##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527657_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 794328 Sequences flagged as poor quality 0 Sequence length 50 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.838868830004735 33.0 31.0 34.0 3.0 34.0 2 30.345544913436264 34.0 31.0 34.0 16.0 34.0 3 32.41712365672619 34.0 31.0 34.0 28.0 34.0 4 36.10612366679759 37.0 35.0 37.0 35.0 37.0 5 36.37575787332185 37.0 37.0 37.0 35.0 37.0 6 36.34309252600941 37.0 37.0 37.0 35.0 37.0 7 36.54951355107713 37.0 37.0 37.0 35.0 37.0 8 36.67813673948294 37.0 37.0 37.0 35.0 37.0 9 38.74116863562659 39.0 39.0 39.0 39.0 39.0 10 38.31782336767683 39.0 39.0 39.0 37.0 39.0 11 38.12418421609209 39.0 39.0 39.0 37.0 39.0 12 37.73848712370708 39.0 37.0 39.0 35.0 39.0 13 37.62420939460777 39.0 37.0 39.0 35.0 39.0 14 38.345835725292325 40.0 38.0 40.0 35.0 40.0 15 38.452699640450795 40.0 38.0 40.0 35.0 40.0 16 38.49711076532616 40.0 38.0 40.0 35.0 40.0 17 38.40784537369953 40.0 38.0 40.0 35.0 40.0 18 38.379714677060356 40.0 38.0 40.0 35.0 40.0 19 38.38405545316292 40.0 38.0 40.0 35.0 40.0 20 38.30518878851054 40.0 38.0 40.0 34.0 40.0 21 38.30507422626421 40.0 38.0 40.0 35.0 40.0 22 38.29949970289351 40.0 38.0 40.0 35.0 40.0 23 38.224491645768495 40.0 38.0 40.0 35.0 40.0 24 38.18958666948666 40.0 38.0 40.0 35.0 40.0 25 38.12635586306916 40.0 38.0 40.0 35.0 40.0 26 38.03056671803084 40.0 38.0 40.0 34.0 40.0 27 37.930581573355084 40.0 37.0 40.0 34.0 40.0 28 37.81709570857379 40.0 37.0 40.0 34.0 40.0 29 37.77610130827568 40.0 37.0 40.0 34.0 40.0 30 37.905969574281656 40.0 38.0 40.0 34.0 40.0 31 37.93671883655115 40.0 37.0 40.0 34.0 40.0 32 37.94221404759747 40.0 37.0 40.0 34.0 40.0 33 37.86789084609884 40.0 37.0 40.0 34.0 40.0 34 37.549477042229405 40.0 37.0 40.0 33.0 40.0 35 37.54365702833086 40.0 36.0 40.0 33.0 40.0 36 37.54567886313966 40.0 36.0 40.0 33.0 40.0 37 37.451136054627305 40.0 36.0 40.0 33.0 40.0 38 37.35164692671038 40.0 36.0 40.0 33.0 40.0 39 37.22948706327865 40.0 35.0 40.0 33.0 40.0 40 37.04566627388182 40.0 35.0 40.0 33.0 40.0 41 36.88906345993091 40.0 35.0 40.0 33.0 40.0 42 36.85853702752515 40.0 35.0 40.0 32.0 40.0 43 36.769495724688035 40.0 35.0 40.0 32.0 40.0 44 36.401904502925746 39.0 35.0 40.0 31.0 40.0 45 36.37552748990341 39.0 35.0 40.0 31.0 40.0 46 36.222979675902145 39.0 35.0 40.0 31.0 40.0 47 36.16930033940639 39.0 35.0 40.0 31.0 40.0 48 36.09159062754932 39.0 35.0 40.0 31.0 40.0 49 36.02323725211751 38.0 35.0 40.0 31.0 40.0 50 35.5355533230605 37.0 35.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 4.0 15 5.0 16 20.0 17 54.0 18 88.0 19 142.0 20 261.0 21 473.0 22 784.0 23 1238.0 24 1763.0 25 2327.0 26 3223.0 27 4118.0 28 5710.0 29 7422.0 30 10034.0 31 13529.0 32 17045.0 33 24305.0 34 41618.0 35 56663.0 36 63214.0 37 134830.0 38 227284.0 39 178172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 0.0 100.0 6 0.0 100.0 0.0 0.0 7 99.25320522504558 0.5662648175564754 0.07515786929328942 0.10537208810466206 8 98.7163992708302 1.0102879415052723 0.21036649847418196 