##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527646_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1578304 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.880384894164877 31.0 31.0 33.0 30.0 34.0 2 31.123253188232432 31.0 31.0 33.0 30.0 34.0 3 32.16835413203033 33.0 31.0 34.0 31.0 34.0 4 36.16323344552127 37.0 35.0 37.0 35.0 37.0 5 36.35973614715543 37.0 37.0 37.0 35.0 37.0 6 36.04835126819675 37.0 35.0 37.0 35.0 37.0 7 36.25678576497303 37.0 35.0 37.0 35.0 37.0 8 36.52249946778314 37.0 37.0 37.0 35.0 37.0 9 38.637531172701834 39.0 39.0 39.0 38.0 39.0 10 37.97488253213576 39.0 38.0 39.0 35.0 39.0 11 37.64909421759053 39.0 38.0 39.0 35.0 39.0 12 37.31802174992904 39.0 37.0 39.0 35.0 39.0 13 37.08485754328697 39.0 37.0 39.0 34.0 39.0 14 38.058979765621835 40.0 38.0 40.0 34.0 40.0 15 38.12287239974048 40.0 38.0 40.0 34.0 40.0 16 38.17587929828474 40.0 38.0 40.0 34.0 40.0 17 38.16586855257289 40.0 38.0 40.0 34.0 40.0 18 38.154889045456386 40.0 38.0 40.0 34.0 40.0 19 38.11100586452293 40.0 38.0 40.0 34.0 40.0 20 38.12494044239893 40.0 38.0 40.0 34.0 40.0 21 38.13393300656907 40.0 38.0 40.0 34.0 40.0 22 38.01662734175419 40.0 38.0 40.0 34.0 40.0 23 37.99339100705568 40.0 38.0 40.0 34.0 40.0 24 37.986145254653096 40.0 38.0 40.0 34.0 40.0 25 37.874291011110664 40.0 37.0 40.0 34.0 40.0 26 37.684511348890965 40.0 37.0 40.0 33.0 40.0 27 37.619132942703054 40.0 37.0 40.0 33.0 40.0 28 37.500545522282145 40.0 37.0 40.0 33.0 40.0 29 37.432502863833584 40.0 36.0 40.0 33.0 40.0 30 37.30176315842829 40.0 36.0 40.0 33.0 40.0 31 37.21061848667937 40.0 36.0 40.0 33.0 40.0 32 37.08894864360732 39.0 36.0 40.0 32.0 40.0 33 36.79112198917319 39.0 35.0 40.0 31.0 40.0 34 36.785931607599046 39.0 35.0 40.0 31.0 40.0 35 36.70951920542557 39.0 35.0 40.0 31.0 40.0 36 36.51645880641499 39.0 35.0 40.0 31.0 40.0 37 36.42311430497547 39.0 35.0 40.0 31.0 40.0 38 36.06007587891813 38.0 35.0 40.0 30.0 40.0 39 36.113104953164914 38.0 35.0 40.0 30.0 40.0 40 35.94604017983861 38.0 35.0 40.0 30.0 40.0 41 35.608786393495805 38.0 35.0 40.0 29.0 40.0 42 35.63190044503467 38.0 35.0 40.0 29.0 40.0 43 35.614083218442076 38.0 34.0 40.0 29.0 40.0 44 35.44706849884433 38.0 34.0 40.0 29.0 40.0 45 35.35393308260006 38.0 34.0 40.0 28.0 40.0 46 34.991703119297675 37.0 34.0 40.0 27.0 40.0 47 34.76115944710271 37.0 34.0 40.0 26.0 40.0 48 34.71897682575727 37.0 33.0 40.0 26.0 40.0 49 34.58283765358258 36.0 33.0 40.0 27.0 40.0 50 34.43698045496939 36.0 33.0 39.0 26.0 40.0 51 34.692974230566485 36.0 34.0 40.0 27.0 40.0 52 34.4415587871538 36.0 33.0 40.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 6.0 15 8.0 16 30.0 17 77.0 18 211.0 19 434.0 20 789.0 21 1463.0 22 2327.0 23 3576.0 24 5562.0 25 7520.0 26 10011.0 27 13500.0 28 17636.0 29 21749.0 30 27077.0 31 33817.0 32 43754.0 33 61819.0 34 101243.0 35 117217.0 36 176230.0 37 275159.0 38 505935.0 39 151151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.72578159847532 0.20471341389238068 0.05087739751023884 0.018627590122055067 8 99.39606058148493 0.5158068407607153 0.06348586837516726 0.024646709379181703 9 98.9228944487247 0.6020386440128138 0.19825078058472892 0.2768161266777503 10 