##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527641_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1518764 Sequences flagged as poor quality 0 Sequence length 52 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49062461317229 31.0 31.0 33.0 30.0 34.0 2 32.16683105472608 31.0 31.0 34.0 31.0 34.0 3 32.76664313876284 34.0 31.0 34.0 31.0 34.0 4 36.34053282801015 37.0 37.0 37.0 35.0 37.0 5 33.520874869301615 35.0 33.0 35.0 30.0 35.0 6 35.17141372853189 35.0 35.0 37.0 33.0 37.0 7 36.075889341596195 37.0 35.0 37.0 35.0 37.0 8 36.540876001801465 37.0 37.0 37.0 35.0 37.0 9 38.62981477043174 39.0 39.0 39.0 37.0 39.0 10 37.97045821470617 39.0 38.0 39.0 35.0 39.0 11 37.524675986525885 39.0 37.0 39.0 35.0 39.0 12 36.859064344427445 39.0 35.0 39.0 33.0 39.0 13 36.736313871016165 39.0 35.0 39.0 33.0 39.0 14 37.51587738450477 40.0 37.0 40.0 33.0 40.0 15 37.55281597404205 40.0 37.0 40.0 33.0 40.0 16 37.56990618687301 40.0 36.0 40.0 33.0 40.0 17 37.43381657716406 40.0 36.0 40.0 33.0 40.0 18 37.37528806318822 39.0 36.0 40.0 33.0 40.0 19 37.354501423525974 39.0 36.0 40.0 33.0 40.0 20 37.27398924388516 39.0 36.0 40.0 32.0 40.0 21 37.24140880347441 39.0 36.0 40.0 32.0 40.0 22 37.20293475484012 39.0 35.0 40.0 32.0 40.0 23 37.148469413286065 39.0 35.0 40.0 32.0 40.0 24 37.06304073575618 39.0 35.0 40.0 32.0 40.0 25 36.98323241793985 39.0 35.0 40.0 32.0 40.0 26 36.804882127835526 39.0 35.0 40.0 32.0 40.0 27 36.66231949137588 38.0 35.0 40.0 31.0 40.0 28 36.49693434924715 38.0 35.0 40.0 31.0 40.0 29 36.3246231804283 38.0 35.0 40.0 31.0 40.0 30 36.18203157304229 38.0 35.0 40.0 31.0 40.0 31 36.007126189454056 38.0 35.0 40.0 30.0 40.0 32 35.86726048286633 38.0 34.0 40.0 30.0 40.0 33 35.61625703532609 37.0 34.0 40.0 30.0 40.0 34 35.234503846548904 37.0 34.0 40.0 28.0 40.0 35 35.07050009086336 37.0 33.0 40.0 28.0 40.0 36 35.07129086546692 37.0 33.0 40.0 28.0 40.0 37 34.90676760839735 36.0 33.0 39.0 28.0 40.0 38 34.79533028172909 36.0 33.0 39.0 28.0 40.0 39 34.61538198166404 36.0 33.0 39.0 27.0 40.0 40 34.30197713403794 35.0 33.0 39.0 26.0 40.0 41 34.115472186593834 35.0 33.0 39.0 26.0 40.0 42 34.01303230785033 35.0 33.0 39.0 26.0 40.0 43 33.846683223990034 35.0 33.0 38.0 26.0 40.0 44 33.69420594641432 35.0 33.0 38.0 26.0 40.0 45 33.53018638840531 35.0 32.0 38.0 25.0 40.0 46 33.30238206857682 35.0 32.0 38.0 24.0 40.0 47 33.11885980968735 35.0 32.0 37.0 24.0 40.0 48 32.895124588151944 35.0 31.0 37.0 23.0 40.0 49 33.346593019060236 35.0 32.0 37.0 26.0 40.0 50 33.54893189461957 35.0 33.0 37.0 26.0 40.0 51 33.5776275971777 35.0 33.0 37.0 27.0 40.0 52 33.11633670537358 35.0 32.0 36.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 4.0 14 15.0 15 33.0 16 69.0 17 157.0 18 275.0 19 623.0 20 1100.0 21 1951.0 22 3040.0 23 4716.0 24 6867.0 25 9518.0 26 12601.0 27 17573.0 28 22716.0 29 28855.0 30 37400.0 31 47665.0 32 62770.0 33 89700.0 34 159943.0 35 170163.0 36 234645.0 37 275379.0 38 296646.0 39 34339.