##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527640_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1531735 Sequences flagged as poor quality 0 Sequence length 52 %GC 60 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46451246462345 31.0 31.0 33.0 30.0 33.0 2 32.15050841039736 31.0 31.0 34.0 31.0 34.0 3 32.74822929553741 34.0 31.0 34.0 31.0 34.0 4 36.327008914727415 37.0 37.0 37.0 35.0 37.0 5 33.5231407521536 35.0 33.0 35.0 30.0 35.0 6 35.118102021563786 35.0 35.0 37.0 33.0 37.0 7 36.029079442592874 37.0 35.0 37.0 35.0 37.0 8 36.509827744355256 37.0 37.0 37.0 35.0 37.0 9 38.58931995416962 39.0 39.0 39.0 37.0 39.0 10 37.88519228195478 39.0 38.0 39.0 35.0 39.0 11 37.487981276134576 39.0 37.0 39.0 35.0 39.0 12 36.81254851524578 39.0 35.0 39.0 33.0 39.0 13 36.55229527300741 39.0 35.0 39.0 33.0 39.0 14 37.45547173629903 40.0 37.0 40.0 33.0 40.0 15 37.5040356197384 40.0 36.0 40.0 33.0 40.0 16 37.556166699853435 40.0 36.0 40.0 33.0 40.0 17 37.4489941145172 40.0 36.0 40.0 33.0 40.0 18 37.407202290213384 39.0 36.0 40.0 33.0 40.0 19 37.34459485485414 39.0 36.0 40.0 33.0 40.0 20 37.26984889683921 39.0 36.0 40.0 32.0 40.0 21 37.304923501780664 39.0 36.0 40.0 33.0 40.0 22 37.159066026434076 39.0 35.0 40.0 32.0 40.0 23 37.11819603260355 39.0 35.0 40.0 32.0 40.0 24 37.08181310735865 39.0 35.0 40.0 32.0 40.0 25 36.97144088239806 39.0 35.0 40.0 32.0 40.0 26 36.750667706881416 38.0 35.0 40.0 32.0 40.0 27 36.59418633118653 38.0 35.0 40.0 31.0 40.0 28 36.45058250937662 38.0 35.0 40.0 31.0 40.0 29 36.27996552928542 38.0 35.0 40.0 31.0 40.0 30 36.12401622996145 38.0 35.0 40.0 30.0 40.0 31 35.97246912814553 38.0 34.0 40.0 30.0 40.0 32 35.84095812918031 38.0 34.0 40.0 30.0 40.0 33 35.40952384061212 37.0 34.0 40.0 29.0 40.0 34 35.1381446529589 37.0 33.0 40.0 27.0 40.0 35 35.049957074820384 37.0 33.0 40.0 28.0 40.0 36 34.91587905218592 37.0 33.0 40.0 28.0 40.0 37 34.81969922995818 36.0 33.0 39.0 28.0 40.0 38 34.46099619059433 36.0 33.0 39.0 26.0 40.0 39 34.42869752274382 35.0 33.0 39.0 27.0 40.0 40 34.18803383091723 35.0 33.0 39.0 26.0 40.0 41 33.80777680212308 35.0 33.0 39.0 25.0 40.0 42 33.84087782808384 35.0 33.0 39.0 26.0 40.0 43 33.79274091145009 35.0 33.0 38.0 26.0 40.0 44 33.630383192915225 35.0 32.0 38.0 26.0 40.0 45 33.47395339272133 35.0 32.0 38.0 25.0 40.0 46 33.079690024710544 35.0 32.0 38.0 23.0 40.0 47 32.814414373243416 35.0 31.0 37.0 23.0 40.0 48 32.73992368131563 35.0 31.0 37.0 23.0 40.0 49 32.62630285264749 34.0 31.0 37.0 24.0 40.0 50 32.54274923534423 34.0 31.0 36.0 24.0 39.0 51 33.02472294489582 35.0 32.0 37.0 24.0 40.0 52 32.85722334476917 35.0 32.0 36.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 4.0 14 14.0 15 32.0 16 79.0 17 158.0 18 335.0 19 638.0 20 1160.0 21 2037.0 22 3353.0 23 4883.0 24 7296.0 25 9850.0 26 13587.0 27 18287.0 28 23407.0 29 30208.0 30 39253.0 31 50724.0 32 66762.0 33 96656.0 34 165583.0 35 177293.0 36 240753.0 37 274846.0 38 276917.0 39 27617.