##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527664_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2862524 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.571594858243984 31.0 31.0 33.0 30.0 34.0 2 31.65221042688201 31.0 31.0 34.0 30.0 34.0 3 32.176870831475995 33.0 31.0 34.0 30.0 34.0 4 35.16962652540206 35.0 35.0 37.0 33.0 37.0 5 35.693515582751445 37.0 35.0 37.0 35.0 37.0 6 35.80128935163513 37.0 35.0 37.0 35.0 37.0 7 36.41153157143835 37.0 37.0 37.0 35.0 37.0 8 36.44087839962215 37.0 37.0 37.0 35.0 37.0 9 37.93380072970567 39.0 39.0 39.0 35.0 39.0 10 37.14303565664428 39.0 37.0 39.0 34.0 39.0 11 36.6520860611125 39.0 37.0 39.0 32.0 39.0 12 36.87004545638744 39.0 37.0 39.0 33.0 39.0 13 36.05632127451158 38.0 35.0 39.0 30.0 39.0 14 37.5116732645735 39.0 37.0 40.0 33.0 40.0 15 37.77861949803739 40.0 37.0 40.0 33.0 40.0 16 37.62037907804441 40.0 37.0 40.0 33.0 40.0 17 37.814541642270946 40.0 38.0 40.0 33.0 40.0 18 37.65798889371757 40.0 37.0 40.0 33.0 40.0 19 37.64623632849891 40.0 37.0 40.0 33.0 40.0 20 37.85458008387004 40.0 38.0 40.0 33.0 40.0 21 37.950225395490136 40.0 38.0 40.0 33.0 40.0 22 37.55417456761935 39.0 37.0 40.0 33.0 40.0 23 36.735114185942194 38.0 36.0 40.0 32.0 40.0 24 36.19758402025625 37.0 35.0 40.0 31.0 40.0 25 35.77127528013739 37.0 35.0 40.0 30.0 40.0 26 35.65730593001142 37.0 35.0 40.0 30.0 40.0 27 35.47150626510031 37.0 35.0 40.0 30.0 40.0 28 35.17494910086344 37.0 35.0 40.0 28.0 40.0 29 34.76686064466185 36.0 35.0 40.0 25.0 40.0 30 34.1226525961005 36.0 33.0 40.0 23.0 40.0 31 33.59565718924976 35.0 33.0 39.0 21.0 40.0 32 33.226594082704636 35.0 33.0 39.0 18.0 40.0 33 32.78745889990791 35.0 32.0 39.0 17.0 40.0 34 32.226683514269226 35.0 31.0 39.0 15.0 40.0 35 31.61273757006055 35.0 31.0 38.0 11.0 40.0 36 30.621667451521805 35.0 29.0 38.0 10.0 40.0 37 29.632674520807512 35.0 24.0 37.0 9.0 40.0 38 28.739111357668968 35.0 21.0 36.0 8.0 39.0 39 28.221718665066213 34.0 20.0 35.0 8.0 39.0 40 27.741917971692114 34.0 18.0 35.0 8.0 39.0 41 27.24487654950666 34.0 15.0 35.0 8.0 38.0 42 26.991455792161045 33.0 15.0 35.0 8.0 38.0 43 26.79459456060456 33.0 15.0 35.0 8.0 38.0 44 26.451500493969657 33.0 13.0 35.0 8.0 38.0 45 26.273933423789636 33.0 12.0 35.0 8.0 37.0 46 25.943776191920136 33.0 10.0 35.0 8.0 37.0 47 25.70721153778973 33.0 10.0 35.0 8.0 36.0 48 25.43256894964025 33.0 10.0 35.0 8.0 36.0 49 25.087784067487295 32.0 10.0 35.0 8.0 35.0 50 24.501541995805102 31.0 10.0 35.0 8.0 35.0 51 24.156256506495666 30.0 10.0 35.0 8.0 35.0 52 23.653352076698745 29.0 9.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 11.0 12 20.0 13 24.0 14 46.0 15 122.0 16 385.0 17 1010.0 18 2703.0 19 5895.0 20 11414.0 21 20609.0 22 34660.0 23 53656.0 24 73622.0 25 100037.0 26 134239.0 27 164656.0 28 163195.0 29 125856.0 30 96975.0 31 99145.0 32 123910.0 33 156052.0 34 213081.0 35 286783.0 36 452090.0 37 386472.0 38 134786.0 39 21067.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 98.53716510324455 0.9335816922408335 0.34553422084845403 0.18371898366616313 8 95.04025119090704 3.2945749974498026 0.8241677624362277 0.8410060492069237 9 81.10255145459043 13.449424354171354 3.3899453768771894 2.0580788143610325 10 35.53685488750487 47.405785942755415 9.30947653189982 7.747882637839893 11 18.732698835014133 61.68161384847778 12.766600384835202 6.819086931672887 12 41.12866826618746 38.29571385253014 13.51667269863938 7.0589451826430105 13 18.57532024185649 39.403931635158344 23.893493993412807 18.12725412957236 14 27.90533808624836 49.39085226883687 9.123347088094283 13.580462556820486 15 21.69857789838618 46.10990161130527 9.55481945304214 22.636701037266413 16 21.20632001688021 