##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527647_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1565752 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.937919287345633 33.0 31.0 33.0 31.0 34.0 2 31.168402786648205 31.0 31.0 33.0 30.0 34.0 3 32.2132285317215 33.0 31.0 34.0 31.0 34.0 4 36.17358751577517 37.0 35.0 37.0 35.0 37.0 5 36.35529253674911 37.0 37.0 37.0 35.0 37.0 6 36.13087385486335 37.0 36.0 37.0 35.0 37.0 7 36.31551612260434 37.0 35.0 37.0 35.0 37.0 8 36.55929930154967 37.0 37.0 37.0 35.0 37.0 9 38.685758664207356 39.0 39.0 39.0 38.0 39.0 10 38.071385506772465 39.0 38.0 39.0 37.0 39.0 11 37.683601234422824 39.0 38.0 39.0 35.0 39.0 12 37.36553937021955 39.0 37.0 39.0 35.0 39.0 13 37.281524149418296 39.0 37.0 39.0 34.0 39.0 14 38.113775361615374 40.0 38.0 40.0 34.0 40.0 15 38.16745691527139 40.0 38.0 40.0 34.0 40.0 16 38.19272783940241 40.0 38.0 40.0 34.0 40.0 17 38.14831212094891 40.0 38.0 40.0 34.0 40.0 18 38.12421124162702 40.0 38.0 40.0 34.0 40.0 19 38.127347753667244 40.0 38.0 40.0 34.0 40.0 20 38.12977214782418 40.0 38.0 40.0 34.0 40.0 21 38.077442660140306 40.0 38.0 40.0 34.0 40.0 22 38.07826910008737 40.0 38.0 40.0 34.0 40.0 23 38.03090974815935 40.0 38.0 40.0 34.0 40.0 24 37.97033246644424 40.0 38.0 40.0 34.0 40.0 25 37.89407198585727 40.0 37.0 40.0 34.0 40.0 26 37.750184575845985 40.0 37.0 40.0 34.0 40.0 27 37.67716598797255 40.0 37.0 40.0 33.0 40.0 28 37.543919471282805 40.0 37.0 40.0 33.0 40.0 29 37.47332591623705 40.0 36.0 40.0 33.0 40.0 30 37.35363071546452 40.0 36.0 40.0 33.0 40.0 31 37.24440268957025 40.0 36.0 40.0 33.0 40.0 32 37.11863947802717 39.0 36.0 40.0 32.0 40.0 33 36.987384975398406 39.0 35.0 40.0 32.0 40.0 34 36.877288995958494 39.0 35.0 40.0 31.0 40.0 35 36.72659654913422 39.0 35.0 40.0 31.0 40.0 36 36.67811505270311 39.0 35.0 40.0 31.0 40.0 37 36.500238862859504 39.0 35.0 40.0 31.0 40.0 38 36.41332216085306 39.0 35.0 40.0 31.0 40.0 39 36.287139981299724 39.0 35.0 40.0 31.0 40.0 40 36.05266478982623 38.0 35.0 40.0 30.0 40.0 41 35.908853381633875 38.0 35.0 40.0 30.0 40.0 42 35.787880200695895 38.0 35.0 40.0 30.0 40.0 43 35.65829518340069 38.0 35.0 40.0 29.0 40.0 44 35.49851061981719 38.0 34.0 40.0 29.0 40.0 45 35.406557360297164 38.0 34.0 40.0 29.0 40.0 46 35.21192053403093 37.0 34.0 40.0 28.0 40.0 47 35.069579984569714 37.0 34.0 40.0 28.0 40.0 48 34.85273657641823 37.0 34.0 40.0 27.0 40.0 49 35.092312831150785 37.0 34.0 40.0 28.0 40.0 50 35.16334387565847 37.0 34.0 40.0 29.0 40.0 51 35.103828703396196 36.0 34.0 40.0 29.0 40.0 52 34.6400215359776 36.0 34.0 40.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 3.0 15 8.0 16 33.0 17 84.0 18 211.0 19 410.0 20 749.0 21 1363.0 22 2183.0 23 3565.0 24 5093.0 25 7116.0 26 9599.0 27 12951.0 28 16821.0 29 20743.0 30 25763.0 31 32103.0 32 41570.0 33 57971.0 34 97001.0 35 112454.0 36 165258.0 37 259529.0 38 514756.0 39 178414.