##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527654_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 805830 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.520761202735066 33.0 31.0 34.0 31.0 34.0 2 32.907269523348596 34.0 31.0 34.0 31.0 34.0 3 33.20597892855813 34.0 34.0 34.0 31.0 34.0 4 36.22075747986548 37.0 35.0 37.0 35.0 37.0 5 36.47483091967288 37.0 37.0 37.0 35.0 37.0 6 36.56095206184927 37.0 37.0 37.0 35.0 37.0 7 36.5158271595746 37.0 37.0 37.0 35.0 37.0 8 36.667633371802985 37.0 37.0 37.0 35.0 37.0 9 38.78201109415137 39.0 39.0 39.0 39.0 39.0 10 38.34757579142003 39.0 39.0 39.0 37.0 39.0 11 38.12057009542956 39.0 39.0 39.0 37.0 39.0 12 37.55238077510145 39.0 37.0 39.0 35.0 39.0 13 37.427682017298935 39.0 37.0 39.0 35.0 39.0 14 38.156278619559956 40.0 38.0 40.0 35.0 40.0 15 38.20090962113597 40.0 38.0 40.0 35.0 40.0 16 38.29905190921162 40.0 38.0 40.0 35.0 40.0 17 38.1659096831838 40.0 38.0 40.0 34.0 40.0 18 38.09181216881973 40.0 38.0 40.0 34.0 40.0 19 38.08445950138367 40.0 38.0 40.0 34.0 40.0 20 37.984409863122494 40.0 38.0 40.0 34.0 40.0 21 37.94833649777248 40.0 37.0 40.0 34.0 40.0 22 38.037625801968154 40.0 38.0 40.0 34.0 40.0 23 37.975973840636364 40.0 37.0 40.0 34.0 40.0 24 37.92172294404527 40.0 37.0 40.0 34.0 40.0 25 37.93400841368527 40.0 37.0 40.0 34.0 40.0 26 37.82223049526575 40.0 37.0 40.0 34.0 40.0 27 37.71522901852748 40.0 37.0 40.0 34.0 40.0 28 37.60526537855379 40.0 36.0 40.0 34.0 40.0 29 37.66231587307497 40.0 37.0 40.0 34.0 40.0 30 37.72039884342851 40.0 37.0 40.0 34.0 40.0 31 37.77911842448159 40.0 37.0 40.0 34.0 40.0 32 37.7672908678009 40.0 36.0 40.0 34.0 40.0 33 37.691855602298254 40.0 36.0 40.0 34.0 40.0 34 37.293692217961606 40.0 35.0 40.0 33.0 40.0 35 37.32323070622836 40.0 35.0 40.0 33.0 40.0 36 37.333526922551904 40.0 35.0 40.0 33.0 40.0 37 37.28137944727796 40.0 35.0 40.0 33.0 40.0 38 37.17407021332043 40.0 35.0 40.0 33.0 40.0 39 37.067401312932006 40.0 35.0 40.0 33.0 40.0 40 36.919245994812805 39.0 35.0 40.0 33.0 40.0 41 36.771139073998235 39.0 35.0 40.0 33.0 40.0 42 36.72017919412283 39.0 35.0 40.0 33.0 40.0 43 36.64216025712619 39.0 35.0 40.0 32.0 40.0 44 36.31818373602373 39.0 35.0 40.0 31.0 40.0 45 36.2577801769604 38.0 35.0 40.0 31.0 40.0 46 36.13206135289081 38.0 35.0 40.0 31.0 40.0 47 36.04363947730911 38.0 35.0 40.0 31.0 40.0 48 35.94622563071616 37.0 35.0 40.0 31.0 40.0 49 35.83398979933733 37.0 35.0 40.0 31.0 40.0 50 35.345766476800314 36.0 34.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 10.0 15 7.0 16 34.0 17 55.0 18 107.0 19 182.0 20 297.0 21 537.0 22 760.0 23 1156.0 24 1588.0 25 2208.0 26 3050.0 27 4077.0 28 5420.0 29 7113.0 30 9430.0 31 12724.0 32 16366.0 33 23414.0 34 52640.0 35 64236.0 36 59939.0 37 110420.0 38 248329.0 39 181726.