53.398259717647775 18.615669248537305 6.779751016934705 17 35.97217001499376 39.00791748820272 16.589205889627475 8.430706607176045 18 22.70104984272621 40.53960770285245 24.37303582432846 12.386306630092884 19 27.164732941977082 37.396332746904484 20.505644668830726 14.933289642287715 20 12.997550413551117 40.250387420332544 24.66585432995496 22.08620783616137 21 12.793779196261761 41.692296728341844 34.31614896503925 11.197775110357153 22 19.23526230697105 43.216755562573454 24.760595893693818 12.787386236761684 23 20.15284413335923 54.036298036278474 17.750942874190752 8.059914956171546 24 27.510965846923902 41.33995033753429 18.77430547307202 12.374778342469792 25 20.551338608864064 37.03581175214601 23.492833597203028 18.920016041786898 26 30.510696154861932 36.420026522048374 11.235399249054332 21.83387807403536 27 37.83147320336877 37.379564328543616 11.495903615131262 13.29305885295634 28 36.05999460615876 43.308422916279476 9.548880638206004 11.082701839355757 29 35.84207503587743 44.45129543018679 10.725814001908805 8.98081553202698 30 25.741967578263097 53.929818579687016 11.09646591609363 9.231747925956254 31 20.830882116621556 56.60434637403914 11.403293037892432 11.161478471446877 32 17.02906246375576 58.406462268962635 15.255872090504743 9.308603176776858 33 19.701703811042286 57.577892796706685 12.929882858624067 9.790520533626967 34 16.90012031340174 57.82941907211957 12.10484174106488 13.165618873413813 35 17.493722323376154 60.50660186604549 12.131880815671764 9.867794994906593 36 21.09830345527234 55.93591529712939 11.806154289012074 11.159626958586198 37 19.722070452509744 54.525935852415564 14.616017193218292 11.135976501856405 38 22.69291017298021 51.307552355892916 13.891342046389829 12.108195424737051 39 20.99213840652515 49.722377873513025 14.709536059785 14.575947660176821 40 22.193840121515137 48.17280134594505 16.790741317802052 12.84261721473776 41 21.71188783046011 48.20232074910114 17.30958412925097 12.776207291187777 42 21.416833535718826 50.963869647905135 14.949988192238736 12.6693086241373 43 24.03109982658661 48.825896306895594 14.791212230884351 12.351791635633449 44 21.829231824781207 49.251255185982714 16.09380392967884 12.82570905955723 45 21.406737550497393 48.49594274144077 14.63645370309559 15.460866004966247 46 22.925292504097783 48.20525522231429 14.919874907599029 13.949577365988898 47 23.33367335959454 47.375602789705866 14.840923604483317 14.449800246216277 48 23.072575112033995 47.090644480186015 15.153654606913339 14.683125800866648 49 22.342589966057925 46.906855628110016 15.493040407696146 15.257513998135911 50 19.840672078207902 47.785381013399366 16.6729082446121 15.701038663780636 51 18.903142820811283 47.418012914476876 17.72603478608389 15.952809478627952 52 20.240109777245536 44.75134531623141 18.55404531106115 16.454499595461908 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 337.0 6 674.0 7 1787.5 8 2901.0 9 17441.5 10 31982.0 11 43642.0 12 55302.0 13 36671.5 14 16048.5 15 14056.0 16 15475.0 17 16894.0 18 19300.0 19 21706.0 20 24566.0 21 27426.0 22 32732.5 23 38039.0 24 46654.0 25 55269.0 26 67804.5 27 80340.0 28 94322.0 29 108304.0 30 122664.0 31 137024.0 32 166155.5 33 195287.0 34 233508.0 35 271729.0 36 258022.0 37 244315.0 38 193138.5 39 128406.0 40 114850.0 41 113570.5 42 112291.0 43 111023.5 44 109756.0 45 105716.5 46 101677.0 47 90249.5 48 78822.0 49 75770.0 50 72718.0 51 78771.5 52 84825.0 53 99125.0 54 113425.0 55 134633.0 56 155841.0 57 152271.0 58 148701.0 59 137369.0 60 126037.0 61 106118.0 62 86199.0 63 63657.5 64 31457.0 65 21798.0 66 17099.5 67 12401.0 68 10012.0 69 7623.0 70 6754.5 71 5886.0 72 4507.5 73 3129.0 74 2775.5 75 2422.0 76 1778.5 77 1135.0 78 688.0 79 241.0 80 266.5 81 292.0 82 165.0 83 38.0 84 26.0 85 14.0 86 13.5 87 13.0 88 12.0 89 11.0 90 11.0 91 5.