0.06294628919035965 9 97.61836420219355 1.5875054133808704 0.36773222145008105 0.42639816297549626 10 58.02162330926267 26.297323020213316 6.665886132680707 9.01516753784331 11 33.175715825200676 23.94464251543443 21.938292493780907 20.941349165583993 12 29.834400902398002 17.029992647873424 28.891717275483174 24.2438891742454 13 23.28131451994642 19.29114924816952 28.39368623540905 29.03384999647501 14 23.163101388846925 19.41477576013939 33.4008117553454 24.02131109566829 15 24.82324681995347 20.497703719370335 30.813089806729714 23.86595965394648 16 27.9937255138935 19.527575510368514 26.68973018702601 25.78896878871197 17 27.505262309776313 19.75833660654037 24.937934958858303 27.798466124825012 18 27.952684533341394 22.266872123354585 24.008847730408597 25.771595612895425 19 29.753829652234344 22.210346355661642 22.226712390851134 25.809111601252884 20 29.500659677110715 23.12709611143004 22.75495764973663 24.61728656172261 21 28.954789457251916 21.119361271414327 25.996691543040157 23.9291577282936 22 27.511556938695346 20.371937033567995 26.347805944143982 25.768700083592673 23 28.203084871740643 22.282356910495412 24.947251009658476 24.56730720810547 24 28.769097904140356 21.507991660875607 23.693738606721656 26.02917182826238 25 26.73568097813498 23.23536372883746 23.80125086865879 26.227704424368774 26 27.0822632464171 21.997713790776608 23.605487909276775 27.314535053529525 27 25.041922228600775 21.64106011622403 24.239860611737214 29.077157043437975 28 25.834290116929026 23.71224481574362 22.560831293873562 27.892633773453788 29 28.471613741426715 22.3575147797887 22.48315557301266 26.687715905771924 30 27.80199111701967 21.293093029579722 24.94951707606933 25.95539877733128 31 28.783323765497375 22.05801633582097 23.57363708694645 25.585022811735204 32 32.17361090129015 21.760783958264092 22.588527661117322 23.47707747932844 33 31.514815038623844 20.898671581512925 23.10078456254847 24.48572881731476 34 27.06690435185465 23.398772295575633 26.117296633128884 23.417026719440837 35 27.640596831535586 25.339909961627942 25.0489722129901 21.97052099384637 36 28.35868809861921 25.594212969957 22.481393076915328 23.565705854508465 37 29.16591131119638 25.327572488946632 21.703376942522485 23.8031392573345 38 28.853320039077058 25.092153367374685 22.739472862595804 23.315053730952453 39 28.054783414408153 23.332301014190612 21.942824626602615 26.670090944798623 40 28.18155724083754 23.471664098458067 22.74941837628788 25.597360284416514 41 25.179396924192528 25.738989435094823 23.284335941827557 25.797277698885097 42 25.33059391082777 23.659747610558863 23.2076673615937 27.80199111701967 43 26.519271635898523 22.19108479116939 23.811196382350868 27.478447190581225 44 26.221283902871356 21.473622986977674 23.893530128611857 28.411562981539113 45 27.181844275916244 22.446898510439013 22.863854730035953 27.507402483608782 46 26.093125258079787 25.026941011773474 22.394904875567775 26.485028854578964 47 25.291818996686505 24.027731617165703 24.928870693214893 25.751578692932892 48 