59.82529347958315 29.4970423948745 3.465808868253518 7.211855257288836 11 32.5297281132152 26.825630550261547 21.367619926199264 19.277021410323993 12 29.80382739953773 17.941347167592557 27.110049774948298 25.144775657921414 13 23.96509164267467 18.322452455293785 30.6907921414379 27.02166376059365 14 25.79800849519484 18.970299764810836 30.650749158590486 24.580942581403836 15 26.063990207209763 18.890720672316615 28.693458294473057 26.351830826000565 16 28.599496674911805 19.809301630104212 26.517388285146588 25.0738134098374 17 30.30708912858359 20.14630894935323 22.85041411540489 26.696187806658283 18 27.439073841287865 21.19762732654799 25.0002534366003 26.363045395563844 19 28.53353979968371 20.862774218401526 24.584744130408335 26.018941851506426 20 27.876632131705932 21.861314423583796 23.68865567089737 26.5733977738129 21 28.48481661327602 21.459744130408335 25.850976744657554 24.204462511658082 22 29.642198207696364 21.65413000283849 23.39821732695349 25.305454462511655 23 28.21243562710352 22.866127184623494 24.228348911236367 24.69308827703662 24 29.357588905559385 21.557253862373788 23.728508576294555 25.356648655772275 25 29.265718137950607 22.526965654271926 23.232976663557846 24.974339544219617 26 27.5731418028466 22.01591074976684 23.199649750618384 27.211297696768177 27 27.15174009569766 20.62581099712096 23.295828940432262 28.92661996674912 28 29.856288775799843 21.724458659421757 22.311924698917316 26.107327865861073 29 30.360120737196382 22.188120919670734 22.196864482381088 25.254893860751793 30 28.496601415189975 21.56536383358339 23.10486446210616 26.833170289120474 31 30.271734722841735 22.7920603381858 21.60787782328373 25.328327115688737 32 31.08342879445278 22.682132212805644 22.975104922752525 23.259334069989052 33 31.53492609788735 21.962942500304123 22.8016909289972 23.70044047281132 34 28.949872774826652 23.747326243866834 23.9059141965046 23.396886784801914 35 28.865478386926725 24.02407901139451 25.237723531081464 21.8727190705973 36 30.067274745549653 23.153524289363773 22.722048477352903 24.057152487733667 37 29.39503416325372 24.81727221118365 21.419194274360326 24.368499351202303 38 29.959374112971897 24.592790742467866 22.040367381695795 23.407467762864442 39 29.436787843153155 23.78325088195937 21.55034771501561 25.22961355987186 40 29.028754916670046 24.068113620696646 22.318894205425572 24.584237257207736 41 27.612614553343334 24.106699343092334 23.081294858278252 25.19939124528608 42 25.95558270143141 23.81417014719598 22.812588702810103 27.41765844856251 43 26.44896040306557 22.46398665909736 25.64379232391225 25.443260613924824 44 26.827594683913876 22.098594440614736 24.073815944203396 26.999994931267995 45 27.263695713880214 22.089217286403635 24.393399497181786 26.25368750253437 46 28.07925469364584 22.856813389562465 23.426855662787396 25.6370762540043 47 27.277698086046794 23.253441669032075 23.515305036292123 25.95355520862901 48 27.775701005636428 23.610723916305094 23.566245792952433 25.04732928510604 49 27.275037001743645 23.145984550504846 24.656530047443333 24.922448400308177 50 26.655257795709826 23.28195328656583 24.395553708284336 25.66723520944001 51 25.9363215198086 