##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527661_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3522743 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.109290118524115 33.0 31.0 34.0 31.0 34.0 2 32.55850455170871 34.0 31.0 34.0 31.0 34.0 3 32.846475317671484 34.0 31.0 34.0 31.0 34.0 4 35.510126341887556 35.0 35.0 37.0 35.0 37.0 5 35.97512733685086 37.0 35.0 37.0 35.0 37.0 6 36.238185981776134 37.0 37.0 37.0 35.0 37.0 7 36.369260828848425 37.0 36.0 37.0 35.0 37.0 8 36.55293020240193 37.0 37.0 37.0 35.0 37.0 9 38.64169852867496 39.0 39.0 39.0 38.0 39.0 10 38.012409647822736 39.0 38.0 39.0 37.0 39.0 11 37.6998353271868 39.0 38.0 39.0 35.0 39.0 12 36.86770053904017 39.0 35.0 39.0 33.0 39.0 13 36.53128967966156 39.0 35.0 39.0 33.0 39.0 14 37.324011714734795 40.0 35.0 40.0 33.0 40.0 15 37.47258798044592 40.0 36.0 40.0 33.0 40.0 16 37.58446443581039 40.0 36.0 40.0 33.0 40.0 17 37.424640684829974 40.0 36.0 40.0 33.0 40.0 18 37.456695819138666 40.0 35.0 40.0 33.0 40.0 19 37.38852536219645 40.0 35.0 40.0 33.0 40.0 20 37.37318646293527 40.0 35.0 40.0 33.0 40.0 21 37.4204096069455 40.0 35.0 40.0 33.0 40.0 22 37.32937231015717 40.0 35.0 40.0 33.0 40.0 23 37.375119615595004 40.0 35.0 40.0 33.0 40.0 24 37.38146580661717 40.0 35.0 40.0 33.0 40.0 25 37.33155810685026 40.0 35.0 40.0 33.0 40.0 26 37.16659375946528 39.0 35.0 40.0 33.0 40.0 27 37.076492948818576 39.0 35.0 40.0 33.0 40.0 28 36.956089331523756 39.0 35.0 40.0 32.0 40.0 29 36.898359602162294 39.0 35.0 40.0 32.0 40.0 30 36.694078733532365 39.0 35.0 40.0 32.0 40.0 31 36.59733111385077 39.0 35.0 40.0 31.0 40.0 32 36.549588204419116 38.0 35.0 40.0 31.0 40.0 33 36.3044113635312 38.0 35.0 40.0 31.0 40.0 34 36.00738884443174 38.0 35.0 40.0 30.0 40.0 35 35.99672755009377 38.0 34.0 40.0 30.0 40.0 36 35.95393703145532 38.0 35.0 40.0 30.0 40.0 37 36.01454690279705 38.0 35.0 40.0 30.0 40.0 38 35.625739657988106 38.0 34.0 40.0 30.0 40.0 39 35.70130094644997 38.0 34.0 40.0 30.0 40.0 40 35.528330054165174 37.0 34.0 40.0 29.0 40.0 41 35.11619808768338 37.0 34.0 40.0 28.0 40.0 42 35.186003634099905 37.0 34.0 40.0 29.0 40.0 43 35.186854959331406 36.0 34.0 40.0 29.0 40.0 44 35.00922832009034 36.0 34.0 40.0 28.0 40.0 45 34.8672957408474 36.0 34.0 40.0 28.0 40.0 46 34.51456719948063 35.0 33.0 40.0 26.0 40.0 47 34.264819772546566 35.0 33.0 39.0 26.0 40.0 48 34.22470415809499 35.0 33.0 39.0 26.0 40.0 49 34.17308954981956 35.0 33.0 39.0 26.0 40.0 50 34.03300240749893 35.0 33.0 39.0 26.0 40.0 51 34.41983022888698 35.0 33.0 39.0 27.0 40.0 52 34.123918208055485 35.0 33.0 39.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 0.0 13 1.0 14 15.0 15 38.0 16 114.0 17 292.0 18 628.0 19 1143.0 20 2099.0 21 3565.0 22 5806.0 23 8494.0 24 12471.0 25 17378.0 26 22970.0 27 30724.0 28 40800.0 29 53547.0 30 70612.0 31 92893.0 32 124280.0 33 181864.0 34 366876.0 35 323410.0 36 362857.0 37 567479.0 38 924513.0 39 307873.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 0.0 100.