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.70576920690468 0.17758087934179664 0.06676346127595151 0.04988645247756971 8 99.73480758969013 0.18651576635270464 0.06155144385292183 0.01712520010424035 9 99.60413486715561 0.19706389685169326 0.12173783552362162 0.07706340046908157 10 68.51792561706563 22.550413859002518 2.520382710993634 6.411277812938213 11 39.407691448568556 30.265936984227444 14.876214586203046 15.450156981000957 12 33.01577255748731 16.67299554496606 24.004566720027796 26.306665177518834 13 25.35534790216299 18.06311504907983 26.892024372386235 29.68951267637095 14 22.86847101746026 20.091954878820594 29.596316841021057 27.44325726269809 15 23.565144013005224 21.25981906853803 28.042515170693573 27.132521747763178 16 29.63354553689984 20.88157551840959 24.101113138006774 25.383765806683794 17 30.323269175880768 20.307384932305823 23.73130809227753 25.638037799535883 18 28.2507476763089 21.284886390429744 23.837782162490846 26.626583770770512 19 29.179355447178683 22.45262648449425 21.18225928545723 27.185758782869833 20 29.894270503704256 22.44245064095405 22.46280232803445 25.20047652730725 21 29.017410620105977 23.03686881848529 23.666157874489656 24.279562686919075 22 29.2268840822506 20.373403819664198 24.71005050693074 25.68966159115446 23 28.168348162763856 23.2140774108683 23.21482198478587 25.40275244158197 24 28.636933348224815 21.35450405172307 23.135648958216994 26.872913641835126 25 28.317014754973137 23.47480237767271 21.335641512477817 26.87254135487634 26 26.080066515269966 23.06801682737054 23.113435836342653 27.738480821016843 27 24.851767742575976 21.201742302967126 23.15736569747962 30.789124256977278 28 25.82691138329424 22.588883511410597 21.402032686794982 30.18217241850018 29 29.071268133477286 22.588883511410597 21.153965476589356 27.185882878522765 30 26.229849968355605 21.79901468051574 23.547894717248056 28.423240633880596 31 29.51590285792289 21.67702865368626 22.013327873124606 26.79374061526625 32 32.872193887048134 21.692292418996562 20.759465395927183 24.67604829802812 33 32.36489085787325 21.531836739759004 20.64790340394376 25.45536899842398 34 29.016293759229615 22.60849062457342 24.694166263355793 23.681049352841168 35 27.453681297544147 25.64722087785265 24.28067954779544 22.618418276807763 36 27.92760259608106 26.05326185423725 21.193800181179654 24.825335368502042 37 28.68247645284986 25.830137870270402 20.648275690902548 24.839109985977192 38 28.70903292257672 26.50087487435315 21.682364766762223 23.107727436307908 39 30.082399513545038 23.584502934862194 21.387389399749328 24.94570815184344 40 28.374098755320603 24.224712408324336 20.860106970452826 26.54108186590224 41 25.511956616159736 25.42856433739126 22.13270789124257 26.92677115520643 42 24.987404291227676 22.798108782249358 21.544494496357792 30.669992430165173 43 25.80345730489061 21.126292145986124 24.477743444647135 28.592507104476127 44 25.75208170457789 21.47611779159376 23.41622922949009 29.35557127433826 45 27.66241018577119 21.983793107727436 22.56282342429545 27.790973282205922 46 26.89289304195674 24.035962920218903 21.360212451757814 27.71093158606654 47 25.185833240261594 23.545660995495325 23.770025935991463 27.498479828251615 48 26.907412233349465 22.143256021741557 25.56271173820781 25.386620006701165 49 27.754489160244717 22.551158432920097 23.074842088281645 26.61951031855354 50 25.320228832384 23.52282739535634 24.61226313242247 