##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527651_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 674169 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41491525122039 33.0 31.0 34.0 31.0 34.0 2 31.637079130010427 31.0 31.0 33.0 30.0 34.0 3 32.336660392275526 33.0 31.0 34.0 31.0 34.0 4 36.454469131627235 37.0 37.0 37.0 35.0 37.0 5 36.46083400453002 37.0 37.0 37.0 35.0 37.0 6 36.45519150242743 37.0 37.0 37.0 35.0 37.0 7 36.54291283046239 37.0 37.0 37.0 35.0 37.0 8 36.682041149919385 37.0 37.0 37.0 35.0 37.0 9 38.753495043527664 39.0 39.0 39.0 39.0 39.0 10 38.297306758394406 39.0 39.0 39.0 37.0 39.0 11 38.03484882870615 39.0 38.0 39.0 37.0 39.0 12 37.572359452896826 39.0 37.0 39.0 35.0 39.0 13 37.46559690522703 39.0 37.0 39.0 35.0 39.0 14 38.24207579998487 40.0 38.0 40.0 35.0 40.0 15 38.26594963577382 40.0 38.0 40.0 35.0 40.0 16 38.32595387803355 40.0 38.0 40.0 35.0 40.0 17 38.28165193000568 40.0 38.0 40.0 35.0 40.0 18 38.195596356403215 40.0 38.0 40.0 34.0 40.0 19 38.17875488193613 40.0 38.0 40.0 34.0 40.0 20 38.053689801815274 40.0 38.0 40.0 34.0 40.0 21 37.99580372280541 40.0 38.0 40.0 34.0 40.0 22 38.02913957776166 40.0 38.0 40.0 34.0 40.0 23 37.93200517971013 40.0 38.0 40.0 34.0 40.0 24 37.83007524819445 40.0 37.0 40.0 34.0 40.0 25 37.80458164050854 40.0 37.0 40.0 34.0 40.0 26 37.694538016432084 40.0 37.0 40.0 34.0 40.0 27 37.556151350774066 40.0 36.0 40.0 33.0 40.0 28 37.366645455368015 39.0 36.0 40.0 33.0 40.0 29 37.45597172222395 40.0 37.0 40.0 33.0 40.0 30 37.64089716376754 40.0 37.0 40.0 34.0 40.0 31 37.65697473482168 40.0 37.0 40.0 34.0 40.0 32 37.63607493076662 40.0 36.0 40.0 34.0 40.0 33 37.5171952433292 40.0 36.0 40.0 33.0 40.0 34 37.14657897352148 40.0 35.0 40.0 33.0 40.0 35 37.13725193534559 40.0 35.0 40.0 33.0 40.0 36 37.0420384206334 40.0 35.0 40.0 33.0 40.0 37 36.90791033108909 39.0 35.0 40.0 32.0 40.0 38 36.75301148525073 39.0 35.0 40.0 32.0 40.0 39 36.609164764324674 39.0 35.0 40.0 32.0 40.0 40 36.38582313930187 39.0 35.0 40.0 31.0 40.0 41 36.22792504550046 39.0 35.0 40.0 31.0 40.0 42 36.13143588625404 39.0 35.0 40.0 31.0 40.0 43 36.03725772024522 38.0 35.0 40.0 31.0 40.0 44 35.74201869264235 38.0 35.0 40.0 30.0 40.0 45 35.66997444261009 37.0 35.0 40.0 30.0 40.0 46 35.527338100683956 37.0 35.0 40.0 30.0 40.0 47 35.421023511908736 37.0 35.0 40.0 30.0 40.0 48 35.28503980455939 37.0 35.0 40.0 29.0 40.0 49 35.18256253254006 36.0 34.0 40.0 29.0 40.0 50 34.65273544170675 35.0 34.0 40.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 6.0 16 21.0 17 53.0 18 99.0 19 169.0 20 266.0 21 418.0 22 669.0 23 986.0 24 1537.0 25 2336.0 26 3157.0 27 4266.0 28 5887.0 29 7836.0 30 9952.0 31 12280.0 32 14902.0 33 20270.0 34 40842.0 35 48141.0 36 67541.0 37 110929.0 38 226550.0 39 95052.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.47401912576817 0.447810563820051 0.05384406580545828 0.02432624460632275 8 99.39199221560172 0.5055112293801702 0.03990097438476109 0.06259558063334268 9 97.20070190115536 1.6521080025928219 0.5443738884463688 0.6028162078054612 10 55.36267612423591 33.226831847800774 5.02247952664688 6.388012501316435 11 36.154287723108006 23.812426854394076 22.0647938424935 17.968491580004418 12 29.354064040322235 17.752077001464027 26.81968467847083 26.074174279742913 13 25.37939300086477 17.67094007585635 29.36949043934088 27.580176483938 14 25.703940703295462 18.856547838894997 29.4742119557559 25.96529950205364 15 26.528659727753723 19.834640868980923 27.54220380943057 26.094495593834782 16 29.889538083180923 20.095258013940125 24.94819548214172 25.067008420737235 17 31.233859759199845 20.530757124697217 22.93490207944892 25.300481036654016 18 29.19475680430278 21.276712515704517 23.51279871960888 26.01573196038382 19 29.221456341065817 21.688033712615088 21.909046544709117 27.181463401609985 20 28.20094071367862 22.58780810152944 23.64199481139002 25.56925637340192 21 30.3339370395257 20.984204257389468 24.94211392099014 