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.64138740748332 0.33434173313239146 0.016833473233784015 0.007437386150508284 8 99.70227745821934 0.2584633622151829 0.023589572103329706 0.015669607462139586 9 99.51637119142667 0.32301533208638833 0.07922803338194129 0.08138544310498949 10 72.21758726083623 18.182308502209786 3.2922356243415996 6.307868612612387 11 43.537436594154045 25.830070487685308 15.0203122964122 15.61218062174845 12 37.965273084071136 14.252217661066958 23.130299315050802 24.652209939811108 13 27.43086850218707 15.794680452136303 26.51939128116925 30.255059764507376 14 25.241466663903665 16.41947766271908 31.404533342341466 26.934522331035787 15 28.24299132806452 17.827386215798313 28.777234104219353 25.15238835191781 16 34.47966541981632 17.892080120519722 24.168098552747104 23.460155906916853 17 33.287866869652426 19.12586299937293 23.723246345248576 23.863023785726067 18 32.946683876740366 18.23749277196775 24.04004493089618 24.775778420395696 19 30.838383611861552 22.37287818044064 22.006061753582365 24.782676454115443 20 32.257334696286385 22.016195901886686 22.190662219753186 23.535807182073743 21 30.813885656716938 22.419887002827057 23.35132026378308 23.41490707667292 22 28.81865069350787 20.533799939422206 27.363193965611455 23.284355401458466 23 32.02089962282233 18.593351828390546 25.16873924666091 24.217009302126215 24 33.58025266106554 18.689697204706672 22.578570165351262 25.15147996887653 25 29.924578659300437 20.476344712061028 21.1692990377101 28.429777590928435 26 26.873461958479517 19.542981137142277 25.21526549055665 28.368291413821563 27 26.413507882919646 18.12059522934259 24.28173159381766 31.184165293920106 28 27.026694822756014 22.50924918451332 21.270044394382445 29.19401159834822 29 32.37017290219582 21.057198893021717 20.450966760845173 26.121661443937295 30 30.413544218241295 18.468591095064273 24.738449554792954 26.379415131901474 31 33.99893208218709 18.242914683245417 23.016694660950286 24.741458573617205 32 35.808033682843174 18.55718682855945 22.12298768317757 23.51179180541981 33 35.88839719502672 18.434299635255822 22.185722886966207 23.491580282751254 34 30.676577882632937 19.31364280618825 28.126037011499278 21.88374229967954 35 28.484223799465358 25.7556114652701 24.788467396003625 20.97169733926091 36 29.203947037862253 27.569396915982804 21.554623769034528 21.672032277120415 37 31.696833972844455 25.139131636909077 19.423897797824026 23.740136592422438 38 30.471765893793556 25.997440063041783 20.47620277721083 23.05459126595383 39 33.03465509689467 22.519496880697798 20.189494379805737 24.256353642601802 40 30.66908372254235 21.020948732280498 20.31167189885836 27.998295646318795 41 26.253235050073197 24.439421212390457 21.777858901429937 27.52948483610641 42 25.35271519949085 22.104450991741377 21.846157951346438 30.696675857421337 43 25.65725061408113 19.22569997300399 23.919599017016 31.19745039589888 44 26.34069530476677 18.36784573839193 23.85598381715612 31.43547513968518 45 29.7523549120671 20.113048269487727 22.410547689683863 27.72404912876131 46 27.664266169856845 23.948780822217234 21.81788452918649 26.56906847873944 47 26.092905443286668 21.614179632178672 24.112829122079017 28.180085802455647 48 27.781958547643132 20.20669688365004 