26.897578833932585 22.525707264505343 24.948635828020667 25.62807807354141 49 27.650542345227663 24.35895499088538 23.005609773292647 24.984892890594313 50 24.843137847337623 24.16835362721697 24.39042813548056 26.59808038996485 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 109.5 4 219.0 5 166.5 6 114.0 7 95.5 8 77.0 9 184.0 10 291.0 11 766.0 12 1241.0 13 1510.0 14 1779.0 15 1672.0 16 1565.0 17 1653.0 18 1741.0 19 1864.5 20 1988.0 21 1848.5 22 1709.0 23 2463.0 24 3217.0 25 3645.0 26 4073.0 27 4598.5 28 5124.0 29 6069.5 30 7015.0 31 7620.5 32 8226.0 33 11435.5 34 14645.0 35 13362.5 36 12080.0 37 15295.5 38 18511.0 39 17742.5 40 16974.0 41 21339.5 42 25705.0 43 26619.5 44 27534.0 45 29555.0 46 31576.0 47 35347.0 48 39118.0 49 43109.0 50 47100.0 51 47696.5 52 48293.0 53 53597.0 54 58901.0 55 60702.0 56 62503.0 57 67286.0 58 72069.0 59 72869.5 60 73670.0 61 69396.0 62 65122.0 63 54821.5 64 44521.0 65 38205.0 66 31889.0 67 26230.0 68 20571.0 69 19511.0 70 18451.0 71 15130.0 72 11809.0 73 9919.0 74 8029.0 75 5776.0 76 3523.0 77 2565.0 78 1607.0 79 1392.5 80 1178.0 81 798.5 82 419.0 83 256.5 84 94.0 85 71.5 86 49.0 87 28.5 88 8.0 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 794328.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.524906587706841 #Duplication Level Percentage of deduplicated Percentage of total 1 69.4510897579931 6.615151423593277 2 9.343237420531596 1.7798692731466095 3 3.6902417425554135 1.054476236516905 4 1.6904796521233427 0.6440664309957599 5 0.9093432374205316 0.4330704696296744 6 0.6198865964392868 0.3542617155633441 7 0.3832987483313287 0.25556193411286016 8 0.3264647959925455 0.24876373488030135 9 0.26698740401009796 0.22887270749614771 >10 6.933742185331554 19.403319535506743 >50 4.294267701132714 28.49339315748658 >100 2.0103358490067276 32.628209001822924 >500 0.06344255144794407 4.145894391233848 >1k 0.015860637861986018 2.802998257646715 >5k 0.0013217198218321681 0.9120917303683113 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATTCCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7245 0.9120917303683113 No Hit ATTCCAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 4292 0.5403309464100473 No Hit ATTCCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 2988 0.37616702420158926 No Hit ATTCCAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 2538 0.3195153639302656 No Hit ATTCCAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTA 2013 0.25342176028038793 No Hit ATTCCAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 1802 0.2268584262420562 No Hit ATTCCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1511 0.19022368593326686 No Hit ATTCCAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 1426 0.17952281677090573 No Hit ATTCCAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1249 0.1572398303975184 No Hit ATTCCAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 1219 0.15346305304609684 No Hit ATTCCAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1120 0.14099968778640562 No Hit ATTCCAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 