##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527648_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1038428 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28769255066312 33.0 31.0 34.0 31.0 34.0 2 31.527715932158994 31.0 31.0 33.0 30.0 34.0 3 32.51932536487845 33.0 31.0 34.0 31.0 34.0 4 36.37116295015158 37.0 37.0 37.0 35.0 37.0 5 36.538841402581596 37.0 37.0 37.0 35.0 37.0 6 36.34906127338631 37.0 37.0 37.0 35.0 37.0 7 36.45344790394712 37.0 37.0 37.0 35.0 37.0 8 36.660206581486634 37.0 37.0 37.0 35.0 37.0 9 38.7647338091808 39.0 39.0 39.0 39.0 39.0 10 38.29673313893693 39.0 39.0 39.0 37.0 39.0 11 38.02955139884518 39.0 38.0 39.0 37.0 39.0 12 37.71820578797952 39.0 37.0 39.0 35.0 39.0 13 37.63509265928885 39.0 37.0 39.0 35.0 39.0 14 38.431150739386844 40.0 38.0 40.0 35.0 40.0 15 38.46294495140732 40.0 38.0 40.0 35.0 40.0 16 38.49220937802139 40.0 38.0 40.0 35.0 40.0 17 38.45623095679238 40.0 38.0 40.0 35.0 40.0 18 38.37835266383418 40.0 38.0 40.0 35.0 40.0 19 38.37660868158409 40.0 38.0 40.0 35.0 40.0 20 38.31804130859337 40.0 38.0 40.0 35.0 40.0 21 38.275658013844 40.0 38.0 40.0 35.0 40.0 22 38.292873458728 40.0 38.0 40.0 35.0 40.0 23 38.209283647975596 40.0 38.0 40.0 35.0 40.0 24 38.17197436894999 40.0 38.0 40.0 35.0 40.0 25 38.08482148016039 40.0 38.0 40.0 34.0 40.0 26 37.953683837492825 40.0 38.0 40.0 34.0 40.0 27 37.86954704611201 40.0 37.0 40.0 34.0 40.0 28 37.69356084389096 40.0 37.0 40.0 34.0 40.0 29 37.76005173204113 40.0 37.0 40.0 34.0 40.0 30 37.876631793441625 40.0 38.0 40.0 34.0 40.0 31 37.88775726386422 40.0 38.0 40.0 34.0 40.0 32 37.87135651195846 40.0 37.0 40.0 34.0 40.0 33 37.773204304968665 40.0 37.0 40.0 34.0 40.0 34 37.49432892795649 40.0 37.0 40.0 33.0 40.0 35 37.46002226442276 40.0 37.0 40.0 33.0 40.0 36 37.38583127573602 40.0 36.0 40.0 33.0 40.0 37 37.24749043746894 40.0 36.0 40.0 33.0 40.0 38 37.1558076246018 40.0 35.0 40.0 33.0 40.0 39 37.02712080182738 40.0 35.0 40.0 33.0 40.0 40 36.80650078772914 40.0 35.0 40.0 32.0 40.0 41 36.67755588254554 40.0 35.0 40.0 32.0 40.0 42 36.57309413844773 39.0 35.0 40.0 32.0 40.0 43 36.43256152569076 39.0 35.0 40.0 31.0 40.0 44 36.14716956784678 39.0 35.0 40.0 31.0 40.0 45 36.10707049501747 39.0 35.0 40.0 30.0 40.0 46 35.923286929859366 39.0 35.0 40.0 30.0 40.0 47 35.85477953213896 38.0 35.0 40.0 30.0 40.0 48 35.75387412511989 38.0 35.0 40.0 30.0 40.0 49 35.577079007885 37.0 35.0 40.0 30.0 40.0 50 35.09273440238514 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 0.0 14 6.0 15 7.0 16 32.0 17 54.0 18 115.0 19 237.0 20 417.0 21 679.0 22 1144.0 23 1743.0 24 2400.0 25 3503.0 26 4630.0 27 6090.0 28 8453.0 29 10961.0 30 13363.0 31 16487.0 32 20831.0 33 27991.0 34 52140.0 35 64864.0 36 85685.0 37 154635.0 38 366954.0 39 195005.