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.73188602026374 0.20348050010474203 0.04764483775208334 0.01698864187942918 8 99.40820768550832 0.5056994977493243 0.06169559419371651 0.024397222548653938 9 98.94842861449322 0.5947301999294907 0.18968521196204763 0.2671559736152341 10 59.912361600049046 29.425860544964976 3.46727962027192 7.194498234714055 11 32.52967264292174 26.87909707284423 21.34750586299746 19.243724421236568 12 29.875484751097236 17.891275246654644 27.119875944594035 25.113364057654085 13 23.689447626444036 18.402658914055355 30.784760294095104 27.123133165405505 14 25.852497713558726 19.032963074612073 30.546663839484157 24.567875372345046 15 26.04243839381971 18.940739018695172 28.70007510767989 26.31674747980523 16 28.607787184688256 19.925058374506307 26.414336369999848 25.052818070805593 17 30.428445884150236 20.114360384019946 22.83624737506323 26.620946356766588 18 27.491071382952086 21.1463884446579 24.94628779014812 26.41625238224189 19 28.457380223688045 20.913337488950994 24.613987400303497 26.015294887057465 20 27.85734905655557 21.881179139480583 23.70228490846571 26.559186895498136 21 28.490144033026944 21.512091314588773 25.812900127223216 24.184864525161075 22 29.541459950234778 21.66288147803739 23.368962645425327 25.426695926302507 23 28.296115859982933 22.95618974141499 24.184161987338992 24.563532411263086 24 29.378535042586567 21.59435210684706 23.701710104793097 25.325402745773278 25 29.21024530066064 22.528408074841995 23.203802390161403 25.05754423433596 26 27.535011930369564 22.083062962716955 23.159734108594463 27.222190998319018 27 27.183104348581384 20.68629003826915 23.26166595987104 28.868939653278424 28 29.76116268732213 21.78735840669531 22.294143644715128 26.157335261267427 29 30.326258564574722 22.177266897950634 22.24068690316219 25.25578763431246 30 28.417846504427263 21.619324133068325 23.133612475027974 26.82921688747643 31 30.340245453941623 22.840718070294656 21.60987180600759 25.209164669756127 32 31.03799324541818 22.684690806717793 22.97566919920907 23.30164674865496 33 31.602769787297095 21.977171352806828 22.731186037124655 23.688872822771422 34 28.927761229109077 23.800193134033997 23.86795610032751 23.404089536529412 35 28.872771677762504 24.054511825627557 25.151556568345434 21.9211599282645 36 29.935711402572057 23.251447227913488 22.71400579402102 24.09883557549344 37 29.324950566884155 24.835925485006566 21.42963892110628 24.409485027003 38 29.861497861730342 24.645410001072968 22.07195009171312 23.421142045483574 39 29.444126528339098 23.783715428752448 21.57800213571498 25.194155907193476 40 29.009127882321085 24.099538113315518 22.400610058297865 24.490723946065533 41 27.36052708219437 24.17637020422136 23.096122502158707 25.366980211425567 42 25.99409101824555 23.859334045238327 22.750090691246122 27.396484245270003 43 26.424363500733193 22.507331940179544 25.609036424670062 25.4592681344172 44 26.73003132041345 22.144758556910674 24.097430499849274 27.027779622826603 45 27.307581277239308 22.163854812256346 24.3673327576781 26.161231152826247 46 27.933287008415125 22.93824309341454 23.389400109340432 25.739069788829905 47 26.99060898533101 23.270862818632835 23.533420362867172 26.205107833168984 48 27.74986076977708 23.66000490499134 23.564204292889297 25.025930032342288 49 27.242436861009917 23.18604734338516 24.736356715495177 24.83515908010975 50 26.632761765592505 23.29328016186471 24.46881753943153 25.605140533111246 51 25.920899350599587 23.698005814458483 23.881112717722857 26.499982117219073 52 26.175281909267877 24.528533254308474 23.47996362131423 25.81622121510942 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 