##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527658_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10605088 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.845759412840327 33.0 31.0 34.0 30.0 34.0 2 32.27832960933469 34.0 31.0 34.0 30.0 34.0 3 32.40340165022676 34.0 31.0 34.0 30.0 34.0 4 35.91351047723508 37.0 35.0 37.0 35.0 37.0 5 36.07132350056878 37.0 35.0 37.0 35.0 37.0 6 36.14323539795238 37.0 35.0 37.0 35.0 37.0 7 36.32895578047066 37.0 35.0 37.0 35.0 37.0 8 36.458198555259514 37.0 37.0 37.0 35.0 37.0 9 38.43558459863794 39.0 39.0 39.0 37.0 39.0 10 37.58589725988129 39.0 37.0 39.0 35.0 39.0 11 37.214200297064956 39.0 37.0 39.0 34.0 39.0 12 36.17385984915919 38.0 35.0 39.0 31.0 39.0 13 35.70722854916433 38.0 35.0 39.0 30.0 39.0 14 36.73657295441584 39.0 35.0 40.0 31.0 40.0 15 37.10922125304382 40.0 36.0 40.0 32.0 40.0 16 37.10554575313284 40.0 35.0 40.0 32.0 40.0 17 37.194877968009315 40.0 35.0 40.0 32.0 40.0 18 37.2107364879952 40.0 35.0 40.0 32.0 40.0 19 36.993398734645105 40.0 35.0 40.0 32.0 40.0 20 37.11028121595974 40.0 35.0 40.0 32.0 40.0 21 37.15778803532795 40.0 35.0 40.0 32.0 40.0 22 37.088992472292546 40.0 35.0 40.0 32.0 40.0 23 37.1038100768235 40.0 35.0 40.0 32.0 40.0 24 36.802674621841895 39.0 35.0 40.0 32.0 40.0 25 36.29774246097722 37.0 35.0 40.0 31.0 40.0 26 35.5897964260174 37.0 35.0 40.0 30.0 40.0 27 35.322054941929764 36.0 35.0 40.0 30.0 40.0 28 35.18418300725086 36.0 35.0 40.0 29.0 40.0 29 35.0768056804432 36.0 35.0 40.0 28.0 40.0 30 34.73477004622687 36.0 35.0 40.0 25.0 40.0 31 34.50776485777393 35.0 34.0 40.0 24.0 40.0 32 34.07117706142561 35.0 34.0 40.0 22.0 40.0 33 33.640994020983136 35.0 33.0 40.0 20.0 40.0 34 33.442404626911156 35.0 33.0 40.0 19.0 40.0 35 33.19351739466943 35.0 33.0 40.0 18.0 40.0 36 32.632886308911345 35.0 32.0 40.0 15.0 40.0 37 32.04660781692712 35.0 31.0 40.0 11.0 40.0 38 31.20664533853939 35.0 29.0 40.0 10.0 40.0 39 30.620047377258917 35.0 25.0 40.0 9.0 40.0 40 29.96147254977988 35.0 23.0 39.0 8.0 40.0 41 29.195530107812402 35.0 19.0 39.0 8.0 40.0 42 28.862215193310984 35.0 18.0 39.0 8.0 40.0 43 28.51475206994982 35.0 17.0 39.0 8.0 40.0 44 28.21041645293278 35.0 15.0 38.0 8.0 40.0 45 28.05751220546213 35.0 15.0 38.0 8.0 40.0 46 27.721330082315205 34.0 15.0 38.0 8.0 40.0 47 27.38784128901146 34.0 13.0 37.0 8.0 40.0 48 27.266505002127282 34.0 13.0 37.0 8.0 40.0 49 27.06579455069114 33.0 12.0 36.0 8.0 40.0 50 26.64008153444837 33.0 10.0 36.0 8.0 40.0 51 26.249782180025285 33.0 10.0 35.0 8.0 40.0 52 25.766485294605758 33.0 10.0 35.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 7.0 11 26.0 12 52.0 13 94.0 14 251.0 15 1076.0 16 4265.0 17 9661.0 18 17700.0 19 29317.0 20 45198.0 21 67571.0 22 99064.0 23 148937.0 24 211877.0 25 279789.0 26 370433.0 27 473876.0 28 577513.0 29 595786.0 30 481983.0 31 382855.0 32 389918.0 33 453779.0 34 662796.0 35 745416.0 36 1101496.0 37 1340654.0 38 1710145.0 39 403551.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.19976147298354 0.5449365436665872 0.17142714893077737 0.08387483441910147 8 97.80587393522808 1.481449281703273 0.4668325241619872 0.2458442589066682 9 95.38292374377279 2.638742837400312 1.1898156809259857 0.7885177379009018 10 63.86439226152579 23.610996910162367 4.93412218738779 7.590488640924055 11 47.06855803553916 30.76650566218781 10.959965631591176 11.204970670681845 12 34.14925929893274 36.9135833667764 14.12807701359951 14.80908032069135 13 22.857217214982093 43.82174857954974 15.339052349212 17.981981856256166 14 21.702969367156594 50.399930674785544 13.060080218099085 14.837019739958782 15 24.667065468952263 49.6916762972641 12.06539728854678 13.575860945236853 16 22.446452118077662 