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.66988563482495 0.23131117419792224 0.0660613927975748 0.03274179817955602 8 99.37848363102691 0.5253132619690533 0.07135786015015004 0.024845246853898394 9 98.93232848112724 0.6021601882845994 0.2042510409965833 0.26126028959157493 10 60.038057525413414 29.26587110517051 3.461578462830355 7.234492906585724 11 32.6725589063469 26.802724888003794 21.422573351257864 19.102142854391445 12 29.965967789774545 17.94915006143902 26.893246330029623 25.191635818756815 13 23.641119076142015 18.54880646515695 30.76708255170315 27.042991906997887 14 25.879598778153127 19.022695844102817 30.5677427804335 24.52996259731055 15 26.03011475037268 18.974353542084764 28.71157172187191 26.283959985670645 16 28.61421302199093 19.99291236368819 26.415890172452976 24.9769844418679 17 30.31784582079836 20.239342544692555 22.832300361700568 26.610511272808512 18 27.258991475576543 21.332918603889723 25.03023801361288 26.377851906920846 19 28.463697049771387 21.013493472826234 24.533718274160556 25.98909120324182 20 27.818491026821313 22.010384927987303 23.726632949034503 26.444491096156884 21 28.468126822466267 21.630580069104454 25.744394411552847 24.156898696876432 22 29.433817269950346 21.71455315149437 23.494647678991708 25.356981899563568 23 28.03853517046921 23.096642232297278 24.38734317641666 24.47747942081685 24 29.383452680397674 21.69895264765588 23.750322603011476 25.167272068934963 25 29.176890453647243 22.69777009094516 23.21412750811804 24.91121194728956 26 27.48895445808472 22.298127554341754 23.11734660467553 27.095571382897997 27 27.158165997064792 20.797012407215522 23.3380648441683 28.70675675155138 28 29.794458546957514 21.888951376503716 22.322683902976422 25.993906173562348 29 30.26035507517132 22.247762964789086 22.240733108121123 25.251148851918476 30 28.434999826661066 21.581948868867173 23.13227301266915 26.85077829180261 31 30.23512463069178 22.961630464509817 21.59851236676977 25.204732538028633 32 31.117901289256455 22.778083795891483 22.8574345067737 23.246580408078366 33 31.556448786049685 22.110825208873415 22.8215148281826 23.511211176894307 34 28.992380790964805 23.981152280177344 23.88321578385791 23.143251144999944 35 28.777922012888713 24.110963880018645 25.288320422792914 21.82279368429973 36 29.76807250960105 23.347405886590114 22.771920633881212 24.112600969927623 37 29.156282380675407 25.005200167946164 21.500479571043922 24.338037880334507 38 29.868994287519214 24.74018420150458 22.067297877175886 23.32352363380032 39 29.390193638846412 23.926357917929796 21.6218168231211 25.06163162010269 40 29.040819392389267 24.14332048057256 22.34955143736494 24.466308689673237 41 27.49348053018601 24.177314171035448 23.05234450534847 25.276860793430068 42 25.95191963236739 23.869541268147625 22.830952170010825 27.347586929474165 43 26.342702623581026 22.614856302025753 25.646265316420592 25.396175757972628 44 26.895557515783473 22.196916878204362 24.046443277723636 26.86108232828853 45 27.14824715820452 22.247474066569854 24.419892375783395 26.184386399442232 46 28.023030966037126 23.069100602063887 23.320442052795187 25.5874263791038 47 27.10635691641597 23.33825744298112 23.517566937717397 26.037818702885517 48 27.6526634489825 23.76823429260382 23.53528602849692 25.04381622991676 49 27.232027641781613 23.31071581274773 24.640803214088987 24.816453331381666 50 26.625533980208544 23.31447148959774 24.490479840682262 25.56951468951145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 