23.686564818944895 23.911046287660678 26.466067373585823 52 26.260530290742466 24.404677425895137 23.51758596569482 25.817206317667573 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 7.5 2 15.0 3 19.5 4 24.0 5 38.5 6 53.0 7 811.5 8 1570.0 9 2510.5 10 3451.0 11 4039.0 12 4627.0 13 4083.0 14 3311.5 15 3084.0 16 3542.5 17 4001.0 18 3771.5 19 3542.0 20 4815.5 21 6089.0 22 6856.0 23 7623.0 24 8299.5 25 8976.0 26 12816.0 27 16656.0 28 17954.5 29 19253.0 30 18205.5 31 17158.0 32 20123.0 33 23088.0 34 25699.0 35 28310.0 36 30718.0 37 33126.0 38 35894.0 39 39044.0 40 39426.0 41 43948.5 42 48471.0 43 51870.5 44 55270.0 45 59559.5 46 63849.0 47 69088.5 48 74328.0 49 81461.0 50 88594.0 51 92772.5 52 96951.0 53 106515.0 54 116079.0 55 134885.0 56 153691.0 57 138564.5 58 123438.0 59 126011.0 60 128584.0 61 117011.5 62 105439.0 63 94348.5 64 68488.5 65 53719.0 66 44150.0 67 34581.0 68 33265.0 69 31949.0 70 32731.5 71 33514.0 72 24676.5 73 15839.0 74 10357.0 75 4875.0 76 3598.5 77 2322.0 78 1566.0 79 810.0 80 565.5 81 321.0 82 222.5 83 124.0 84 70.0 85 16.0 86 11.0 87 6.0 88 4.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1578304.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.475592740373841 #Duplication Level Percentage of deduplicated Percentage of total 1 71.60176405606595 7.50070919743685 2 9.46321505936349 1.9826557395292919 3 3.971777853337599 1.2482018174040286 4 1.9791599249822205 0.8293149336873035 5 1.152893314527336 0.6038620418044048 6 0.7579459781344531 0.47639600316844966 7 0.5415704253062682 0.3971289851017662 8 0.36998916902673784 0.3100684682458756 9 0.26576681936668733 0.2505658467230924 >10 4.473147987340395 12.892354963198782 >50 3.2675903159267445 24.60507365008328 >100 2.056674549847901 37.079877539012266 >500 0.062114332042386276 4.429255030663298 >1k 0.03450796224577015 5.898881718385978 >5k 0.0018822524861329174 1.4956540655553348 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 8996 0.569978914074855 No Hit GAATTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 8574 0.5432413527431978 No Hit GAATTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5186 0.3285805522890394 No Hit GAATTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3408 0.21592798345565875 No Hit GAATTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3038 0.19248509792790236 No Hit GAATTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 2825 0.17898959896192368 No Hit GAATTAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 2711 0.17176665585337172 No Hit GAATTAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2579 0.16340324804346945 No Hit GAATTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2430 0.15396273468229188 No Hit GAATTAGGGGATAGTAGAGGCCACAGGAAGACCGTCGTGGAGAAGCCCCGAT 2368 0.1500344673776408 No Hit GAATTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2364 0.14978103077734076 No Hit GAATTAGGGGTGCAGTGCTGAATTGGGGGCCAACCAGTAGAACACCCATTTA 2262 0.14331839746968897 No Hit GAATTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 2088 0.132293905356636 No Hit GAATTAGGGGCTCTTTCGAGTCTTGGCTCCAAGATGACCAAAAAAAGAAGAA 2086 0.13216718705648595 No Hit GAATTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2029 