50.98198147907872 15.769223225681861 10.802343177161756 17 26.076587011819228 50.88618783738522 11.6240053830765 11.413219767719042 18 23.70706400550377 50.20459990525302 13.707345002700592 12.38099108654261 19 21.18052202867152 50.39491421476182 16.54276701900069 11.881796737565969 20 21.73640614769062 51.20929689598049 12.220539801272748 14.83375715505614 21 19.738619802117626 47.59758712044634 17.679212091403674 14.984580986032364 22 18.92975334103781 49.528518763823556 15.09219914063891 16.449528754499728 23 19.287383565322607 50.93614499002743 14.913398172650712 14.863073271999253 24 18.541458590442623 48.90710949310369 19.094070695122944 13.457361221330743 25 19.86299406473572 49.9385577941456 15.447858612771531 14.750589528347149 26 19.700713468855703 50.38267480665885 16.23429244528664 13.682319279198815 27 17.532131746572965 49.93635130609006 18.915694051760816 13.61582289557616 28 21.062720083039384 51.619967698523574 15.460390333394688 11.85692188504235 29 22.72500709093597 49.298977999993966 15.169558234688859 12.806456674381202 30 21.504743760730697 49.40752023934172 14.98745696405348 14.1002790358741 31 24.8461493200245 47.43810706709836 14.325812289346395 13.389931323530742 32 23.608441532969834 47.38194534547945 16.6034265816559 12.406186539894813 33 25.642672649203853 46.09792016813062 14.927994939787393 13.331412242878136 34 24.09940398420079 44.56112952575217 17.136029422858158 14.203437067188881 35 24.85546560292569 45.452522411883805 17.005243143668398 12.686768841522106 36 26.149061657951357 43.51218962068019 16.582521521745033 13.756227199623424 37 24.580031773427997 43.68019388429403 18.003631841621683 13.736142500656289 38 26.571792709310856 42.783859973627756 16.2724533733242 14.371893943737197 39 24.965224239534834 41.96346131215507 16.335555159938327 16.73575928837177 40 24.562898487971058 41.559975739946715 18.73426227109101 15.142863500991222 41 24.50285183866461 41.650715203871954 18.32059290785706 15.525840049606376 42 25.466200751940953 41.73714541548358 18.057417345334617 14.739236487240841 43 25.88333071823638 41.199808997341655 18.395905814265756 14.52095447015621 44 25.365220920373314 44.52176162988935 15.758926281422653 14.354091168314682 45 24.3843521147585 45.40510177756186 15.888411298425812 14.322134809253823 46 23.624877040152803 46.438841431584535 15.636956525018933 14.299325003243727 47 24.6833312462848 44.63272723432375 15.759388323793258 14.92455319559819 48 24.083854844014496 44.93793922313516 16.02841013671928 14.949795796131065 49 23.632618607219477 45.17396743902549 16.06521322595343 15.1282007278016 50 21.06404020409826 46.2418510812923 16.571734246806816 16.122374467802626 51 20.10195483526398 45.661620158173136 17.610707237884306 16.62571776867858 52 21.58760021604724 43.629510665069446 18.065790684622325 16.717098434260986 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2789.0 1 2519.5 2 2250.0 3 4250.5 4 6251.0 5 41328.5 6 76406.0 7 90947.0 8 105488.0 9 170874.0 10 236260.0 11 187954.5 12 139649.0 13 115698.0 14 95321.0 15 98895.0 16 114651.0 17 130407.0 18 155725.0 19 181043.0 20 210312.5 21 239582.0 22 278035.5 23 316489.0 24 354232.5 25 391976.0 26 419322.0 27 446668.0 28 456830.0 29 466992.0 30 455495.5 31 443999.0 32 454424.0 33 464849.0 34 504570.5 35 544292.0 36 532077.5 37 519863.0 38 523973.5 39 551107.0 40 574130.0 41 613928.5 42 653727.0 43 674830.0 44 695933.0 45 656415.5 46 616898.0 47 602102.0 48 587306.0 49 547962.0 50 508618.0 51 434861.0 52 361104.0 53 321529.0 54 281954.0 55 249078.5 56 216203.0 57 205079.5 58 193956.0 59 169953.5 60 145951.0 61 130069.5 62 114188.0 63 93786.5 64 61142.0 65 48899.0 66 42550.5 67 36202.0 68 34690.0 69 33178.0 70 25710.0 71 18242.0 72 12428.0 73 6614.0 74 4631.5 75 2649.0 76 1851.0 77 1053.0 78 797.5 79 542.0 80 364.5 81 187.0 82 138.0 83 89.0 84 73.0 85 57.0 86 40.0 87 23.0 88 22.0 89 10.