6.0 2 12.0 3 14.0 4 16.0 5 31.5 6 47.0 7 631.0 8 1215.0 9 1918.0 10 2621.0 11 2999.5 12 3378.0 13 3004.0 14 2630.0 15 2473.0 16 2316.0 17 2775.5 18 3235.0 19 2999.0 20 2763.0 21 3916.0 22 5069.0 23 5579.0 24 6089.0 25 6844.0 26 7599.0 27 9747.5 28 11896.0 29 13330.5 30 14765.0 31 14697.5 32 14630.0 33 16228.5 34 17827.0 35 19597.5 36 21368.0 37 23730.5 38 26093.0 39 26696.5 40 27300.0 41 28747.5 42 30195.0 43 34597.5 44 39000.0 45 41615.5 46 44231.0 47 47909.5 48 51588.0 49 54790.5 50 57993.0 51 62464.0 52 66935.0 53 77298.5 54 87662.0 55 90495.0 56 93328.0 57 91501.5 58 89675.0 59 86731.5 60 83788.0 61 76912.5 62 70037.0 63 59142.5 64 48248.0 65 39826.0 66 31404.0 67 27343.0 68 23282.0 69 20557.0 70 17832.0 71 19063.5 72 20295.0 73 14203.0 74 8111.0 75 5193.0 76 2275.0 77 1689.5 78 1104.0 79 757.0 80 410.0 81 268.5 82 127.0 83 78.0 84 29.0 85 18.0 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1038428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.75209653473927 #Duplication Level Percentage of deduplicated Percentage of total 1 69.69108070839768 7.493252273869976 2 9.187518700518554 1.9757017596539557 3 3.5361940233998808 1.1406449851549072 4 1.7088837623409938 0.7349633271735522 5 0.9773199343343869 0.5254119139644186 6 0.6572083091495926 0.4239820310045513 7 0.5187503727406242 0.39043578595974193 8 0.4054699895377759 0.3487721975559911 9 0.34073859022212366 0.32972887936613154 >10 7.87205020104254 23.986784580653737 >50 3.532353270389754 26.263180122526137 >100 1.4879217771685016 26.748251795854227 >500 0.05753896902645565 4.3495017818647925 >1k 0.025173298949074347 4.094109322531827 >5k 0.0017980927820767391 1.1952792428660552 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 6449 0.6210348719410494 No Hit GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5916 0.5697072883242749 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3722 0.358426390659728 No Hit GAATTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 2319 0.22331832346585415 No Hit GAATTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2017 0.19423590272989558 No Hit GAATTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1968 0.1895172318157831 No Hit GAATTAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCT 1868 0.1798872911747372 No Hit GAATTAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 1834 0.1766131113567816 No Hit GAATTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1749 0.16842766181189261 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 1670 0.16082000870546634 No Hit GAATTAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCG 1516 0.14598990011825566 No Hit GAATTAGGGGTGCAGTGCTGAATTGGGGGCCAACCAGTAGAACACCCATT 1467 0.14127122920414317 No Hit GAATTAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAG 1423 0.137034055322083 No Hit GAATTAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGA 1414 0.13616736066438886 No Hit GAATTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1406 0.1353969654131052 No Hit GAATTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 1384 0.1332783784720751 No Hit GAATTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1349 