26.544680639837186 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 25.0 4 50.0 5 39.0 6 28.0 7 18.0 8 8.0 9 124.0 10 240.0 11 1092.5 12 1945.0 13 2313.5 14 2682.0 15 2312.0 16 1942.0 17 1822.5 18 1703.0 19 1743.5 20 1784.0 21 1831.0 22 1878.0 23 2104.0 24 2330.0 25 2475.5 26 2621.0 27 2963.0 28 3305.0 29 3958.5 30 4612.0 31 5392.5 32 6173.0 33 8601.5 34 11030.0 35 10713.5 36 10397.0 37 11305.5 38 12214.0 39 12766.5 40 13319.0 41 16516.0 42 19713.0 43 22734.5 44 25756.0 45 28475.0 46 31194.0 47 35431.5 48 39669.0 49 40349.0 50 41029.0 51 44660.0 52 48291.0 53 51955.5 54 55620.0 55 61966.0 56 68312.0 57 72765.0 58 77218.0 59 76327.0 60 75436.0 61 76756.0 62 78076.0 63 67639.5 64 57203.0 65 47135.0 66 37067.0 67 29360.5 68 21654.0 69 19694.0 70 17734.0 71 14987.0 72 12240.0 73 12036.0 74 11832.0 75 9025.0 76 6218.0 77 4035.0 78 1852.0 79 1435.5 80 1019.0 81 686.0 82 353.0 83 210.0 84 67.0 85 38.5 86 10.0 87 7.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 805830.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.79192881873348 #Duplication Level Percentage of deduplicated Percentage of total 1 67.6589317976513 5.948525123164935 2 9.249378952122854 1.6263976272911158 3 3.443992773261066 0.9083801794423141 4 1.6965898825654924 0.5966518992839681 5 0.9386291779584462 0.412618045989849 6 0.5349480578139115 0.2821935147611779 7 0.4149728997289973 0.2553888537284539 8 0.3571025293586269 0.2511696015288585 9 0.28935185185185186 0.2289564796545177 >10 8.856989611562781 22.92145986126106 >50 4.436257904245709 26.692850849434745 >100 2.022640018066847 29.359045952620278 >500 0.07339656729900633 4.437288261792189 >1k 0.023995031616982836 4.559646575580458 >5k 0.002822944896115628 1.5194271744660786 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 6401 0.7943362744003077 No Hit CTGAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 5843 0.7250909000657707 No Hit CTGAAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4102 0.5090403683158979 No Hit CTGAAAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 3769 0.4677165158904484 No Hit CTGAAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3605 0.4473648288100468 No Hit CTGAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 3569 0.4428973853045927 No Hit CTGAAAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2650 0.3288534802625864 No Hit CTGAAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2573 0.319298114987032 No Hit CTGAAAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 2393 0.296960897459762 No Hit CTGAAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2167 0.26891527989774516 No Hit CTGAAAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1913 0.2373949840537086 No Hit CTGAAAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 1536 0.19061092289937084 No Hit CTGAAAGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 1466 0.1819242271943214 No Hit CTGAAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1462 0.18142784458260428 No Hit CTGAAAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1257 0.1559882357321023 No Hit CTGAAAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1133 0.14060037476887186 No Hit CTGAAAGGGGACTTGCACTGCTCCATCCGTCCAACATGTTCAAGTTCTTC 1073 0.1331546355931152 No Hit CTGAAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1055 0.13092091384038818 No Hit CTGAAAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1020 0.12657756598786343 No Hit CTGAAAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 999 0.1239715572763486 No Hit CTGAAAGGGGATCACGCTCAAACATTCTCACAATCTAACCAACCAAACCA 983 0.12198602682948016 No Hit CTGAAAGGGGTGTTCTTTATTAATATCCTAACACTCCTCGTCCCCATTCT 948 0.11764267897695543 No Hit CTGAAAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 932 0.11565714853008699 No Hit CTGAAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 918 0.11391980938907709 No Hit CTGAAAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 883 0.10957646153655237 No Hit CTGAAAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 878 0.10895598327190599 No Hit CTGAAAGGGACTAATCCTAGCCCTAGCCCTACACAAATATAATTATACTA 876 0.10870779196604743 No Hit CTGAAAGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 817 0.10138614844322003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.02407455666827991 0.0 0.0 0.0 0.0 7 0.02419865232120919 0.0 0.0 0.0 0.0 8 0.03598773934949059 0.0 0.0 0.0 0.0 9 0.06887308737574922 0.0 0.0 0.0 0.0 10 0.1016343397490786 0.0 0.0 0.0 0.0 11 0.14568829653897225 0.0 0.0 0.0 0.0 12 0.16380626186664682 0.0 0.0 0.0 0.0 13 0.176836305424221 0.0 0.0 0.0 0.0 14 0.18564709678219973 0.0 0.0 0.0 0.0 15 0.19718799250462257 0.0 0.0 0.0 0.0 16 0.21021803606219674 0.0 0.0 0.0 0.0 17 0.22126254917290247 0.0 0.0 0.0 0.0 18 0.2340444014246181 0.0 0.0 0.0 0.0 19 0.2515418884876463 0.0 0.0 0.0 0.0 20 0.2659369842274425 0.0 0.0 0.0 0.0 21 0.2752441581971384 0.0 0.0 0.0 0.0 22 0.28591638434905625 0.0 0.0 0.0 0.0 23 0.2968368018068327 0.0 0.0 0.0 0.0 24 0.30837769752925553 0.0 0.0 0.0 0.0 25 0.3200426889046077 0.0 0.0 0.0 0.0 26 0.3302185324448085 0.0 0.0 0.0 0.0 27 0.34151123686137275 0.0 0.0 0.0 0.0 28 0.3564027152128861 0.0 0.0 0.0 0.0 29 0.36620627179429904 0.0 0.0 0.0 0.0 30 0.3758857327227827 0.0 0.0 0.0 0.0 31 0.3855651936512664 0.0 0.0 0.0 0.0 32 0.39871933286176986 0.0 0.0 0.0 0.0 33 0.4098879416254049 0.0 0.0 0.0 0.0 34 0.42217341126540336 0.0 0.0 0.0 0.0 35 0.43632031569934104 0.0 0.0 0.0 0.0 36 0.45034312448034947 0.0 0.0 0.0 0.0 37 0.4627526897732772 0.0 0.0 0.0 0.0 38 0.4745417768015586 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 25 4.441652E-5 44.0 40 TAATACC 20 7.85508E-4 44.0 26 CGTATCT 25 4.441652E-5 44.0 14 TTTACGC 30 2.526771E-6 44.0 44 CGCATTC 25 4.441652E-5 44.0 32 ATATGTC 25 4.441652E-5 44.0 41 CACGATA 20 7.85508E-4 44.0 21 TATGCGG 20 7.85508E-4 44.0 23 CCGCTAT 30 2.526771E-6 44.0 21 TTATACG 20 7.85508E-4 44.0 16 AATGCCG 40 8.307325E-9 44.0 19 ATATCGT 35 1.445369E-7 44.0 14 ACGATAC 45 4.802132E-10 44.0 43 CTAGTTT 20 7.85508E-4 44.0 38 TAACAGG 20 7.85508E-4 44.0 19 GTGTCGA 25 4.441652E-5 44.0 21 TGTTACG 30 2.526771E-6 44.0 29 GAACGTT 20 7.85508E-4 44.0 39 AGATTCG 25 4.441652E-5 44.0 44 TTAACTA 35 1.445369E-7 44.0 23 >>END_MODULE