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.07918544289961 0.650199767705845 0.20187468230745526 0.0687401070870787 8 99.10018936450956 0.6195827659860255 0.13273951713366922 0.1474883523707436 9 96.8523746941592 1.6246763815839722 0.7423799879375598 0.7805689363192702 10 60.82926642980739 26.273074684414432 5.439686481902389 7.457972403875783 11 39.16579534410876 23.473232180904997 18.845126695128407 18.51584577985783 12 31.073359652980976 15.905762843996829 27.1583998567256 25.862477646296593 13 24.99789302353756 16.640373356229144 29.86138728597728 28.500346334256015 14 26.26240811607333 16.906576663655446 30.679881798620457 26.151133421650762 15 27.324060881084883 17.47552615152848 28.958942929908794 26.241470037477843 16 32.77316291405379 18.00668174910651 25.002962935650302 24.21719240118939 17 32.395619069190474 18.69158078542815 23.970873684127355 24.94192646125402 18 31.68550215833401 19.127264012051906 23.157909984698083 26.029323844915996 19 31.860381204716465 20.029774211134843 21.605002488865946 26.504842095282743 20 30.81018512421943 21.53046819650716 21.561282727270335 26.098063952003077 21 31.807640950141035 20.747199696595388 23.804290857565757 23.640868495697816 22 30.81051433929169 19.69298719221683 24.23187539341201 25.264623075079474 23 31.626967718486874 18.81576071068316 23.731205111524897 25.826066459305064 24 32.060083067547026 19.02863117640397 22.508302804122298 26.402982951926695 25 30.019081305587964 19.45483300894675 22.18784485278819 28.338240832677098 26 27.80629511892565 19.139774184797638 23.014503899223314 30.03942679705339 27 27.793060673020957 18.42866962872441 23.991416704636137 29.786852993618496 28 30.777658675080527 20.80204692763326 20.4763873781575 27.943907019128712 29 31.459265560679604 20.299335512298157 21.36230513759873 26.879093789423504 30 31.032010239905606 18.620733701878635 23.255160117042543 27.092095941173216 31 32.32786660732016 19.968210992622947 21.60961149987753 26.09431090017936 32 35.48964816126798 19.620033132204874 20.3285698107145 24.56174889581265 33 34.646989262321206 18.9764835089586 22.104421753478487 24.27210547524171 34 29.93987215920314 21.942579623957375 25.78438783115744 22.333160385682042 35 30.40485552725769 24.14437002720633 24.04211582576358 21.408658619772396 36 30.681659560010637 25.47479397720778 20.773273530318072 23.070272932463503 37 31.223350039900865 25.205166833030017 20.087781906866372 23.483701220202743 38 32.70172324337422 24.05811567827523 20.18904846309236 23.051112615258194 39 31.895278002375616 22.699971819189816 19.914878150917456 25.489872027517112 40 29.754260701465142 21.888785881150724 21.82768356373999 26.52926985364415 41 27.68790937894235 22.62181616103621 22.118182943498795 27.572091516522647 42 26.718173462104712 20.700648685378372 23.011211748500752 29.56996610401616 43 27.125214977442187 19.13667956311843 24.273685707588537 29.464419751850844 44 27.62417334095357 19.231559346942646 23.86190349521058 29.28236381689321 45 28.392890534671615 20.280701939208463 23.79197821386338 27.53442931225655 46 28.30762383095728 22.369505729659117 22.39064133729796 26.932229102085643 47 26.99280467538077 21.437892918188737 24.208830338354083 27.360472068076408 48 29.53131625453329 20.302693506035173 24.39483685417879 25.77115338525274 49 28.390717715194725 20.117411263369426 25.481049063580645 26.0108219578552 50 26.725942937809954 20.778080070373015 23.99892280828358 28.497054183533454 51 26.046838086760022 21.214553413170183 24.45119847454904 