23.739744782094697 22 30.433911971627293 19.990684828284895 24.46256057457403 25.11284262551378 23 28.02591041712093 22.32659763353106 23.996208665779648 25.651283283568365 24 27.705960968243872 22.764766697964454 22.861775014870158 26.66749731892152 25 29.05473256705663 23.041848557260867 22.795026172962565 25.10839270271994 26 27.12109278237356 22.35433548561266 23.084271154562135 27.440300577451648 27 26.794468449305736 21.257429516931214 23.612476990190885 28.33562504357216 28 28.58823232750245 22.55146706537975 23.147460058234657 25.712840548883143 29 29.169837236657276 22.930897148934466 21.596365303061994 26.302900311346267 30 28.602620411202533 20.932140160701547 22.618957561086315 27.84628186700961 31 29.38165356164404 22.098761586486475 22.313247865149542 26.206336986719947 32 32.53397886879996 21.9261045820855 21.711914964942025 23.828001584172515 33 31.622634680621626 21.92699456664427 22.358637077646705 24.091733675087404 34 29.27900867586614 23.642143142149816 24.543994161701292 22.53485402028275 35 28.868132471234958 24.7212494196559 24.864240272097945 21.546377837011192 36 29.625805992266034 24.04916274702634 21.611346709801253 24.713684550906375 37 29.43698093504744 24.970148434591326 21.61194003284043 23.9809305975208 38 30.321180594183357 23.896382064437848 22.288328297504037 23.494109043874754 39 29.1081316405827 23.351859845231683 21.86543730132949 25.674571212856122 40 28.65201455421415 23.909286840539984 22.123236161852592 25.315462443393272 41 27.384676542528652 23.43299677083936 23.44441823934355 25.737908447288437 42 25.445400188973387 22.974803053833686 24.15729587091664 27.42250088627629 43 27.298644701847756 21.149593054560505 24.86527858741651 26.68648365617523 44 26.77770707344894 21.604820156370288 24.9875031334873 26.629969636693467 45 28.156886478019604 21.377132440085497 23.92322993196068 26.54275114993421 46 27.73889039691828 22.94854850935003 23.062021540592937 26.25053955313875 47 26.852762437905035 23.64955968013955 23.367137913490534 26.130539968464884 48 28.285934239040955 22.7690682899985 24.627504379465684 24.317493091494864 49 27.84806183612714 23.02953710419791 24.244514357675897 24.877886701999053 50 25.92584351994826 22.89500110506416 23.410895487629958 27.768259887357623 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 2.0 4 4.0 5 5.0 6 6.0 7 20.5 8 35.0 9 306.0 10 577.0 11 1154.5 12 1732.0 13 1676.5 14 1621.0 15 1645.0 16 1669.0 17 1705.0 18 1741.0 19 1724.5 20 1708.0 21 1939.0 22 2170.0 23 2414.0 24 2658.0 25 3259.0 26 3860.0 27 4686.5 28 5513.0 29 5187.0 30 4861.0 31 5522.5 32 6184.0 33 8200.5 34 10217.0 35 9808.0 36 9399.0 37 10503.5 38 11608.0 39 13060.0 40 14512.0 41 15454.5 42 16397.0 43 18893.5 44 21390.0 45 22749.5 46 24109.0 47 26495.5 48 28882.0 49 31461.5 50 34041.0 51 37826.0 52 41611.0 53 43836.5 54 46062.0 55 53550.0 56 61038.0 57 63655.0 58 66272.0 59 63228.0 60 60184.0 61 59116.0 62 58048.0 63 49905.5 64 41763.0 65 36908.5 66 32054.0 67 25800.0 68 19546.0 69 16706.5 70 13867.0 71 12238.5 72 10610.0 73 10954.0 74 11298.0 75 7781.5 76 4265.0 77 2953.5 78 1642.0 79 1166.0 80 690.0 81 479.5 82 269.0 83 150.5 84 32.0 85 23.0 86 14.0 87 10.0 88 6.0 89 4.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 674169.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.416972598858742 #Duplication Level Percentage of deduplicated Percentage of total 1 68.84718345958876 7.171792236071371 2 8.527937574756507 1.7767058408203287 3 3.280742723699949 1.0252622117006271 4 1.610468758899584 0.6710483573110007 5 0.8985020219855329 0.46798354715212354 6 0.568149456057413 0.35510383894839426 7 0.42433217520077465 0.30941796493164175 8 0.3645269692999943 0.30378139605944504 9 0.32608076550663556 0.3057096959367755 >10 9.71122629150766 29.586943333199834 >50 3.994133394087828 28.37226274124144 >100 1.3840633365609158 23.341476692046058 >500 0.04414193768867119 2.941992289767106 >1k 0.018511135159765334 3.3705198548138524 