26.211335882293994 25.800008686412834 49 30.86132028365396 19.64897808327204 23.523402076166214 25.966299556907785 50 26.649914569413664 20.71425590796717 23.98744387541186 28.648385647207302 51 25.043524321813997 20.320187989870394 25.62193722335124 29.014350464964377 52 24.857419346231048 21.288098507327955 25.17944113436603 28.675041012074963 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 6.0 4 12.0 5 23.0 6 34.0 7 28.5 8 23.0 9 164.5 10 306.0 11 1895.0 12 3484.0 13 5094.5 14 6592.5 15 6480.0 16 6264.5 17 6049.0 18 6420.5 19 6792.0 20 6745.5 21 6699.0 22 6846.0 23 6993.0 24 7847.5 25 8702.0 26 9541.5 27 10381.0 28 13452.5 29 16524.0 30 17820.5 31 19117.0 32 22460.0 33 25803.0 34 32009.5 35 38216.0 36 41186.0 37 44156.0 38 48361.0 39 55804.0 40 59042.0 41 62976.5 42 66911.0 43 74288.5 44 81666.0 45 90698.0 46 99730.0 47 111104.5 48 122479.0 49 130715.5 50 138952.0 51 159306.0 52 179660.0 53 193676.0 54 207692.0 55 236979.5 56 266267.0 57 298714.0 58 331161.0 59 350803.0 60 370445.0 61 400605.0 62 430765.0 63 348842.5 64 243012.0 65 219104.0 66 175894.5 67 132685.0 68 119406.0 69 106127.0 70 92843.0 71 79559.0 72 65705.0 73 51851.0 74 40552.5 75 29254.0 76 22015.5 77 14777.0 78 10285.5 79 5794.0 80 3946.0 81 2098.0 82 1312.0 83 526.0 84 332.5 85 139.0 86 92.5 87 46.0 88 42.0 89 22.5 90 7.0 91 6.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3522743.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.878147653546738 #Duplication Level Percentage of deduplicated Percentage of total 1 67.19481846938021 5.293707014550468 2 10.314715112596755 1.6252169732261443 3 4.419285041839379 1.0444734024816333 4 2.2934180292564 0.7227154346315237 5 1.2796383779981453 0.5040590042507221 6 0.8320013509355618 0.3932777694372427 7 0.5484410724293057 0.3024489823507314 8 0.4134175598847151 0.26055716634726295 9 0.3326400630230063 0.23585287787823025 >10 5.578342156157826 12.224743576451894 >50 4.080189437658596 22.900024656476443 >100 2.564291348155435 35.71290418475729 >500 0.09229489941201538 4.918933237066647 >1k 0.05123308702054731 7.593372994149969 >5k 0.002636997126057582 1.2401577332213367 >10k+ 0.002636997126057582 5.027554992722476 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 69175 1.9636686525244675 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 37210 1.0562791551924169 No Hit TCGTAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 14254 0.4046278709516987 No Hit TCGTAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 13650 0.3874821410474735 No Hit TCGTAAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 13545 0.3845015091932622 No Hit TCGTAAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 11179 0.31733793807836674 No Hit TCGTAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 10390 0.2949406187167216 No Hit TCGTAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 7541 0.21406614107245406 No Hit TCGTAAGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 6465 0.1835217613092979 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 6086 0.17276309966409698 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 5875 0.1667734489856342 