##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527682_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1676030 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.35834740428274 33.0 31.0 34.0 31.0 34.0 2 32.82671849549232 34.0 31.0 34.0 31.0 34.0 3 32.81154334946272 34.0 31.0 34.0 31.0 34.0 4 36.363532275675254 37.0 37.0 37.0 35.0 37.0 5 36.22134031013765 37.0 37.0 37.0 35.0 37.0 6 36.31072415171566 37.0 37.0 37.0 35.0 37.0 7 36.44805820898194 37.0 37.0 37.0 35.0 37.0 8 36.60663591940478 37.0 37.0 37.0 35.0 37.0 9 38.66643377505176 39.0 39.0 39.0 38.0 39.0 10 38.007160969672384 39.0 38.0 39.0 37.0 39.0 11 37.77508218826632 39.0 38.0 39.0 35.0 39.0 12 37.31229094944601 39.0 37.0 39.0 35.0 39.0 13 37.071264237513645 39.0 37.0 39.0 34.0 39.0 14 38.002686706085214 40.0 38.0 40.0 34.0 40.0 15 38.09288735881816 40.0 38.0 40.0 34.0 40.0 16 38.15670781549256 40.0 38.0 40.0 35.0 40.0 17 38.11555461417755 40.0 38.0 40.0 34.0 40.0 18 38.11477419855253 40.0 38.0 40.0 34.0 40.0 19 38.06925711353615 40.0 38.0 40.0 34.0 40.0 20 38.06258121871327 40.0 38.0 40.0 34.0 40.0 21 38.09971718883313 40.0 38.0 40.0 34.0 40.0 22 37.983451370202204 40.0 38.0 40.0 34.0 40.0 23 37.97500402737421 40.0 38.0 40.0 34.0 40.0 24 37.974224208397224 40.0 37.0 40.0 34.0 40.0 25 37.920145224130835 40.0 37.0 40.0 34.0 40.0 26 37.735139585806934 40.0 37.0 40.0 34.0 40.0 27 37.67235252352285 40.0 37.0 40.0 34.0 40.0 28 37.608153791996564 40.0 36.0 40.0 34.0 40.0 29 37.530102086478166 40.0 36.0 40.0 33.0 40.0 30 37.393284726407046 40.0 36.0 40.0 33.0 40.0 31 37.340299994630165 40.0 36.0 40.0 33.0 40.0 32 37.24459765040005 40.0 35.0 40.0 33.0 40.0 33 36.94535241015972 39.0 35.0 40.0 32.0 40.0 34 36.891235837067356 39.0 35.0 40.0 31.0 40.0 35 36.90835724897526 39.0 35.0 40.0 32.0 40.0 36 36.79759073524937 39.0 35.0 40.0 32.0 40.0 37 36.78804734998777 39.0 35.0 40.0 32.0 40.0 38 36.49708418107075 39.0 35.0 40.0 31.0 40.0 39 36.580498559095005 39.0 35.0 40.0 31.0 40.0 40 36.47137461739945 39.0 35.0 40.0 31.0 40.0 41 36.164432020906546 38.0 35.0 40.0 30.0 40.0 42 36.267559053238905 38.0 35.0 40.0 31.0 40.0 43 36.244827956540156 38.0 35.0 40.0 31.0 40.0 44 36.13344987858213 38.0 35.0 40.0 31.0 40.0 45 36.03121364176059 38.0 35.0 40.0 30.0 40.0 46 35.72120666097862 38.0 35.0 40.0 30.0 40.0 47 35.50344683567717 38.0 34.0 40.0 29.0 40.0 48 35.48972154436377 38.0 34.0 40.0 29.0 40.0 49 35.42114401293533 37.0 34.0 40.0 29.0 40.0 50 35.30670990376067 37.0 34.0 40.0 29.0 40.0 51 35.604206368621085 37.0 35.0 40.0 30.0 40.0 52 35.33422074783864 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 3.0 16 19.0 17 61.0 18 117.0 19 278.0 20 629.0 21 1040.0 22 1818.0 23 2864.0 24 4460.0 25 6257.0 26 8277.0 27 11557.0 28 15460.0 29 19066.0 30 25070.0 31 31901.0 32 42087.0 33 59480.0 34 109053.0 35 128827.0 36 160009.0 37 244357.0 38 521163.0 39 282176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 0.0 100.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 100.0 0.0 7 99.4481602357953 0.448798649188857 0.07219441179453828 0.030846703221302722 8 99.37733811447289 0.47236624642756997 0.0681372051812915 0.08215843391824729 9 97.77629278712195 1.3776603044098257 0.4144317225825313 0.4316151858856942 10 53.01116328466674 34.45385822449479 4.87318246093447 7.661796029904 11 34.43452682827873 22.704486196547794 24.82002112134031 18.040965853833164 12 30.52487127318723 17.885360047254526 27.38393704169973 24.20583163785851 13 25.07902603175361 17.9231278676396 28.293825289523454 28.704020811083335 14 23.9315525378424 19.883474639475427 29.084264601468945 27.100708221213228 15 25.204799436764258 23.305549423339677 27.122127885539044 24.367523254357025 16 30.368370494561553 22.321020506792838 25.17836792897502 22.13224106967059 17 29.881267041759397 22.484502067385428 22.889566415875613 24.744664474979565 18 28.562257238832238 23.243020709653166 24.963992291307434 23.230729760207154 19 29.733298329982162 23.464436794090798 22.44900150951952 24.353263366407525 20 30.050178099437364 24.38965889632047 