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3125 0.4635336243582841 No Hit GTATACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2684 0.39811975928884297 No Hit GTATACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2505 0.37156855328560046 No Hit GTATACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2401 0.35614215426695683 No Hit GTATACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1932 0.28657502792326556 No Hit GTATACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1583 0.23480759275493235 No Hit GTATACGGGGGGGCTGGAGAGATGGCTTAGAGGTTAAGAGCACTGACTGC 1444 0.2141896171434759 No Hit GTATACGGGATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGTGGTG 1425 0.21137133270737754 No Hit GTATACGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 1409 0.20899804055066312 No Hit GTATACGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1107 0.16420215109267855 No Hit GTATACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1092 0.16197718969575878 No Hit GTATACGGGAGCTTTTTGATAACCACTGGAAAGAATTTTATTGAAAGTTC 1008 0.1495174058730081 No Hit GTATACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1008 0.1495174058730081 No Hit GTATACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 978 0.14506748307916859 No Hit GTATACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 972 0.14417749852040068 No Hit GTATACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 913 0.13542598369251627 No Hit GTATACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 804 0.11925793087489932 No Hit GTATACGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 794 0.11777462327695282 No Hit GTATACGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 725 0.1075398008511219 No Hit GTATACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 715 0.10605649325317539 No Hit GTATACGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 679 0.10071658590056795 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.030704467277492736 0.0 0.0 0.0 0.0 8 0.03485772855174296 0.0 0.0 0.0 0.0 9 0.03826933602701993 0.0 0.0 0.0 0.0 10 0.054289058084842225 0.0 0.0 0.0 0.0 11 0.0667488419075929 0.0 0.0 0.0 0.0 12 0.07475870293650405 0.0 0.0 0.0 0.0 13 0.08425187156336171 0.0 0.0 0.0 0.0 14 0.09285505563145147 0.0 0.0 0.0 0.0 15 0.10709480857173795 0.0 0.0 0.0 0.0 16 0.11999958467387258 0.0 0.0 0.0 0.0 17 0.134684329893543 0.0 0.0 0.0 0.0 18 0.14669912143690975 0.0 0.0 0.0 0.0 19 0.15915890525966042 0.0 0.0 0.0 0.0 20 0.17473363503809874 0.0 0.0 0.0 0.0 21 0.18615510354228687 0.0 0.0 0.0 0.0 22 0.20158150256093058 0.0 0.0 0.0 0.0 23 0.21789788613834216 0.0 0.0 0.0 0.0 24 0.2343626004755484 0.0 0.0 0.0 0.0 25 0.24845402265604025 0.0 0.0 0.0 0.0 26 0.2681820137087288 0.0 0.0 0.0 0.0 27 0.28331175120778324 0.0 0.0 0.0 0.0 28 0.304226388338829 0.0 0.0 0.0 0.0 29 0.3208394334358299 0.0 0.0 0.0 0.0 30 0.3378974708122147 0.0 0.0 0.0 0.0 31 0.3491706085566082 0.0 0.0 0.0 0.0 32 0.3654869921340198 0.0 0.0 0.0 0.0 33 0.37735345291759187 0.0 0.0 0.0 0.0 34 0.3890715829413693 0.0 0.0 0.0 0.0 35 0.407464597155906 0.0 0.0 0.0 0.0 36 0.423187657694139 0.0 0.0 0.0 0.0 37 0.43787240291380947 0.0 0.0 0.0 0.0 38 0.4488488791386136 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAT 20 7.8541617E-4 44.000004 8 ACACCGA 20 7.8541617E-4 44.000004 41 ATAATCG 20 7.8541617E-4 44.000004 12 ACGATTC 20 7.8541617E-4 44.000004 31 GCCGATA 20 7.8541617E-4 44.000004 36 TTGACCG 20 7.8541617E-4 44.000004 29 GCGATAA 20 7.8541617E-4 44.000004 9 CATAAGG 20 7.8541617E-4 44.000004 31 TATAGCG 20 7.8541617E-4 44.000004 42 TTACGCG 20 7.8541617E-4 44.000004 17 CGATCGT 20 7.8541617E-4 44.000004 37 AGTACGT 20 7.8541617E-4 44.000004 32 GCGTAAG 20 7.8541617E-4 44.000004 19 GTACGTC 20 7.8541617E-4 44.000004 33 GTACGTA 20 7.8541617E-4 44.000004 9 TACCGTA 20 7.8541617E-4 44.000004 42 TACGTAG 20 7.8541617E-4 44.000004 10 TACGTAC 40 8.303687E-9 44.000004 25 TAATCGA 20 7.8541617E-4 44.000004 13 AACCGTT 25 4.4408764E-5 44.0 24 >>END_MODULE