##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527663_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2331636 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43428476829145 33.0 31.0 34.0 31.0 34.0 2 32.863752318114834 34.0 31.0 34.0 31.0 34.0 3 33.09582027383348 34.0 31.0 34.0 31.0 34.0 4 35.55800862570315 35.0 35.0 37.0 35.0 37.0 5 36.17740504950172 37.0 35.0 37.0 35.0 37.0 6 36.46651321218235 37.0 37.0 37.0 35.0 37.0 7 36.52014208049627 37.0 37.0 37.0 35.0 37.0 8 36.67251534973727 37.0 37.0 37.0 35.0 37.0 9 38.770708206598286 39.0 39.0 39.0 39.0 39.0 10 38.312573231842364 39.0 39.0 39.0 37.0 39.0 11 38.01799208795884 39.0 38.0 39.0 37.0 39.0 12 37.21659470003036 39.0 35.0 39.0 35.0 39.0 13 37.03637059987065 39.0 35.0 39.0 34.0 39.0 14 37.674795722831526 40.0 36.0 40.0 33.0 40.0 15 37.77445021435593 40.0 36.0 40.0 33.0 40.0 16 37.85309799642826 40.0 36.0 40.0 34.0 40.0 17 37.59597681627836 40.0 36.0 40.0 33.0 40.0 18 37.54805810169341 40.0 36.0 40.0 33.0 40.0 19 37.48944346373104 40.0 36.0 40.0 33.0 40.0 20 37.38401620149972 40.0 35.0 40.0 33.0 40.0 21 37.3884019632567 40.0 35.0 40.0 33.0 40.0 22 37.55855116321759 40.0 35.0 40.0 33.0 40.0 23 37.591139869173404 40.0 35.0 40.0 34.0 40.0 24 37.57542986984246 40.0 35.0 40.0 34.0 40.0 25 37.55608980132405 40.0 35.0 40.0 34.0 40.0 26 37.47573248997699 40.0 35.0 40.0 34.0 40.0 27 37.36985061133041 40.0 35.0 40.0 34.0 40.0 28 37.19127728341817 39.0 35.0 40.0 33.0 40.0 29 37.28200370898374 40.0 35.0 40.0 33.0 40.0 30 37.36415160857012 40.0 35.0 40.0 33.0 40.0 31 37.3856227987559 40.0 35.0 40.0 33.0 40.0 32 37.40014993764035 40.0 35.0 40.0 34.0 40.0 33 37.33004251092366 40.0 35.0 40.0 33.0 40.0 34 36.88219258923777 40.0 35.0 40.0 32.0 40.0 35 36.862725142346406 40.0 35.0 40.0 32.0 40.0 36 36.89913734390788 39.0 35.0 40.0 33.0 40.0 37 36.85455319784049 39.0 35.0 40.0 33.0 40.0 38 36.749122933425284 39.0 35.0 40.0 33.0 40.0 39 36.62930234393362 39.0 35.0 40.0 32.0 40.0 40 36.419029814259176 39.0 35.0 40.0 32.0 40.0 41 36.21028325175971 38.0 35.0 40.0 31.0 40.0 42 36.133332990226606 38.0 35.0 40.0 31.0 40.0 43 36.03800121459782 38.0 35.0 40.0 31.0 40.0 44 35.71457294363271 37.0 35.0 40.0 30.0 40.0 45 35.66786925575004 37.0 35.0 40.0 30.0 40.0 46 35.51827129105915 37.0 35.0 40.0 30.0 40.0 47 35.42347733522728 36.0 35.0 40.0 30.0 40.0 48 35.32616969372578 36.0 35.0 40.0 30.0 40.0 49 35.248624142018734 36.0 35.0 40.0 30.0 40.0 50 34.54701462835537 35.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 3.0 14 13.0 15 36.0 16 82.0 17 155.0 18 359.0 19 574.0 20 1045.0 21 1618.0 22 2505.0 23 3793.0 24 5716.0 25 7772.0 26 10266.0 27 13820.0 28 18335.0 29 24796.0 30 34605.0 31 47406.0 32 61405.0 33 85442.0 34 212211.0 35 216454.0 36 182507.0 37 335611.0 38 692429.0 39 372676.