28.287410025520753 52 27.238267433254936 21.383835803324285 24.48174963325441 26.89614713016637 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 5.5 8 11.0 9 27.0 10 43.0 11 47.0 12 51.0 13 412.5 14 1289.5 15 1805.0 16 1978.5 17 2152.0 18 2209.0 19 2266.0 20 2345.0 21 2424.0 22 2451.0 23 2478.0 24 2487.5 25 2497.0 26 2807.5 27 3118.0 28 3516.0 29 3914.0 30 4962.5 31 6011.0 32 6756.0 33 7501.0 34 8264.0 35 9027.0 36 10185.0 37 11343.0 38 13779.0 39 16059.0 40 15903.0 41 18003.0 42 20103.0 43 23518.0 44 26933.0 45 31090.5 46 35248.0 47 35584.5 48 35921.0 49 42714.0 50 49507.0 51 50340.5 52 51174.0 53 53854.5 54 56535.0 55 64852.0 56 73169.0 57 84636.0 58 96103.0 59 109139.0 60 122175.0 61 140088.0 62 158001.0 63 154974.0 64 156727.0 65 161507.0 66 137836.0 67 114165.0 68 100204.5 69 86244.0 70 72824.5 71 59405.0 72 51681.5 73 43958.0 74 38441.0 75 32924.0 76 31925.0 77 30926.0 78 22847.5 79 14769.0 80 10585.0 81 6401.0 82 4707.0 83 3013.0 84 1882.5 85 752.0 86 474.0 87 196.0 88 134.5 89 57.0 90 41.0 91 34.0 92 27.0 93 18.5 94 10.0 95 7.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1518764.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.306722333360758 #Duplication Level Percentage of deduplicated Percentage of total 1 68.11001610584836 5.657709919120115 2 9.54697244399439 1.5860809843301589 3 4.272758391309155 1.0647785266242704 4 2.152134786661393 0.7150874438705114 5 1.1956001306935373 0.49657591537005236 6 0.7895388498301132 0.3935087998163861 7 0.5189998206734124 0.30178311809786446 8 0.37870319901424315 0.25166258567734223 9 0.31689478756816397 0.23691213082962728 >10 5.692930264047759 13.537613837772755 >50 4.456265574483768 26.366078874316575 >100 2.4242084725191697 34.792389496459954 >500 0.09506699892232039 5.299841663446295 >1k 0.04594904947912152 6.414233154460135 >5k 0.0031688999640773464 1.7666796957456912 >10k+ 7.922249910193366E-4 1.1190638540622617 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17005 1.119660460743078 No Hit AGGGTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7578 0.4989583635113816 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 7221 0.4754524073522943 No Hit AGGGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6484 0.42692610570174166 No Hit AGGGTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5563 0.36628468939216363 No Hit AGGGTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4793 0.3155855682647205 No Hit AGGGTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4099 0.2698905162355705 No Hit AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4050 0.2666642085274605 No Hit AGGGTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3239 0.21326552380751718 No Hit AGGGTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3203 0.21089517528727308 No Hit AGGGTCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 2682 0.17659096475818495 No Hit AGGGTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2635 0.17349634307897738 No Hit AGGGTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2603 0.1713893666165382 No Hit AGGGTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2531 0.16664866957605 No Hit AGGGTCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2322 0.15288747955574403 