0.129907899247709 No Hit GAATTAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1327 0.12778931230667895 No Hit GAATTAGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1235 0.11892976691691673 No Hit GAATTAGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAA 1230 0.11844826988486443 No Hit GAATTAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 1220 0.11748527582075984 No Hit GAATTAGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGA 1187 0.1143073954092147 No Hit GAATTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1186 0.11421109600280423 No Hit GAATTAGGGACTTGGGTGTATATTGTTAATTATTCTTTTGGATTCTTTTG 1180 0.11363329956434148 No Hit GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1173 0.11295920371946827 No Hit GAATTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1141 0.10987762271433359 No Hit GAATTAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 1137 0.10949242508869175 No Hit GAATTAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 1134 0.10920352686946037 No Hit GAATTAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 1065 0.10255886782713872 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.03909755900264631 0.0 0.0 0.0 0.0 7 0.045453319825736596 0.0 0.0 0.0 0.0 8 0.05383136818344652 0.0 0.0 0.0 0.0 9 0.0936993224373765 0.0 0.0 0.0 0.0 10 0.16919805706317625 0.0 0.0 0.0 0.0 11 0.22967408428894445 0.0 0.0 0.0 0.0 12 0.2544230317364324 0.0 0.0 0.0 0.0 13 0.2713717272646731 0.0 0.0 0.0 0.0 14 0.2932316925198473 0.0 0.0 0.0 0.0 15 0.32481789782247783 0.0 0.0 0.0 0.0 16 0.35264842627510046 0.0 0.0 0.0 0.0 17 0.3792270624443871 0.0 0.0 0.0 0.0 18 0.4023389199828972 0.0 0.0 0.0 0.0 19 0.42265809473550403 0.0 0.0 0.0 0.0 20 0.44114758076631216 0.0 0.0 0.0 0.0 21 0.4619482525509713 0.0 0.0 0.0 0.0 22 0.4839045172125559 0.0 0.0 0.0 0.0 23 0.5092312610985066 0.0 0.0 0.0 0.0 24 0.5359061966742037 0.0 0.0 0.0 0.0 25 0.5580550601486093 0.0 0.0 0.0 0.0 26 0.5832855046281494 0.0 0.0 0.0 0.0 27 0.6083233502948688 0.0 0.0 0.0 0.0 28 0.6370205734051855 0.0 0.0 0.0 0.0 29 0.6607102273821585 0.0 0.0 0.0 0.0 30 0.6859406718616986 0.0 0.0 0.0 0.0 31 0.7073191400848206 0.0 0.0 0.0 0.0 32 0.7326458839707712 0.0 0.0 0.0 0.0 33 0.7521946634720944 0.0 0.0 0.0 0.0 34 0.7734768322888058 0.0 0.0 0.0 0.0 35 0.7959145939824427 0.0 0.0 0.0 0.0 36 0.8151744752645345 0.0 0.0 0.0 0.0 37 0.8351084523914994 0.0 0.0 0.0 0.0 38 0.8567758188338527 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTA 25 4.4425426E-5 44.0 43 TAATACA 25 4.4425426E-5 44.0 36 TCCGATT 20 7.8561314E-4 44.0 38 ACGTTAC 25 4.4425426E-5 44.0 18 ATAGCGA 25 4.4425426E-5 44.0 21 ATTCGTA 20 7.8561314E-4 44.0 33 TACGGTT 20 7.8561314E-4 44.0 40 TAAGTCG 20 7.8561314E-4 44.0 35 CGATTAT 20 7.8561314E-4 44.0 24 CGTTCGA 20 7.8561314E-4 44.0 14 TTATCGC 20 7.8561314E-4 44.0 40 AAAACGT 35 1.4458965E-7 44.0 28 ATCGTTT 20 7.8561314E-4 44.0 35 TTGCGAA 20 7.8561314E-4 44.0 44 CGTACTT 20 7.8561314E-4 44.0 40 TCGTAGT 30 2.5274803E-6 44.0 43 ACGTAAC 50 2.7284841E-11 44.0 11 GATCTAT 50 2.7284841E-11 44.0 9 ATACGGT 25 4.4425426E-5 44.0 10 TAGTGCC 20 7.8561314E-4 44.0 30 >>END_MODULE