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1.0605088E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.21585555028576 #Duplication Level Percentage of deduplicated Percentage of total 1 78.50319406352621 24.505443661230846 2 10.298799127770295 6.42971651827773 3 3.9833423879122023 3.73030321765193 4 1.8766037905790762 2.343191714073406 5 1.023723277269363 1.597819897335279 6 0.6424689523442481 1.2033130807152883 7 0.47206968220345835 1.0315241306532723 8 0.3708344138146591 0.9260730795770635 9 0.27068588283024325 0.7604722276137404 >10 1.9621532520987048 12.491135812847267 >50 0.3470603400002356 7.5960529618838954 >100 0.216473678296358 12.531140286362735 >500 0.01797039513138723 3.8208383281489606 >1k 0.012409213287347658 7.371051868675071 >5k 0.0010443397199123804 2.3194198829130324 >10k+ 0.0011672032163726606 11.342503332040389 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATAAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 151642 1.4298985543542873 No Hit AATAAAGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 73031 0.6886411503610343 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 69396 0.6543651500110136 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAATAAAGGGAAG 68418 0.6451431614711731 No Hit AATAAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 61114 0.5762705599425483 No Hit AATAAAGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 53232 0.5019477443280056 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 52435 0.4944324837285651 No Hit AATAAAGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 49484 0.46660621769475175 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 48363 0.45603581978763397 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 46993 0.44311749228294944 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAA 41452 0.3908689866599881 No Hit AATAAAGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 30829 0.2907000865999415 No Hit AATAAAGGGGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAAA 29856 0.281525245240775 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAA 28665 0.27029478680422075 No Hit AATAAAGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 28289 0.2667493188175336 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 27538 0.2596678122802941 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGACGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAA 26528 0.2501440817841398 No Hit AATAAAGGGCGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAA 24964 0.2353964436693029 No Hit AATAAAGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 23059 0.217433367832497 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGAACGCAGAGTGCAGTG 20343 0.19182301929036327 No Hit AATAAAGGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAA 17858 0.16839087049536977 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGGAGTGCAGTGCTAATAAAGGGGAGTGCAGTGCTAATAAAGGGG 15855 0.14950370991735287 No Hit AATAAAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 15054 0.14195073157337307 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 13661 0.128815527037588 Illumina Single End Adapter 2 (97% over 34bp) AATAAAGGGCAGAGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAA 13612 0.1283534846669825 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGAAAAAAAAAAAAAAA 13047 0.12302585325081697 No Hit AATAAAGGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12779 0.1204987643666889 No Hit AATAAAGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 12432 