8.0 2 16.0 3 17.5 4 19.0 5 33.0 6 47.0 7 891.5 8 1736.0 9 2665.0 10 3594.0 11 4219.0 12 4844.0 13 4168.0 14 3232.5 15 2973.0 16 3567.0 17 4161.0 18 3784.5 19 3408.0 20 4794.5 21 6181.0 22 6894.5 23 7608.0 24 8254.5 25 8901.0 26 12774.0 27 16647.0 28 18034.5 29 19422.0 30 18206.5 31 16991.0 32 20257.5 33 23524.0 34 25871.5 35 28219.0 36 30345.5 37 32472.0 38 35346.5 39 38493.0 40 38765.0 41 43532.0 42 48299.0 43 51521.0 44 54743.0 45 58829.0 46 62915.0 47 68344.5 48 73774.0 49 81109.5 50 88445.0 51 92183.0 52 95921.0 53 104970.5 54 114020.0 55 133462.0 56 152904.0 57 136971.5 58 121039.0 59 124420.5 60 127802.0 61 116083.0 62 104364.0 63 93944.0 64 68301.5 65 53079.0 66 43477.0 67 33875.0 68 32700.5 69 31526.0 70 32876.5 71 34227.0 72 24990.0 73 15753.0 74 10239.5 75 4726.0 76 3495.0 77 2264.0 78 1537.5 79 811.0 80 587.5 81 364.0 82 239.0 83 114.0 84 63.5 85 13.0 86 9.5 87 6.0 88 4.5 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1565752.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.276719475865985 #Duplication Level Percentage of deduplicated Percentage of total 1 70.38678577743126 6.529584664651034 2 9.251109957603829 1.7163990383416232 3 4.008706125016897 1.1156292654890252 4 2.2108559889554185 0.8203796324431072 5 1.2038768939684743 0.5584014114411197 6 0.776498306289569 0.4322014176560036 7 0.5451030877806006 0.35397379015382874 8 0.39488435401916555 0.2930585102115481 9 0.32924642063382253 0.27488940143876506 >10 4.686337394234408 11.86897729734149 >50 3.671352145636006 24.648626549145337 >100 2.4175013847201834 38.90391040047438 >500 0.07505202248205639 4.7061120121625155 >1k 0.04062448923340667 6.245305806115583 >5k 0.0020656519949189835 1.532550802934637 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 9655 0.6166366065634915 No Hit GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8709 0.5562183538644689 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5629 0.35950776368160475 No Hit GAATTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3368 0.2151043077064567 No Hit GAATTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3297 0.21056974540029327 No Hit GAATTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3155 0.2015006207879664 No Hit GAATTAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2843 0.18157409347074122 No Hit GAATTAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2779 0.17748660068772065 No Hit GAATTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2735 0.17467644939939403 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2496 0.15941221853780163 No Hit GAATTAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 2447 0.15628273187580152 No Hit GAATTAGGGGTGCAGTGCTGAATTGGGGGCCAACCAGTAGAACACCCATTTA 2406 0.15366418181167898 No Hit GAATTAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 2234 0.14267904495731126 No Hit GAATTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2218 0.14165717176155612 No Hit GAATTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2151 0.13737807775433147 No Hit GAATTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2063 0.1317577751776782 No Hit GAATTAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 2013 0.12856442144094338 No Hit GAATTAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 