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.05531962121385 0.6562492859404532 0.2132222610307919 0.07520883181490272 8 99.08554678191723 0.6238677055757034 0.13729528932876772 0.15329022317829127 9 96.8375077934499 1.6314832526514051 0.7584862916888365 0.772522662209847 10 60.80627523690456 26.279545743878675 5.439583217723692 7.474595801493078 11 39.04369881213134 23.587631019725997 18.82270758323078 18.545962584911884 12 31.09761153202088 15.918680450600137 27.115591143376626 25.868116874002357 13 25.18843011356403 16.663848511655083 29.872921882701643 28.274799492079243 14 26.29201526373687 16.94503292018528 30.653148227336974 26.10980358874087 15 27.299761381701142 17.47116831566818 29.031914789438122 26.197155513192556 16 32.8054787544843 17.951995612818145 25.013138695662107 24.229386937035454 17 32.34482465961801 18.617646002735462 24.03346531873986 25.004064018906664 18 31.641635139237533 19.10134585943391 23.207604448550175 26.049414552778384 19 31.796753354855767 19.966312710749577 21.74201150982383 26.49492242457083 20 30.842606586648476 21.562933536153448 21.63729365719266 25.95716622000542 21 31.810136870933942 20.71944559600714 23.772388827049067 23.69802870600985 22 30.934202064978606 19.670373791811247 24.16834504663013 25.227079096580024 23 31.56786258719687 18.88022405964478 23.750322346881152 25.801591006277196 24 31.97792046274323 18.979719076733247 22.522564281680577 26.519796178842945 25 30.026603818545638 19.431494351176934 22.253457680342876 28.28844414993455 26 27.905349162877393 19.12850460425596 23.022911926671387 29.94323430619526 27 27.80330801346186 18.450319409036158 23.98241210130995 29.763960476192032 28 30.730837906034658 20.781205626299588 20.52404626126582 27.963910206399934 29 31.343411229749275 20.272893157106157 21.432036220364488 26.95165939278008 30 31.075545051852966 18.70943733739844 23.221510248182618 26.99350736256598 31 32.37054712466582 19.96122044609544 21.647804613722347 26.02042781551639 32 35.40142387553983 19.65705556117736 20.365141489879125 24.57637907340369 33 34.47548041926312 19.12837403336739 22.150502534707375 24.245643012662114 34 30.015178865795978 21.893277884229324 25.755695338945706 22.335847911028996 35 30.317776900051246 24.20542717898331 24.0469794057066 21.42981651525884 36 30.893529233189813 25.449702461587677 20.761881134791594 22.894887170430916 37 31.1783696265999 25.21088830639765 20.057190049192585 23.55355201780987 38 32.64468070521337 23.993053628728205 20.119407077595014 23.24285858846341 39 31.885280417304564 22.746428070129625 19.909318517889844 25.45897299467597 40 29.723875213401797 21.952752923971836 21.787646035378184 26.535725827248186 41 27.878516845276764 22.553052584161097 22.13685787685207 27.43157269371007 42 26.810903974904278 20.633203524108282 23.13859773394223 29.417294767045217 43 27.14888671996135 19.15794833962794 24.239832608120857 29.453332332289854 44 27.720134357444337 19.256333504163578 23.810841953732208 29.212690184659877 45 28.3537948796626 20.23013119110029 23.835585137115757 27.580488792121354 46 28.501862267298193 22.298112924232978 22.377369453593474 26.82265535487535 47 27.102142341854176 21.46043538862793 24.25732910718891 27.180093162328994 48 29.528737020437607 20.30808201157511 24.376997326561057 25.786183641426224 49 28.438992384452927 20.05849575807826 25.456949145903174 26.045562711565644 50 26.692737320750652 20.765406548782916 24.01544653611754 28.52640959434889 