No Hit TCGTAAGGGGAGACGTTCTCGCCCAGAGTCGCCGCGGTTTCCTGCTTCAACA 5373 0.1525231900255 No Hit TCGTAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 5278 0.14982642787168976 No Hit TCGTAAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 5169 0.146732248137318 No Hit TCGTAAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 4995 0.14179291535033922 No Hit TCGTAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4785 0.13583165164191655 No Hit TCGTAAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4734 0.13438391616987103 No Hit TCGTAAGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 4536 0.12876329610192966 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 4428 0.125697503337598 No Hit TCGTAAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 4321 0.12266009754330646 No Hit TCGTAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCT 4053 0.11505238957255752 No Hit TCGTAAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 3760 0.10673500735080589 No Hit TCGTAAGGGGGCTGTGACAGCCACACACCCCAAGGCCTCCAAGATGAGCTAC 3580 0.10162535274358647 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.015697994432179695 0.0 0.0 0.0 0.0 7 0.01589670322246045 0.0 0.0 0.0 0.0 8 0.024441181204532945 0.0 0.0 0.0 0.0 9 0.053935243076205105 0.0 0.0 0.0 0.0 10 0.06631196201369217 0.0 0.0 0.0 0.0 11 0.09149120443926792 0.0 0.0 0.0 0.0 12 0.10168212668366668 0.0 0.0 0.0 0.0 13 0.10985757405521776 0.0 0.0 0.0 0.0 14 0.11726657323568594 0.0 0.0 0.0 0.0 15 0.12544202060723703 0.0 0.0 0.0 0.0 16 0.13446907707999137 0.0 0.0 0.0 0.0 17 0.14358129446286602 0.0 0.0 0.0 0.0 18 0.15255157699554012 0.0 0.0 0.0 0.0 19 0.16543926139374912 0.0 0.0 0.0 0.0 20 0.17554502272802755 0.0 0.0 0.0 0.0 21 0.18394756585989952 0.0 0.0 0.0 0.0 22 0.19192430444116984 0.0 0.0 0.0 0.0 23 0.20061071727344287 0.0 0.0 0.0 0.0 24 0.20943906495591647 0.0 0.0 0.0 0.0 25 0.21764289929750766 0.0 0.0 0.0 0.0 26 0.2259602815192593 0.0 0.0 0.0 0.0 27 0.2335679894900082 0.0 0.0 0.0 0.0 28 0.24262343293280264 0.0 0.0 0.0 0.0 29 0.25119629788491527 0.0 0.0 0.0 0.0 30 0.2590594885860252 0.0 0.0 0.0 0.0 31 0.26652526170657354 0.0 0.0 0.0 0.0 32 0.27475748301820485 0.0 0.0 0.0 0.0 33 0.28185422552823186 0.0 0.0 0.0 0.0 34 0.2891496768285396 0.0 0.0 0.0 0.0 35 0.2997096296834597 0.0 0.0 0.0 0.0 36 0.3119444137707463 0.0 0.0 0.0 0.0 37 0.3230437190564285 0.0 0.0 0.0 0.0 38 0.3335752849413085 0.0 0.0 0.0 0.0 39 0.34345395051526606 0.0 0.0 0.0 0.0 40 0.3538719685199857 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCACG 50 1.6370905E-11 46.0 33 TCGTAAG 363435 0.0 44.427364 1 CGTAAGG 362475 0.0 44.42003 2 GTAAGGG 361410 0.0 44.3651 3 TAAGGGA 67085 0.0 44.27204 4 TAAGGGG 261185 0.0 44.25641 4 AAGGGGG 126755 0.0 44.05302 5 AAGGGAT 19370 0.0 44.052658 5 AGGGGGG 62280 0.0 43.58478 6 AAGGGGT 27810 0.0 43.36174 5 AAGGGGA 70275 0.0 43.293346 5 CGATGCG 245 0.0 43.183674 22 TAAGGGT 12070 0.0 43.14167 4 AGGGGGC 29230 0.0 43.112213 6 AAGGGGC 40095 0.0 43.06871 5 AAGGGAG 24305 0.0 42.85826 5 AGGGGGT 20475 0.0 42.8547 6 AGGGGAG 35395 0.0 42.72496 6 TAAGGGC 23045 0.0 42.706444 4 AGGGGAT 10665 0.0 42.139706 6 >>END_MODULE