1100 0.13848183621879123 No Hit ATTCCAGGGGCTCTCGAACCAGGCTGCTTCAGCCGTGAACAACGCCGAAA 1007 0.12677382642938434 No Hit ATTCCAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 1000 0.1258925783807193 No Hit ATTCCAGGGTATGCCACAACTAGATACATCAACATGATTTATCACAATTA 941 0.11846491625625685 No Hit ATTCCAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 925 0.11645063500216535 No Hit ATTCCAGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 920 0.11582117211026176 No Hit ATTCCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG 910 0.11456224632645456 No Hit ATTCCAGGGGCTTTCGCCGCCGGACGCCGCCGAGGTCGCACGCGTGAGGT 905 0.11393278343455096 No Hit ATTCCAGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 877 0.11040779123989083 No Hit ATTCCAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 858 0.10801583225065717 No Hit ATTCCAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 798 0.10046227754781399 No Hit ATTCCAGGGGATGCCATCCCAGGCCGACTAAATCAAGCAACAGTAACATC 796 0.10021049239105255 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.03638295515202788 0.0 0.0 0.0 0.0 7 0.04192222860077953 0.0 0.0 0.0 0.0 8 0.04733560947115046 0.0 0.0 0.0 0.0 9 0.05577041222265865 0.0 0.0 0.0 0.0 10 0.06898913295263417 0.0 0.0 0.0 0.0 11 0.08170428336908682 0.0 0.0 0.0 0.0 12 0.0906426564341179 0.0 0.0 0.0 0.0 13 0.10033638496943328 0.0 0.0 0.0 0.0 14 0.11519170921835815 0.0 0.0 0.0 0.0 15 0.13092828151594807 0.0 0.0 0.0 0.0 16 0.14515414287296935 0.0 0.0 0.0 0.0 17 0.15824697102456417 0.0 0.0 0.0 0.0 18 0.17008087339235178 0.0 0.0 0.0 0.0 19 0.18770583436565247 0.0 0.0 0.0 0.0 20 0.20105044767400873 0.0 0.0 0.0 0.0 21 0.21162542425798914 0.0 0.0 0.0 0.0 22 0.2263548559285333 0.0 0.0 0.0 0.0 23 0.24158785791260035 0.0 0.0 0.0 0.0 24 0.2553101489560987 0.0 0.0 0.0 0.0 25 0.2681511919509321 0.0 0.0 0.0 0.0 26 0.2840136568269027 0.0 0.0 0.0 0.0 27 0.29458863341088315 0.0 0.0 0.0 0.0 28 0.31284305727608747 0.0 0.0 0.0 0.0 29 0.3265653483195859 0.0 0.0 0.0 0.0 30 0.33940639131441924 0.0 0.0 0.0 0.0 31 0.3521215417308719 0.0 0.0 0.0 0.0 32 0.36546615503922814 0.0 0.0 0.0 0.0 33 0.37843309061244224 0.0 0.0 0.0 0.0 34 0.39366609259650925 0.0 0.0 0.0 0.0 35 0.4101580203643835 0.0 0.0 0.0 0.0 36 0.4285383368079685 0.0 0.0 0.0 0.0 37 0.4415052723811826 0.0 0.0 0.0 0.0 38 0.45384274506249306 0.0 0.0 2.517851567614386E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTTA 30 2.5267254E-6 44.0 12 CTTAAGG 25 4.4415938E-5 44.0 20 AACCGTT 35 1.4453326E-7 44.0 26 CTATGCG 20 7.855011E-4 44.0 31 ACACGTT 25 4.4415938E-5 44.0 20 ACTGCGT 35 1.4453326E-7 44.0 33 ACGCCGT 20 7.855011E-4 44.0 18 GCGACGT 30 2.5267254E-6 44.0 43 CGACGTT 30 2.5267254E-6 44.0 44 CGAAAAT 20 7.855011E-4 44.0 27 TAGACGG 20 7.855011E-4 44.0 30 TAGCGTT 20 7.855011E-4 44.0 42 ACCGATA 20 7.855011E-4 44.0 10 ATAGCGT 45 4.802132E-10 44.0 25 ATTCGTT 35 1.4453326E-7 44.0 14 TAACGTC 20 7.855011E-4 44.0 22 TAACGGC 25 4.4415938E-5 44.0 13 ATCGTTT 25 4.4415938E-5 44.0 17 AACGGTA 25 4.4415938E-5 44.0 44 TACATAC 20 7.855011E-4 44.0 28 >>END_MODULE