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2862524.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.77832528102743 #Duplication Level Percentage of deduplicated Percentage of total 1 81.1696973335106 29.852855314943977 2 9.001420875178763 6.621143698775104 3 3.472698774772679 3.8316013542484506 4 1.6952887751944794 2.4939952807750863 5 0.9572094295350848 1.7602279880754028 6 0.6085348273145201 1.3428535094284366 7 0.4316110526610274 1.1111752182757748 8 0.33439668828460956 0.9838840139703764 9 0.25535326299491407 0.8452318831198825 >10 1.6914954100728758 11.909522907691317 >50 0.21125918670701466 5.4885412116309915 >100 0.14496570838536438 10.240100990713477 >500 0.013812507108590756 3.5763977402988636 >1k 0.010797100627137842 7.7672976711060135 >5k 4.863558841053081E-4 1.1594941198442175 >10k+ 9.727117682106162E-4 11.015677097102582 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAA 74838 2.6144060276874534 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAA 42863 1.4973848254198043 No Hit TAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 41092 1.4355163485092177 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAA 36984 1.292006634704198 No Hit TAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 26090 0.9114334063225321 No Hit TAGTCGGGGGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAA 24117 0.8425082200184173 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAA 22034 0.7697402711732723 No Hit TAGTCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGTCGGGGAAG 14643 0.5115415626209597 No Hit TAGTCGGGGGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAA 14031 0.49016182921086426 No Hit TAGTCGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 11226 0.3921713844145936 Illumina Single End Adapter 2 (97% over 34bp) TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGTAAAAAAAAAAAAAAAAAAAAA 7538 0.2633340366753257 No Hit TAGTCGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 7045 0.2461114736505266 Illumina Single End Adapter 2 (97% over 34bp) TAGTCGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 6813 0.23800673810944467 Illumina Single End Adapter 2 (97% over 34bp) TAGTCGGGGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAA 5745 0.20069700725653303 No Hit TAGTCGGGGCAGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAA 5270 0.18410325992026616 No Hit TAGTCGGGGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 4864 0.1699199727233728 No Hit TAGTCGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 4652 0.16251392128066 Illumina Single End Adapter 2 (97% over 34bp) TAGTCGGGGGAGTGCAGTGCTTAGTCGGGCAAAAAAAAAAAAAAAAAAAAAA 4651 0.16247898707574154 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGATCGGAAGAGCTCGTATGCCGTC 4384 0.15315155436251365 Illumina Single End Adapter 2 (96% over 25bp) TAGTCGGGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAAAA 3944 0.13778050419839274 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGTAAAAAAAAAAAAAAAAAAAAAA 3868 0.13512550462459005 No Hit TAGTCGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 3814 0.1332390575589934 Illumina Single End Adapter 2 (100% over 34bp) TAGTCGGGGGAGTGCAGTGCTTAGTCGGAAGAGCTCGTATGCCGTCTTCTGC 3630 0.12681116385399738 Illumina Single End Adapter 2 (96% over 29bp) TAGTCGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAGTCGGGGGAG 3623 0.12656662441956817 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGGAAAAAAAAAAAAAAAAAAAAA 3619 0.12642688759989434 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGCAAAAAAAAAAAAAAAAAAAAA 