22.787718596922492 22.77244440731968 21 30.4535121686366 22.441782068340068 24.031491083095172 23.073214679928164 22 27.196291235837066 22.63980954994839 25.2327225646319 24.931176649582646 23 26.764198731526285 24.254935770839424 25.41016568915831 23.570699808475982 24 27.615973461095567 25.268879435332302 23.80070762456519 23.31443947900694 25 26.223516285508015 25.745004564357437 22.416663186219818 25.61481596391473 26 25.4708447939476 26.914017052200734 22.527639720052743 25.087498433798917 27 24.019259798452293 23.245705625794287 24.46423990024045 28.270794675512967 28 25.18737731424855 25.797628920723376 23.07995680268253 25.935036962345542 29 28.304922942906753 25.00265508373955 22.0025894524561 24.689832520897596 30 26.783052809317255 24.38757062821071 24.187932196917718 24.641444365554317 31 28.961116447796282 24.167168845426396 22.272095368221333 24.599619338555993 32 30.426663007225407 24.316390518069486 22.158612912656693 23.098333562048413 33 28.93629588969171 23.97504817932853 23.828988741251646 23.25966718972811 34 26.66521482312369 25.429198761358684 25.94088411305287 21.964702302464755 35 25.784264004820916 27.922471554805107 24.794245926385567 21.499018513988414 36 26.156870700405122 28.268646742600072 22.728292452999053 22.846190103995752 37 27.26043089920825 28.64364003030972 21.52640465862783 22.569524411854204 38 27.894071108512374 28.231535235049492 21.297351479388794 22.577042177049336 39 28.0259303234429 26.04810176428823 21.912734258933313 24.01323365333556 40 25.796614619070063 26.73878152539036 21.803309009981923 25.66129484555766 41 24.587089729897436 27.269798273300598 22.580144746812408 25.56296724998956 42 23.748858910640024 25.533970155665468 22.71904440851297 27.998126525181533 43 23.863653991873655 24.90558044903731 24.591982243754586 26.638783315334454 44 25.09173463482157 23.953151196577625 24.50415565353842 26.45095851506238 45 25.946134615728834 24.96751251469246 23.241409759968498 25.844943109610206 46 24.785534865127712 26.837526774580407 23.910968180760488 24.465970179531393 47 25.478183564733325 25.649481214536735 23.908521923831913 24.963813296898028 48 25.69124657673192 25.63838356115344 24.732373525533554 23.937996336581087 49 26.804591803249345 25.25879608360232 23.78113756913659 24.155474544011742 50 24.941737319737715 24.870079891171397 24.80403095409987 25.38415183499102 51 23.42535634803673 25.222519883295647 25.194596755428005 26.15752701323962 52 25.00205843570819 24.58303252328419 25.058978657899917 25.3559303831077 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 2.0 6 4.0 7 5.0 8 6.0 9 68.5 10 131.0 11 2220.0 12 4309.0 13 7428.5 14 11561.5 15 12575.0 16 9910.0 17 7245.0 18 6695.5 19 6146.0 20 5831.5 21 5517.0 22 5742.5 23 5968.0 24 6558.5 25 7149.0 26 7904.5 27 8660.0 28 10006.0 29 11352.0 30 12734.5 31 14117.0 32 16123.0 33 18129.0 34 20407.0 35 22685.0 36 25027.5 37 27370.0 38 29961.0 39 37655.0 40 42758.0 41 44484.5 42 46211.0 43 49021.5 44 51832.0 45 55243.0 46 58654.0 47 64971.5 48 71289.0 49 73135.5 50 74982.0 51 80728.0 52 86474.0 53 92441.5 54 98409.0 55 105491.5 56 112574.0 57 122868.5 58 133163.0 59 139867.0 60 146571.0 61 137873.0 62 129175.0 63 130790.5 64 117293.5 65 102181.0 66 87371.5 67 72562.0 68 56281.0 69 40000.0 70 34163.5 71 28327.0 72 24949.0 73 21571.0 74 19591.5 75 17612.0 76 14109.5 77 10607.0 78 6668.0 79 2729.0 80 1767.0 81 805.0 82 649.0 83 493.0 84 327.0 85 161.0 86 87.0 87 13.0 88 9.5 89 3.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1676030.