0.11722675002791114 No Hit AATAAAGGGCAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAA 12172 0.1147750966328615 Illumina Single End Adapter 2 (100% over 34bp) AATAAAGGGAGAGTGCAGTGCTAATAAAGGGAGAGTGCAGTGCTAATAAAGG 12146 0.11452993129335656 No Hit AATAAAGGGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11803 0.11129563469911802 No Hit AATAAAGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11763 0.11091845725372576 No Hit AATAAAGGGGTGCAGTGCTAATAAAGGGGGAAAAAAAAAAAAAAAAAAAAAA 11631 0.10967377168393133 No Hit AATAAAGGGGCAGAGTGCAGTGCTAATAAAGGGGCAGAGTGCAGTGCTAATA 11222 0.10581713230479559 No Hit AATAAAGGGAACGCAGAGTGCAGTGCTAATAAAGGGGGGAAAAAAAAAAAAA 11142 0.10506277741401109 No Hit AATAAAGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10653 0.10045178314409084 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.4207791580795935 0.0 0.0 0.0 0.0 7 0.42649339637728606 0.0 0.0 0.0 0.0 8 0.8555610288193742 0.0 0.0 0.0 0.0 9 1.9330344076352786 0.0 0.0 0.0 0.0 10 2.985368909715789 0.0 0.0 0.0 0.0 11 3.917072635323724 0.0 0.0 0.0 0.0 12 4.387516633525342 0.0 0.0 0.0 9.429436134806237E-6 13 4.796942750498628 0.0 0.0 0.0 9.429436134806237E-6 14 5.153639460606079 0.0 0.0 0.0 9.429436134806237E-6 15 5.472080948314621 0.0 0.0 0.0 9.429436134806237E-6 16 5.738811408259885 0.0 0.0 0.0 1.8858872269612474E-5 17 5.99622558530396 0.0 0.0 0.0 1.8858872269612474E-5 18 6.228010554933632 0.0 0.0 0.0 1.8858872269612474E-5 19 6.455175100857249 0.0 0.0 0.0 1.8858872269612474E-5 20 6.681330697114442 0.0 0.0 0.0 1.8858872269612474E-5 21 6.917594648908147 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 22 7.173660416584945 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 23 7.4831816577099595 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 24 7.775126429879696 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 25 8.079301180716275 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 26 8.388247226237066 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 27 8.684416385795195 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 28 8.961010035937466 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 29 9.174454752284941 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 30 9.402439659152286 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 31 9.554366734156284 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 32 9.72022108633139 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 33 9.872949663406848 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 34 10.01935108883585 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 35 10.189439257835485 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 36 10.328891188833135 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 37 10.463062635595291 1.8858872269612474E-5 0.0 0.0 2.828830840441871E-5 38 10.59623456212716 1.8858872269612474E-5 0.0 0.0 5.657661680883742E-5 39 10.728274956322851 1.8858872269612474E-5 0.0 0.0 5.657661680883742E-5 40 10.863002739816963 1.8858872269612474E-5 0.0 0.0 5.657661680883742E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 25 3.4190725E-5 46.0 39 AGGGATT 6055 0.0 40.492157 6 AAGCAGT 32835 0.0 40.3612 10 TACGTAC 40 2.9136027E-7 40.25 38 GGAAGCA 39620 0.0 40.21227 8 GAAGCAG 36080 0.0 40.03326 9 AAGGGAT 28455 0.0 39.59023 5 AAGGGAC 40375 0.0 38.75963 5 GGGAAGC 43745 0.0 38.72328 7 TACGCGT 60 1.2369128E-10 38.333332 43 AGGGGTG 41845 0.0 38.260963 6 AGGGACG 22635 0.0 38.15551 6 AGGGCGC 22255 0.0 37.62885 6 AAGGGGT 86165 0.0 37.56502 5 AGGGACT 4170 0.0 37.28537 6 AGGGTAT 8815 0.0 37.15485 6 AGGGGTC 8075 0.0 37.08483 6 AGGGATC 14150 0.0 36.94629 6 AAGGGTG 17670 0.0 36.88851 5 AGGGATG 6385 0.0 36.670322 6 >>END_MODULE