3531 0.12335267756707016 No Hit TAGTCGGGGCAGAGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAA 3518 0.12289853290313024 No Hit TAGTCGGGGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3377 0.11797281000962787 No Hit TAGTCGGGGTGCAGTGCTTAGTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAA 3189 0.11140517948495803 No Hit TAGTCGGGGAGTGCAGTGCTTAGTCGGGGTAAAAAAAAAAAAAAAAAAAAAA 3119 0.10895978514066608 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGAAAAAAAAAAAAAAAAAAAAAAAAA 3086 0.10780695637835701 No Hit TAGTCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3059 0.10686373284555868 No Hit TAGTCGGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 2971 0.1037895228127345 Illumina Single End Adapter 2 (100% over 34bp) TAGTCGGGAGAGTGCAGTGCTTAGTCGGGGAAAAAAAAAAAAAAAAAAAAAA 2968 0.10368472019797913 No Hit TAGTCGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2925 0.1021825493864855 No Hit TAGTCGGGGGAGTGCAGTGCTTAGTCGGGGGAGTGCAGTGCTTAGTCGGGGA 2922 0.10207774677173012 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.08370235498462196 0.0 0.0 0.0 0.0 8 0.12803386102614336 0.0 0.0 0.0 3.493420491845658E-5 9 0.22295009578958988 0.0 0.0 0.0 3.493420491845658E-5 10 0.4763977524729924 0.0 0.0 0.0 3.493420491845658E-5 11 0.8269974330346226 0.0 0.0 0.0 3.493420491845658E-5 12 0.9973016820120985 0.0 0.0 0.0 3.493420491845658E-5 13 1.1155190314561554 0.0 0.0 0.0 3.493420491845658E-5 14 1.3715867535084423 0.0 0.0 0.0 3.493420491845658E-5 15 1.6110956624293804 0.0 0.0 0.0 3.493420491845658E-5 16 1.8920714725885268 0.0 0.0 0.0 3.493420491845658E-5 17 2.0761397983038745 0.0 0.0 0.0 3.493420491845658E-5 18 2.266251741470115 0.0 0.0 0.0 1.0480261475536974E-4 19 2.4708264454725968 0.0 0.0 0.0 1.0480261475536974E-4 20 2.6808159512374394 0.0 0.0 0.0 1.0480261475536974E-4 21 2.903032428723742 0.0 0.0 0.0 1.0480261475536974E-4 22 3.135100351997049 0.0 0.0 0.0 1.0480261475536974E-4 23 3.4021374143937306 0.0 0.0 0.0 1.0480261475536974E-4 24 3.6376288897490467 0.0 0.0 0.0 1.0480261475536974E-4 25 3.8477930665384816 0.0 0.0 0.0 1.0480261475536974E-4 26 4.072944017237934 0.0 0.0 0.0 1.0480261475536974E-4 27 4.260505763445128 0.0 0.0 0.0 1.0480261475536974E-4 28 4.515839867194127 0.0 0.0 0.0 1.0480261475536974E-4 29 4.66787352699925 0.0 0.0 0.0 1.0480261475536974E-4 30 4.860291127690108 0.0 0.0 0.0 1.0480261475536974E-4 31 5.022176233282236 0.0 0.0 0.0 1.746710245922829E-4 32 5.189336403817051 0.0 0.0 0.0 1.746710245922829E-4 33 5.338819866663127 0.0 0.0 0.0 1.746710245922829E-4 34 5.489770566115777 0.0 0.0 0.0 1.746710245922829E-4 35 5.735288158282691 0.0 0.0 0.0 1.746710245922829E-4 36 5.905382802030656 0.0 0.0 0.0 1.746710245922829E-4 37 6.083302707680355 0.0 0.0 0.0 1.746710245922829E-4 38 6.274532545403986 0.0 0.0 0.0 2.4453943442919606E-4 39 6.479386723045815 0.0 0.0 0.0 2.4453943442919606E-4 40 6.710406620171569 0.0 0.0 0.0 2.4453943442919606E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTT 20 6.313038E-4 46.000004 23 TACGGCA 20 6.313038E-4 46.000004 28 CTAACGA 20 6.313038E-4 46.000004 20 TAACCGC 20 6.313038E-4 46.000004 25 AACGTCA 25 3.418441E-5 46.0 46 ACACGCG 30 1.8623832E-6 46.0 20 CACGCGC 30 1.8623832E-6 46.0 21 CTAGCGT 35 1.02028935E-7 45.999996 23 CACGTGA 60 1.8189894E-12 42.166668 41 CGCTGAT 50 8.731149E-10 41.4 20 CGACATA 45 1.5897967E-8 40.88889 24 TACACGT 45 1.5897967E-8 40.88889 29 ATTCTCG 45 1.5897967E-8 40.88889 19 GAAGCAG 13435 0.0 40.45329 9 TAGCGTC 40 2.9126022E-7 40.250004 24 CGAGGGT 80 0.0 40.250004 5 TAACTAG 40 2.9126022E-7 40.250004 15 AAGCAGT 13640 0.0 39.94648 10 TACGAAC 75 0.0 39.866665 23 AGTACGA 75 0.0 39.866665 21 >>END_MODULE