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.6082578927414 0.3429351751302519 0.03512555132962435 0.013681380798718154 8 99.6699313271883 0.2803610855210676 0.02762009164380718 0.02208749564683338 9 99.53114465551226 0.32556539700021786 0.06373207481785322 0.079557872669662 10 72.2649247138061 18.12208252059927 3.273709961589202 6.339282804005427 11 43.55581231375738 25.800425109236603 15.099784014314412 15.543978562691604 12 37.9323359220736 14.204103899579524 23.136587357546375 24.7269728208005 13 27.160457292647738 15.80967183556953 26.632416037494703 30.39745483428803 14 25.29146916585608 16.476585539080716 31.385945319080683 26.845999975982526 15 28.085215702622534 17.872601040642706 28.804367405547005 25.23781585118775 16 34.33593408233532 17.97656237937654 24.196058046796328 23.49144549149181 17 33.269901476902916 19.171002677948014 23.74367182527633 23.81542401987274 18 32.93592996505458 18.225829417627796 24.104148331900863 24.734092285416764 19 30.834186811320464 22.36403966999995 22.019002966157668 24.78277055252192 20 32.277551041414696 22.016558330717146 22.16936948992038 23.536521137947773 21 30.750254327862496 22.392817746852426 23.422952810816096 23.433975114468982 22 28.667810927606197 20.574780969242198 27.43459956871484 23.322808534436763 23 31.9742018050845 18.58875055969285 25.215213695448174 24.221833939774477 24 33.59894082952914 18.755371764717992 22.54820220651937 25.0974851992335 25 29.923838883942434 20.495308873254658 21.229299942186515 28.35155230061639 26 26.738092909871007 19.575782840889403 25.224391800435402 28.461732448804188 27 26.494444244298855 18.226172524356286 24.271026866972374 31.008356364372485 28 27.035437778452554 22.451488997424985 21.269786536148867 29.243286687973598 29 32.31825207708236 21.039433256305873 20.52820423084907 26.1141104357627 30 30.357783118805852 18.48200147879 24.810090425778295 26.350124976625857 31 33.931196807735 18.19387760353674 23.059688562022547 24.81523702670571 32 35.68914701951763 18.593082282140095 22.164437330698274 23.553333367644004 33 35.83938487825716 18.43675427896979 22.22495277993649 23.498908062836566 34 30.738460034070496 19.37034768720332 28.09568045784162 21.795511820884563 35 28.4407171616839 25.82632966723794 24.748288326308224 20.984664844769938 36 29.034592020366816 27.626524894966455 21.523085078459932 21.8157980062068 37 31.663261332386362 25.191110447771436 19.441670998389114 23.70395722145309 38 30.39020670464858 26.050163919239537 20.519026125861842 23.04060325025004 39 32.991942138481306 22.57423542954389 20.22798584341638 24.20583658855842 40 30.658687719695525 21.040505464832417 20.341382617183815 27.95942419828824 41 25.976953521047026 24.465954377098313 21.813267594084156 27.74382450777051 42 25.22520667891558 22.205395696412307 21.915427622493393 30.653970002178728 43 25.63161659881731 19.346373104549766 23.969521829307833 31.05248846732509 44 26.480462645112702 18.410206395852526 23.876840124273258 31.232490834761517 45 29.71312846430575 20.1948331557756 22.412932378810417 27.679106001108234 46 27.48117630710797 23.99499750389855 21.819229073491744 26.704597115501734 47 25.877366793101498 21.600584310758624 24.141632741988886 28.38041615415099 48 27.72606873457092 20.38714447709677 26.18637729045186 25.70040949788046 49 30.807252933133643 19.766593070273405 23.46734224381507 25.958811752777876 50 26.619935530245716 20.79231063510771 23.98551918052389 28.602234654122682 