1964 0.12543493477894327 No Hit GAATTAGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 1906 0.1217306444443309 No Hit GAATTAGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCT 1876 0.11981463220229001 No Hit GAATTAGGGACTTGGGTGTATATTGTTAATTATTCTTTTGGATTCTTTTGAA 1860 0.11879275900653488 No Hit GAATTAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1815 0.11591874064347356 No Hit GAATTAGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 1790 0.11432206377510615 No Hit GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1752 0.1118951149351877 No Hit GAATTAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 1744 0.11138417833731011 No Hit GAATTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1735 0.11080937466469785 No Hit GAATTAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAAA 1668 0.1065302806574732 No Hit GAATTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1641 0.10480586963963641 No Hit GAATTAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 1622 0.1035923952196772 No Hit GAATTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1614 0.10308145862179961 No Hit GAATTAGGGGGACAGGGACTTCTAACCGACTGGCCTGCTGCTAATGCAGGAC 1578 0.10078224393135055 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0366597008977156 0.0 0.0 0.0 0.0 7 0.04247160469857295 0.0 0.0 0.0 0.0 8 0.04898604632151196 0.0 0.0 0.0 0.0 9 0.08628441796657453 0.0 0.0 0.0 0.0 10 0.1520036378685769 0.0 0.0 0.0 0.0 11 0.2083343977845789 0.0 0.0 0.0 0.0 12 0.23158201298800832 0.0 0.0 0.0 0.0 13 0.24716557922327417 0.0 0.0 0.0 0.0 14 0.2683055809604586 0.0 0.0 0.0 0.0 15 0.29596002432058205 0.0 0.0 0.0 0.0 16 0.32303966400809325 0.0 0.0 0.0 0.0 17 0.34405193159580827 0.0 0.0 0.0 0.0 18 0.3639145918382988 0.0 0.0 0.0 0.0 19 0.3817973727640137 0.0 0.0 0.0 0.0 20 0.4001910902876062 0.0 0.0 0.0 0.0 21 0.4182654724375252 0.0 0.0 0.0 0.0 22 0.4386390692778933 0.0 0.0 0.0 0.0 23 0.4612480137339757 0.0 0.0 0.0 0.0 24 0.4866671094783848 0.0 0.0 0.0 0.0 25 0.5061465672724672 0.0 0.0 0.0 0.0 26 0.5308631251947946 0.0 0.0 0.0 0.0 27 0.5522585952309178 0.0 0.0 0.0 0.0 28 0.5769751531532452 0.0 0.0 0.0 0.0 29 0.5958798072747152 0.0 0.0 0.0 0.0 30 0.6153592650687976 0.0 0.0 0.0 0.0 31 0.6343916533397371 0.0 0.0 0.0 0.0 32 0.654382047731697 0.0 0.0 0.0 0.0 33 0.6721370945079425 0.0 0.0 0.0 0.0 34 0.6883593314905553 0.0 0.0 0.0 0.0 35 0.7082858588077805 0.0 0.0 0.0 0.0 36 0.7254661019114138 0.0 0.0 0.0 0.0 37 0.7437959523602716 0.0 0.0 0.0 0.0 38 0.7625728723322723 0.0 0.0 0.0 0.0 39 0.7805195203327219 0.0 0.0 0.0 0.0 40 0.7999989781268042 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATTA 35 1.0198892E-7 46.000004 14 TACGCAC 35 1.0198892E-7 46.000004 20 ATACGGT 35 1.0198892E-7 46.000004 10 AACGTTA 30 1.8618375E-6 46.0 43 TAATACG 20 6.312158E-4 46.0 21 CGAGTAT 25 3.417727E-5 46.0 33 ATTCGAG 25 3.417727E-5 46.0 46 TACGGTT 30 1.8618375E-6 46.0 40 TATGCGT 20 6.312158E-4 46.0 31 GTCGTAC 40 5.6134013E-9 46.0 38 CGAATAG 25 3.417727E-5 46.0 35 CATAACG 20 6.312158E-4 46.0 28 ACGTAAC 40 5.6134013E-9 46.0 11 GACGATA 25 3.417727E-5 46.0 44 CGCAATT 20 6.312158E-4 46.0 43 TATCGGG 30 1.8618375E-6 46.0 31 AACCGAC 160 0.0 44.5625 24 TAGGGAT 13725 0.0 43.720947 5 AGGGATT 4520 0.0 43.20133 6 TAGGGGA 29030 0.0 43.052708 5 >>END_MODULE