0.12855571550220996 No Hit GAATTAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 2021 0.12804884230160982 No Hit GAATTAGGGGCTCTTTCCAGCCAGCGCCGAGCGATGGGCATCTCTCGGGACA 2005 0.12703509590040954 No Hit GAATTAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1931 0.12234651879485829 No Hit GAATTAGGGACTTGGGTGTATATTGTTAATTATTCTTTTGGATTCTTTTGAA 1863 0.11803809658975711 No Hit GAATTAGGGGCTCTTCGGACTTGGGCTTGGGTTCCGGCGACATGGCTAAACG 1827 0.11575716718705649 No Hit GAATTAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 1786 0.11315944203398078 No Hit GAATTAGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCT 1750 0.11087851263128015 No Hit GAATTAGGGGCTCTTGAGTCACCCCCGCGCAGCCTAGGCTTGCCGTGCGAGT 1710 0.10834414662827949 No Hit GAATTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1691 0.10714032277685415 No Hit GAATTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1652 0.10466931592392847 No Hit GAATTAGGGGGACAGGGACTTCTAACCGACTGGCCTGCTGCTAATGCAGGAC 1633 0.10346549207250315 No Hit GAATTAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAAAA 1626 0.10302197802197803 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.035354405741859614 0.0 0.0 0.0 0.0 7 0.04099337009853615 0.0 0.0 0.0 0.0 8 0.047456003406187906 0.0 0.0 0.0 0.0 9 0.08186002189692226 0.0 0.0 0.0 0.0 10 0.1488940026762905 0.0 0.0 0.0 0.0 11 0.19932788613600422 0.0 0.0 0.0 0.0 12 0.22194710271278537 0.0 0.0 0.0 0.0 13 0.23689986213048944 0.0 0.0 0.0 0.0 14 0.2568579944041199 0.0 0.0 0.0 0.0 15 0.2857497668383277 0.0 0.0 0.0 0.0 16 0.31058655366773447 0.0 0.0 0.0 0.0 17 0.3328256153440655 0.0 0.0 0.0 0.0 18 0.35348069826852113 0.0 0.0 0.0 0.0 19 0.37451593609342687 0.0 0.0 0.0 0.0 20 0.39453742751713233 0.0 0.0 0.0 0.0 21 0.41310165848911234 0.0 0.0 0.0 0.0 22 0.43299643161266776 0.0 0.0 0.0 0.0 23 0.45561564818944894 0.0 0.0 0.0 0.0 24 0.47785470986578 0.0 0.0 0.0 0.0 25 0.4975594055391103 0.0 0.0 0.0 0.0 26 0.5192282348647662 0.0 0.0 0.0 0.0 27 0.5421008880418474 0.0 0.0 0.0 0.0 28 0.5645933863184786 0.0 0.0 0.0 0.0 29 0.580940047037833 0.0 0.0 0.0 0.0 30 0.6006447427111634 0.0 0.0 0.0 0.0 31 0.6181952272819431 0.0 0.0 0.0 0.0 32 0.6389770285065488 0.0 0.0 0.0 0.0 33 0.6560206398767284 0.0 0.0 0.0 0.0 34 0.672810814646608 0.0 0.0 0.0 0.0 35 0.6935926158712137 0.0 0.0 0.0 0.0 36 0.7115866144925186 0.0 0.0 0.0 0.0 37 0.7290103807631483 0.0 0.0 0.0 0.0 38 0.7489051538867038 0.0 0.0 0.0 0.0 39 0.7668357933579336 0.0 0.0 0.0 0.0 40 0.7856534609302137 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTT 35 1.0198892E-7 46.000004 40 TCGCATC 30 1.8618484E-6 46.0 18 CCGATTA 25 3.41774E-5 46.0 14 CCGATGC 20 6.312173E-4 46.0 21 ATAGCGA 20 6.312173E-4 46.0 21 CGATTAC 20 6.312173E-4 46.0 26 ATCGTCA 25 3.41774E-5 46.0 10 ATAAGGT 20 6.312173E-4 46.0 34 CGTACTG 25 3.41774E-5 46.0 17 TCCCGTA 40 5.6134013E-9 46.0 31 TATAGGC 20 6.312173E-4 46.0 23 CCTATCG 25 3.41774E-5 46.0 24 TCGACGA 25 3.41774E-5 46.0 21 CGTTTAG 30 1.8618484E-6 46.0 13 GCGTAAC 25 3.41774E-5 46.0 35 GTCGGTA 20 6.312173E-4 46.0 41 TAGGGAT 14020 0.0 43.621254 5 AGGGATT 4895 0.0 43.180798 6 TAGGGAG 16705 0.0 43.177494 5 TTAGGGA 48755 0.0 43.046867 4 >>END_MODULE