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.498116425473578 #Duplication Level Percentage of deduplicated Percentage of total 1 70.67586128057613 6.712875589135322 2 9.985130984840843 1.8967987323524393 3 3.8715619785902 1.1031763926325968 4 1.9225429657173092 0.7304214768543305 5 1.067982143864837 0.5071909371377548 6 0.6478492656328434 0.3692008650682983 7 0.4231037028472053 0.28130817607842123 8 0.3003611097031549 0.2282291831716005 9 0.23341905996911028 0.19953372667600874 >10 4.52828708223423 12.509185202507314 >50 3.8602127019570083 26.321253214183937 >100 2.3958381712782035 39.326625221140965 >500 0.058781686057243605 3.7243311566850443 >1k 0.026484056355461402 4.491554541268121 >5k 0.0025838103761425756 1.5983155851078548 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 8403 0.5013633407516571 No Hit CCATCTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6909 0.41222412486649995 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5630 0.335912841655579 No Hit CCATCTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5109 0.3048274792217323 No Hit CCATCTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4333 0.25852759198821024 No Hit CCATCTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4221 0.2518451340369802 No Hit CCATCTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3750 0.2237430117599327 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 3703 0.22093876601254153 No Hit CCATCTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2941 0.17547418602292322 No Hit CCATCTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2483 0.14814770618664344 No Hit CCATCTGGGGGGCTGGTGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCT 2338 0.13949630973192603 No Hit CCATCTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2234 0.1332911702057839 No Hit CCATCTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2146 0.1280406675298175 No Hit CCATCTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 2094 0.12493809776674641 No Hit CCATCTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2073 0.12368513690089081 No Hit CCATCTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2023 0.1207018967440917 No Hit CCATCTGGGAGCACATATCTCCTAACCTTTGAAGAATCTCCATTTTCTTTTT 1879 0.11211016509251029 No Hit CCATCTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1817 0.10841094729807939 No Hit CCATCTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 1769 0.10554703674755224 No Hit CCATCTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1745 0.10411508147228868 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005608491494782313 0.0 0.0 0.0 0.0 8 0.008353072439037488 0.0 0.0 0.0 0.0 9 0.009188379682941237 0.0 0.0 0.0 0.0 10 0.021658323538361484 0.0 0.0 0.0 0.0 11 0.036574524322357 0.0 0.0 0.0 0.0 12 0.044808267155122525 0.0 0.0 0.0 0.0 13 0.052087373137712334 0.0 0.0 0.0 0.0 14 0.06181273604887741 0.0 0.0 0.0 0.0 15 0.07416335029802569 0.0 0.0 0.0 0.0 16 0.0871106125785338 0.0 0.0 0.0 0.0 17 0.10262346139388913 0.0 0.0 0.0 0.0 18 0.11646569572143697 0.0 0.0 0.0 0.0 19 0.13006927083644088 0.0 0.0 0.0 0.0 20 0.1452837956361163 0.0 0.0 0.0 0.0 21 0.15542681216923324 0.0 0.0 0.0 0.0 22 0.1675984320089736 0.0 0.0 0.0 0.0 23 0.18424491208391258 0.0 0.0 0.0 0.0 24 0.19987709050553987 0.0 0.0 0.0 0.0 25 0.2147932912895354 0.0 0.0 0.0 0.0 26 0.2373465868749366 0.0 0.0 0.0 0.0 27 0.2532770893122438 0.0 0.0 0.0 0.0 28 0.28042457473911564 0.0 0.0 0.0 0.0 29 0.2969517252077827 0.0 0.0 0.0 0.0 30 0.3151494901642572 0.0 0.0 0.0 0.0 31 0.32917071890121297 0.0 0.0 0.0 0.0 32 0.3462348525981038 0.0 0.0 0.0 0.0 33 0.3603157461381956 0.0 0.0 0.0 0.0 34 0.37827485188212623 0.0 0.0 0.0 0.0 35 0.40405004683687046 0.0 0.0 0.0 0.0 36 0.4215318341557132 0.0 0.0 0.0 0.0 37 0.43805898462438025 0.0 0.0 0.0 0.0 38 0.45327350942405564 0.0 0.0 0.0 0.0 39 0.46824937501118713 0.0 0.0 0.0 0.0 40 0.482031944535599 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 40 5.6134013E-9 46.0 41 AAATCGC 30 1.8619176E-6 46.0 23 CGAAATA 20 6.312287E-4 46.0 24 CCGATTA 25 3.417831E-5 46.0 19 CGTGATA 20 6.312287E-4 46.0 42 ACCGATA 30 1.8619176E-6 46.0 40 CGATTAT 25 3.417831E-5 46.0 20 GCGCATT 20 6.312287E-4 46.0 12 CGTTATA 20 6.312287E-4 46.0 23 CTACGTT 30 1.8619176E-6 46.0 34 CGCTAAT 20 6.312287E-4 46.0 43 ATTGCCG 25 3.417831E-5 46.0 44 ATCGCGC 25 3.417831E-5 46.0 21 TCGGTAA 20 6.312287E-4 46.0 26 ATCGATC 65 0.0 46.0 43 TCCGATA 35 1.01994374E-7 45.999996 25 ATACGTT 35 1.01994374E-7 45.999996 23 ATCTGGG 170550 0.0 43.80991 3 CATCTGG 174495 0.0 43.702568 2 CCATCTG 175615 0.0 43.66614 1 >>END_MODULE