No Hit AGGGTCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 2141 0.14096989394007234 No Hit AGGGTCGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAAGAACCGACTGCTC 2056 0.13537323771171822 No Hit AGGGTCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 2043 0.13451727852385229 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT 2033 0.13385884837934003 No Hit AGGGTCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1933 0.12727454693421755 No Hit AGGGTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1915 0.1260893726740955 No Hit AGGGTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1909 0.12569431458738817 No Hit AGGGTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1856 0.12220463482147326 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGCGGGGAAAAGCTCCGACTGCTCT 1695 0.11160390949482606 No Hit AGGGTCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 1689 0.11120885140811872 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1625 0.10699489848324031 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 1620 0.1066656834109842 No Hit AGGGTCGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1542 0.10152992828378866 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0018436044046342948 0.0 0.0 0.0 0.0 8 0.0028970926358538917 0.0 0.0 0.0 0.0 9 0.003621365794817365 0.0 0.0 0.0 0.0 10 0.014024562078110885 0.0 0.0 0.0 0.0 11 0.023176741086831133 0.0 0.0 0.0 0.0 12 0.029431827459697493 0.0 0.0 0.0 0.0 13 0.037332989193844465 0.0 0.0 0.0 0.0 14 0.04503662188463777 0.0 0.0 0.0 0.0 15 0.054847231037870266 0.0 0.0 0.0 0.0 16 0.06676481665354196 0.0 0.0 0.0 0.0 17 0.076443739777872 0.0 0.0 0.0 0.0 18 0.08566176180104348 0.0 0.0 0.0 0.0 19 0.09876452167683722 0.0 0.0 0.0 0.0 20 0.10883850288787461 0.0 0.0 0.0 0.0 21 0.11911001314226569 0.0 0.0 0.0 0.0 22 0.12938152339665676 0.0 0.0 0.0 0.0 23 0.14149663805568213 0.0 0.0 0.0 0.0 24 0.1513072472089146 0.0 0.0 0.0 0.0 25 0.161381228419952 0.0 0.0 0.0 0.0 26 0.17086262250092837 0.0 0.0 0.0 0.0 27 0.18106828974086822 0.0 0.0 0.0 0.0 28 0.19173485808196666 0.0 0.0 0.0 0.0 29 0.2011504091484918 0.0 0.0 0.0 0.0 30 0.21056596021501695 0.0 0.0 0.0 0.0 31 0.22037656936824945 0.0 0.0 0.0 0.0 32 0.23071392263709173 0.0 0.0 0.0 0.0 33 0.2393393575302022 0.0 0.0 0.0 0.0 34 0.2513227861603251 0.0 0.0 0.0 0.0 35 0.2640304879494115 0.0 0.0 0.0 0.0 36 0.2749604283483148 0.0 0.0 0.0 0.0 37 0.2850344095593522 0.0 0.0 0.0 0.0 38 0.29379153048136514 0.0 0.0 0.0 0.0 39 0.3038655116924025 0.0 0.0 0.0 0.0 40 0.3139394929034399 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTAC 35 1.0198528E-7 46.000004 16 TCGTTAA 20 6.312099E-4 46.0 45 CAACGAC 30 1.8618011E-6 46.0 37 CGCATAC 20 6.312099E-4 46.0 39 CGTTGAT 20 6.312099E-4 46.0 14 TAGCGAT 25 3.417678E-5 46.0 31 CACGCTA 20 6.312099E-4 46.0 27 TCTAGCG 25 3.417678E-5 46.0 31 CGAATCT 20 6.312099E-4 46.0 46 AACGACT 30 1.8618011E-6 46.0 38 CTCGCTA 40 5.6134013E-9 46.0 41 ACGCTAA 30 1.8618011E-6 46.0 10 ACGTAGG 20 6.312099E-4 46.0 40 ATACGGA 20 6.312099E-4 46.0 24 CGCGTAT 30 1.8618011E-6 46.0 34 TAATGCG 20 6.312099E-4 46.0 40 ATCGCGT 20 6.312099E-4 46.0 31 TATACGC 145 0.0 45.999996 19 ATACGCA 150 0.0 44.466663 20 AGGGTCG 155920 0.0 44.437855 1 >>END_MODULE