51 26.054702673765373 21.21770410678087 24.464283965568455 28.2633092538853 52 27.278021328754647 21.341942307252886 24.549612041247343 26.830424322745124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 3.5 8 7.0 9 29.5 10 52.0 11 53.0 12 54.0 13 407.0 14 1324.0 15 1888.0 16 2043.5 17 2199.0 18 2252.0 19 2305.0 20 2338.0 21 2371.0 22 2452.5 23 2534.0 24 2518.5 25 2503.0 26 2842.0 27 3181.0 28 3581.0 29 3981.0 30 4987.0 31 5993.0 32 6711.0 33 7429.0 34 8346.0 35 9263.0 36 10390.5 37 11518.0 38 13746.0 39 16065.0 40 16156.0 41 18262.0 42 20368.0 43 23754.0 44 27140.0 45 31251.0 46 35362.0 47 35813.0 48 36264.0 49 42943.0 50 49622.0 51 50850.0 52 52078.0 53 54507.0 54 56936.0 55 65749.0 56 74562.0 57 85844.0 58 97126.0 59 110320.0 60 123514.0 61 141447.5 62 159381.0 63 156985.0 64 157807.5 65 161026.0 66 138062.5 67 115099.0 68 101018.5 69 86938.0 70 73226.5 71 59515.0 72 52098.5 73 44682.0 74 38867.5 75 33053.0 76 31856.0 77 30659.0 78 22772.5 79 14886.0 80 10711.0 81 6536.0 82 4791.0 83 3046.0 84 1900.5 85 755.0 86 498.5 87 242.0 88 170.0 89 73.0 90 48.0 91 34.5 92 21.0 93 18.0 94 15.0 95 10.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1531735.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.354516217632522 #Duplication Level Percentage of deduplicated Percentage of total 1 71.04409267734283 7.356272097945342 2 9.798625155715989 2.0292004617072643 3 3.9366792985949473 1.222872289227588 4 1.9614388362960984 0.8123900096128887 5 1.082490206768575 0.5604331200706797 6 0.6684131868687451 0.4152657110107116 7 0.4625116161028911 0.3352358820846568 8 0.33261608717837243 0.27552629351471436 9 0.29733933044679284 0.27709244273261807 >10 4.95451530428036 14.63028061482011 >50 3.559485159256122 26.107575563641593 >100 1.7868460514625706 31.981853618475263 >500 0.08007550067992728 5.56629152399664 >1k 0.03164273817190675 5.655023205807483 >5k 0.002583080667094428 1.7109768456487002 >10k+ 6.45770166773607E-4 1.0637103197037487 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AGGGTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 15908 1.0385608476662085 No Hit AGGGTCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 7180 0.4687494899574665 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 6901 0.4505348510022948 No Hit AGGGTCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6184 0.40372518745083186 No Hit AGGGTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5323 0.34751441992250615 No Hit AGGGTCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4627 0.30207575070100245 No Hit AGGGTCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3885 0.25363395104244535 No Hit AGGGTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3851 0.2514142459367972 No Hit AGGGTCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3087 0.20153616650399708 No Hit AGGGTCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3076 0.20081802661687564 No Hit AGGGTCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 2540 0.16582502848077507 No Hit AGGGTCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2454 0.16021048027237086 No Hit AGGGTCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2422 0.15812134605529024 No Hit AGGGTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2372 0.15485707384110176 No Hit AGGGTCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2139 0.13964556532298342 No Hit AGGGTCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 2077 0.1355978677773897 No Hit AGGGTCGGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAAGAACCGACTGCTC 1971 0.1286776106833101 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACTGACTGCTCT 1939 0.12658847646622948 No Hit AGGGTCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1933 0.12619676380052686 No Hit AGGGTCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1904 0.12430348591629754 No Hit AGGGTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1899 0.12397705869487867 No Hit AGGGTCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1870 0.12208378081064936 No Hit AGGGTCGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1766 0.11529409460513732 No Hit AGGGTCGGGGGGCTGGTGAGATGGCTCAGCGGGGAAAAGCTCCGACTGCTCT 1749 0.11418424205231323 No Hit AGGGTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1645 0.10739455584680119 No Hit AGGGTCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 1583 0.10334685830120745 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002023848772796861 0.0 0.0 0.0 0.0 8 0.003590699435607334 0.0 0.0 0.0 0.0 9 0.004308839322728801 0.0 0.0 0.0 0.0 10 0.014558654075280645 0.0 0.0 0.0 0.0 11 0.024220899829278563 0.0 0.0 0.0 0.0 12 0.03159815503334454 0.0 0.0 0.0 0.0 13 0.03864898301599167 0.0 0.0 0.0 0.0 14 0.046548521774327806 0.0 0.0 0.0 0.0 15 0.05575376941833934 0.0 0.0 0.0 0.0 16 0.06633001139231003 0.0 0.0 0.0 0.0 17 0.0769715388105645 0.0 0.0 0.0 0.0 18 0.08728663900740011 0.0 0.0 0.0 0.0 19 0.1008660114184242 0.0 0.0 0.0 0.0 20 0.11150753883667867 0.0 0.0 0.0 0.0 21 0.12110449914639282 0.0 0.0 0.0 0.0 22 0.13030974679040436 0.0 0.0 0.0 0.0 23 0.14055956154295618 0.0 0.0 0.0 0.0 24 0.15120108896121065 0.0 0.0 0.0 0.0 25 0.16288718348800543 0.0 0.0 0.0 0.0 26 0.17392042357196252 0.0 0.0 0.0 0.0 27 0.18266867310598767 0.0 0.0 0.0 0.0 28 0.19370191318994473 0.0 0.0 0.0 0.0 29 0.20362530072107773 0.0 0.0 0.0 0.0 30 0.21224297936653533 0.0 0.0 0.0 0.0 31 0.22268865045193847 0.0 0.0 0.0 0.0 32 0.23372189053589557 0.0 0.0 0.0 0.0 33 0.24168671473851547 0.0 0.0 0.0 0.0 34 0.25271995482247256 0.0 0.0 0.0 0.0 35 0.26407962212784847 0.0 0.0 0.0 0.0 36 0.27478643499038674 0.0 0.0 0.0 0.0 37 0.2851015351872223 0.0 0.0 0.0 0.0 38 0.2935233574998286 0.0 0.0 0.0 0.0 39 0.3025980342552726 0.0 0.0 0.0 0.0 40 0.31323956167352707 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGAT 20 6.312116E-4 46.0 21 GTAATCG 20 6.312116E-4 46.0 35 AATTCGC 20 6.312116E-4 46.0 38 ATACGCA 105 0.0 46.0 20 TATACGC 105 0.0 46.0 19 ATCATAC 40 5.6134013E-9 46.0 38 TTACACG 20 6.312116E-4 46.0 41 ATCGCTA 50 1.6370905E-11 46.0 10 CGATAAC 25 3.417692E-5 46.0 36 GCGTAAC 20 6.312116E-4 46.0 9 TACGTAG 40 5.6134013E-9 46.0 16 TACGTAC 30 1.861812E-6 46.0 16 CCCGATA 20 6.312116E-4 46.0 33 AGGGTCG 157335 0.0 44.39781 1 GGGTCGG 157085 0.0 44.118538 2 GGTCGGG 152920 0.0 44.032696 3 GTCGGGG 94710 0.0 43.960087 4 TCGGGGG 40175 0.0 43.88749 5 TCGGGAT 10995 0.0 43.61528 5 GTCGGGA 40270 0.0 43.5555 4 >>END_MODULE