 104342.5 56 111249.0 57 122025.0 58 132801.0 59 139227.0 60 145653.0 61 136501.5 62 127350.0 63 129939.5 64 116898.0 65 101267.0 66 86774.5 67 72282.0 68 56163.0 69 40044.0 70 33901.5 71 27759.0 72 24573.0 73 21387.0 74 19675.0 75 17963.0 76 14199.5 77 10436.0 78 6549.0 79 2662.0 80 1721.5 81 781.0 82 658.0 83 535.0 84 349.5 85 164.0 86 85.0 87 6.0 88 4.5 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1665807.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.697437240535292 #Duplication Level Percentage of deduplicated Percentage of total 1 67.93135558404173 5.228973462726479 2 9.557789510218663 1.4714096982630942 3 4.126704699855179 0.9529515131207182 4 2.127852468452159 0.655160433321144 5 1.199252912258232 0.461558701381846 6 0.7315958818198177 0.33788480314452735 7 0.5087701599700417 0.2741358463358548 8 0.36980519589655725 0.22772418293100874 9 0.3097139134084039 0.21456030698835935 >10 5.162811568146366 11.536127154112597 >50 4.765730050786905 26.534793514143924 >100 3.083799458300971 41.283477948143656 >500 0.08815313402175809 4.452750276453203 >1k 0.03354499790208494 4.712942408126951 >5k 0.0031204649211241803 1.6555497508066515 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 9098 0.5461617102101264 No Hit CCATCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7083 0.4251993178081255 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6062 0.36390770359351354 No Hit CCATCTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5327 0.31978494507466954 No Hit CCATCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4490 0.2695390282307614 No Hit CCATCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4431 0.26599720135645966 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3954 0.23736243154218947 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 3947 0.23694221479439095 No Hit CCATCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3142 0.1886172887975618 No Hit CCATCTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2561 0.15373929873028508 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 2445 0.146775706909624 No Hit CCATCTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2388 0.14335394196326465 No Hit CCATCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2291 0.13753093845805667 No Hit CCATCTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2130 0.12786595325869082 No Hit CCATCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2099 0.12600499337558313 No Hit CCATCTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2092 0.1255847766277846 No Hit CCATCTGGGAGCACATATCTCCTAACCTTTGAAGAATCTCCATTTTCTTTTT 1907 0.11447904829310959 No Hit CCATCTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1858 0.11153753105851998 No Hit CCATCTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 1857 0.11147750009454878 No Hit CCATCTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1816 0.10901623057172889 No Hit CCATCTGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 1749 0.10499415598565741 No Hit CCATCTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1708 0.10253288646283752 No Hit CCATCTGGGGGGGCTGGAGAGACAGCTCAGTGGTTAAGAGCACTGACTGCTC 1697 0.10187254585915416 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005042600973582174 0.0 0.0 0.0 0.0 8 0.007984118208171775 0.0 0.0 0.0 0.0 9 0.008644458811855155 0.0 0.0 0.0 0.0 10 0.02317195209288951 0.0 0.0 0.0 0.0 11 0.038299755013636035 0.0 0.0 0.0 0.0 12 0.04760455442917457 0.0 0.0 0.0 0.0 13 0.055408579745432694 0.0 0.0 0.0 0.0 14 0.06603406036833799 0.0 0.0 0.0 0.0 15 0.07786016027066761 0.0 0.0 0.0 0.0 16 0.09106697234433521 0.0 0.0 0.0 0.0 17 0.10565449658934079 0.0 0.0 0.0 0.0 18 0.11934155637477811 0.0 0.0 0.0 0.0 19 0.1343492973675822 0.0 0.0 0.0 0.0 20 0.14923697643244385 0.0 0.0 0.0 0.0 21 0.16130320019065833 0.0 0.0 0.0 0.0 22 0.17499025997609566 0.0 0.0 0.0 0.0 23 0.19329970398731666 0.0 0.0 0.0 0.0 24 0.20932797136763143 0.0 0.0 0.0 0.0 25 0.22445577428837796 0.0 0.0 0.0 0.0 26 0.24732757156141139 0.0 0.0 0.0 0.0 27 0.26593717039248843 0.0 0.0 0.0 0.0 28 0.2911501752603993 0.0 0.0 0.0 0.0 29 0.30597782336128976 0.0 0.0 0.0 0.0 30 0.32470748412030925 0.0 0.0 0.0 0.0 31 0.3392349774013436 0.0 0.0 0.0 0.0 32 0.3555033686375432 0.0 0.0 0.0 0.0 33 0.3714716050538868 0.0 0.0 0.0 0.0 34 0.3902012658129063 0.0 0.0 0.0 0.0 35 0.4149340229690474 0.0 0.0 0.0 0.0 36 0.43360365276409574 0.0 0.0 0.0 0.0 37 0.4497519820723529 0.0 0.0 0.0 0.0 38 0.4665006210203223 0.0 0.0 0.0 0.0 39 0.48072795948150054 0.0 0.0 0.0 0.0 40 0.49459511215885155 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATA 20 6.312275E-4 46.0 24 TCCGATA 60 0.0 46.0 25 TAGGTCG 20 6.312275E-4 46.0 33 CGTTATA 25 3.4178214E-5 46.0 23 ACGATCT 30 1.8619103E-6 46.0 26 ACGGCTA 65 0.0 46.0 22 CTACGTT 25 3.4178214E-5 46.0 34 TTGCGTA 20 6.312275E-4 46.0 20 TTAACCG 30 1.8619103E-6 46.0 32 CGTACAC 30 1.8619103E-6 46.0 44 TCGTACT 25 3.4178214E-5 46.0 29 TCGTAAC 45 3.110472E-10 46.0 10 CGTAATT 25 3.4178214E-5 46.0 40 CATAACG 25 3.4178214E-5 46.0 22 ACGTAGG 25 3.4178214E-5 46.0 43 CGCAATT 20 6.312275E-4 46.0 44 CGCAATA 25 3.4178214E-5 46.0 29 ATCGGAT 20 6.312275E-4 46.0 43 GACGAAC 20 6.312275E-4 46.0 36 ATTGCCG 30 1.8619103E-6 46.0 44 >>END_MODULE