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.5 4 11.0 5 17.5 6 24.0 7 16.0 8 8.0 9 114.0 10 220.0 11 1354.0 12 2488.0 13 3632.5 14 4777.0 15 4809.0 16 4841.0 17 4584.0 18 4327.0 19 4775.0 20 5223.0 21 4954.0 22 4685.0 23 4987.0 24 5289.0 25 6146.5 26 7004.0 27 8181.5 28 9359.0 29 10982.0 30 12605.0 31 14168.5 32 15732.0 33 20406.0 34 25080.0 35 26978.0 36 28876.0 37 31066.0 38 33256.0 39 36231.5 40 39207.0 41 42948.0 42 46689.0 43 50290.0 44 53891.0 45 60267.5 46 66644.0 47 75283.5 48 83923.0 49 90707.0 50 97491.0 51 108553.0 52 119615.0 53 130794.0 54 141973.0 55 161849.0 56 181725.0 57 209060.5 58 236396.0 59 246146.0 60 255896.0 61 271466.0 62 287036.0 63 237391.5 64 187747.0 65 154656.0 66 121565.0 67 101658.5 68 81752.0 69 74006.0 70 66260.0 71 55982.0 72 45704.0 73 37012.0 74 28320.0 75 22225.5 76 16131.0 77 10824.5 78 5518.0 79 4273.0 80 3028.0 81 2030.0 82 1032.0 83 622.0 84 212.0 85 128.0 86 44.0 87 34.5 88 25.0 89 14.5 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2331636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.665563013983995 #Duplication Level Percentage of deduplicated Percentage of total 1 63.202701594834664 4.844842917292318 2 10.231679563082405 1.5686316885940084 3 4.049536581233815 0.9312593352264337 4 2.013077576084779 0.6172549204606412 5 1.1823226792327952 0.45315845002606886 6 0.7847747754859512 0.3609444295963621 7 0.6025459148154787 0.3233197575185679 8 0.5150881025931099 0.3158752246544749 9 0.41501429517575544 0.28631864082365166 >10 10.305374972011764 22.61533217978304 >50 4.421148593804951 23.30484351778849 >100 2.1444132421575683 28.02275364179106 >500 0.0800747529513287 4.171699112932149 >1k 0.047704108141217096 6.740244747415 >5k 0.003407436295801221 2.134737335651937 >10k+ 0.0011358120986004069 3.3087841004458087 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 49327 2.11555319955602 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 26679 1.1442180511880928 No Hit TCGTAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 9944 0.4264816635186624 No Hit TCGTAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 9863 0.42300770789265557 No Hit TCGTAAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 9254 0.39688870818601185 No Hit TCGTAAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 7832 0.3359014871961147 No Hit TCGTAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 6956 0.298331300425967 No Hit TCGTAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 5188 0.2225047134286827 No Hit TCGTAAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 4590 0.1968574854737189 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 4331 0.18574940513870947 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 4104 0.17601375171767805 No Hit TCGTAAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 3664 0.1571428816504806 No Hit TCGTAAGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAA 3643 0.15624222648818253 No Hit TCGTAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 3544 0.15199628072306312 No Hit TCGTAAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3472 0.14890832016661262 No Hit TCGTAAGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 3437 0.14740722822944918 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 3405 0.1460348013154712 No Hit TCGTAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3331 0.14286106407689708 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 3155 0.1353127160500181 No Hit TCGTAAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 2910 0.12480507248987405 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTG 2753 0.11807160294316953 No Hit TCGTAAGGGGGCTGTGACAGCCACACACCCCAAGGCCTCCAAGATGAGCT 2630 0.1127963369925666 No Hit TCGTAAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2482 0.10644886251541835 No Hit TCGTAAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 2438 0.10456177550869862 No Hit TCGTAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAAAGTGCTTGCCTAGC 2414 0.1035324553232151 No Hit TCGTAAGGGGCCGGGCAGTGGTGGCACACGCCTTTAATCTCAGCACTTGA 2400 0.10293201854834975 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGCAGGTAAGAGCACCCGACTGC 2370 0.10164536831649537 No Hit TCGTAAGGGGAGCATTCGCAGACTGCAGCTCCCAGACACCGCCCGCATCC 2334 0.10010138803827012 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.018270433292332078 0.0 0.0 0.0 0.0 7 0.018356209974455705 0.0 0.0 0.0 0.0 8 0.02817764007761074 0.0 0.0 0.0 0.0 9 0.06133032771839172 0.0 0.0 0.0 0.0 10 0.07591236367940793 0.0 0.0 0.0 0.0 11 0.10713507597240736 0.0 0.0 0.0 0.0 12 0.11991580160882745 0.0 0.0 0.0 0.0 13 0.1311096586259605 0.0 0.0 0.0 0.0 14 0.14140286048079545 0.0 0.0 0.0 0.0 15 0.15083829551439418 0.0 0.0 0.0 0.0 16 0.16211792921365084 0.0 0.0 0.0 0.0 17 0.17193935931680587 0.0 0.0 0.0 0.0 18 0.1810316876219101 0.0 0.0 0.0 0.0 19 0.19424129666894832 0.0 0.0 0.0 0.0 20 0.20715068732855385 0.0 0.0 0.0 0.0 21 0.21658612236215258 0.0 0.0 0.0 0.0 22 0.22422024707115518 0.0 0.0 0.0 0.0 23 0.23314102201201217 0.0 0.0 0.0 0.0 24 0.2433055588436617 0.0 0.0 0.0 0.0 25 0.25179745037390056 0.0 0.0 0.0 0.0 26 0.2605895602915721 0.0 0.0 0.0 0.0 27 0.2700249953251708 0.0 0.0 0.0 0.0 28 0.2785597751964715 0.0 0.0 0.0 0.0 29 0.2886385353459974 0.0 0.0 0.0 0.0 30 0.29880307217764696 0.0 0.0 0.0 0.0 31 0.30780962380062754 0.0 0.0 0.0 0.0 32 0.3183172673607716 0.0 0.0 0.0 0.0 33 0.32693782391419585 0.0 0.0 0.0 0.0 34 0.33701658406372176 0.0 0.0 0.0 0.0 35 0.34941131463058556 0.0 0.0 0.0 0.0 36 0.3635644671809837 0.0 0.0 0.0 0.0 37 0.37467254751599305 0.0 0.0 0.0 0.0 38 0.38552329780463157 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 20 7.8581483E-4 44.000004 24 AACCGTT 25 4.444253E-5 44.0 29 ATTCACG 45 4.802132E-10 44.0 33 TCGTAAG 240205 0.0 42.538246 1 CGTAAGG 239320 0.0 42.53468 2 CGATGCG 150 0.0 42.533333 22 GTAAGGG 238525 0.0 42.485523 3 TAAGGGG 172605 0.0 42.442455 4 TAAGGGA 43370 0.0 42.38183 4 AAGGGGG 84885 0.0 42.286858 5 AGGGGGG 41735 0.0 41.965256 6 AAGGGAT 12410 0.0 41.74859 5 AAGGGGT 18325 0.0 41.69495 5 AAGGGGA 45765 0.0 41.509888 5 AAGGGGC 25985 0.0 41.273815 5 TAAGGGT 7830 0.0 41.134098 4 AGGGGGT 13205 0.0 41.117756 6 AAGGGAG 16130 0.0 41.108494 5 CGTAAAG 820 0.0 41.04878 2 AGGGGGC 20095 0.0 41.033096 6 >>END_MODULE