##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527638_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2928204 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.664742620391202 31.0 31.0 33.0 30.0 33.0 2 32.46081352255512 33.0 31.0 34.0 31.0 34.0 3 32.998494981907 34.0 31.0 34.0 31.0 34.0 4 33.230182391663966 35.0 33.0 35.0 30.0 35.0 5 34.88220287930759 35.0 35.0 35.0 33.0 37.0 6 35.847335431547805 37.0 35.0 37.0 35.0 37.0 7 35.88929186627708 35.0 35.0 37.0 35.0 37.0 8 36.452923361896914 37.0 37.0 37.0 35.0 37.0 9 38.67431128432309 39.0 39.0 39.0 38.0 39.0 10 38.05134785691161 39.0 38.0 39.0 37.0 39.0 11 37.76523425280479 39.0 38.0 39.0 35.0 39.0 12 37.40160555753629 39.0 37.0 39.0 35.0 39.0 13 37.28089948651119 39.0 37.0 39.0 34.0 39.0 14 38.08829200424561 40.0 38.0 40.0 34.0 40.0 15 38.138771410735046 40.0 38.0 40.0 34.0 40.0 16 38.16307846038049 40.0 38.0 40.0 34.0 40.0 17 38.11385784596975 40.0 38.0 40.0 34.0 40.0 18 38.06856387055 40.0 38.0 40.0 34.0 40.0 19 38.07975024964108 40.0 38.0 40.0 34.0 40.0 20 38.03841467329462 40.0 38.0 40.0 34.0 40.0 21 38.009632867108984 40.0 38.0 40.0 34.0 40.0 22 38.01108256118768 40.0 38.0 40.0 34.0 40.0 23 37.94361560874857 40.0 38.0 40.0 34.0 40.0 24 37.90736710966859 40.0 37.0 40.0 34.0 40.0 25 37.852910179755234 40.0 37.0 40.0 34.0 40.0 26 37.73076636737058 40.0 37.0 40.0 34.0 40.0 27 37.626636327250424 40.0 37.0 40.0 33.0 40.0 28 37.49832559480146 40.0 36.0 40.0 33.0 40.0 29 37.43932868065203 40.0 36.0 40.0 33.0 40.0 30 37.333687133819915 40.0 36.0 40.0 33.0 40.0 31 37.22157096978216 39.0 36.0 40.0 33.0 40.0 32 37.10995818597338 39.0 36.0 40.0 32.0 40.0 33 36.969370986447665 39.0 35.0 40.0 32.0 40.0 34 36.845498469368934 39.0 35.0 40.0 31.0 40.0 35 36.714133987932534 39.0 35.0 40.0 31.0 40.0 36 36.70390382637275 39.0 35.0 40.0 31.0 40.0 37 36.59878717466406 39.0 35.0 40.0 31.0 40.0 38 36.51453553099442 39.0 35.0 40.0 31.0 40.0 39 36.39146828567955 38.0 35.0 40.0 31.0 40.0 40 36.14197986205879 38.0 35.0 40.0 30.0 40.0 41 36.008958733749424 38.0 35.0 40.0 30.0 40.0 42 35.89992295618748 38.0 35.0 40.0 30.0 40.0 43 35.796046996725636 38.0 35.0 40.0 30.0 40.0 44 35.64519992459542 38.0 34.0 40.0 29.0 40.0 45 35.5455538616845 38.0 34.0 40.0 29.0 40.0 46 35.41216254058802 37.0 34.0 40.0 29.0 40.0 47 35.19646103891669 37.0 34.0 40.0 28.0 40.0 48 35.01791166189241 37.0 34.0 40.0 28.0 40.0 49 35.329089776531966 37.0 34.0 40.0 29.0 40.0 50 35.41024054335012 37.0 34.0 40.0 29.0 40.0 51 35.400323884538096 37.0 34.0 40.0 30.0 40.0 52 34.92786704751445 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 6.0 15 13.0 16 54.0 17 128.0 18 299.0 19 588.0 20 1131.0 21 1965.0 22 3265.0 23 5230.0 24 7732.0 25 11260.0 26 15616.0 27 21236.0 28 28589.0 29 37766.0 30 48693.0 31 62515.0 32 82059.0 33 113834.0 34 203841.0 35 214015.0 36 319552.0 37 504638.0 38 1035655.0 39 208521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.62133785760828 0.15285820250228468 0.19909815026548697 0.026705789623946964 8 99.4867502400789 0.28911920071142583 0.10976011234189967 0.11437044686777287 9 98.03565598571684 0.9345660343336735 0.458984415020265 0.5707935649292194 10 51.9090541505988 35.2444706721253 5.017205085438036 7.829270091837865 11 32.5581482710904 23.756780606815646 23.80479638713696 19.88027473495699 12 29.354785390635353 17.522413055920968 27.37001930193388 25.7527822515098 13 24.923775802505563 18.477367014046838 29.424725872924157 27.174131310523446 14 26.033466247570182 19.30640761367719 29.754211113706557 24.90591502504607 15 26.57075804827806 19.71481495141732 28.19557653770024 25.51885046260438 16 31.25878524856875 20.293941269119227 25.679495007861476 22.76777847445055 17 31.71903323675536 20.458103328866432 22.96513494278404 24.857728491594163 18 28.968166152358236 20.57086869630668 25.57151072807769 24.889454423257394 19 29.07242801389521 21.29100294924807 24.72706819606831 24.909500840788414 20 28.99466703822548 21.99187624905915 24.848507822542416 24.16494889017295 21 30.135707758066037 19.950932380394264 26.08216504041385 23.83119482112585 22 29.959661280429916 19.7190496290559 25.331261073340517 24.990028017173664 23 29.41338786505312 21.33714044513292 25.354722553483295 23.894749136330663 24 29.031925371319755 21.31149332491862 24.396114478362847 25.260466825398776 25 27.838156084753656 21.382492476617067 24.3245347660204 26.454816672608878 26 27.32996061749796 22.108364034746213 23.689913680877424 26.871761666878403 27 26.769992801048016 20.12322228915745 24.839492057247377 28.26729285254716 28 28.283480249326892 22.595932523826892 22.836523684825238 26.28406354202098 29 29.82350273409913 22.056181878038554 23.08701852739768 25.033296860464638 30 29.020006802804723 21.14077434495684 23.731645745993106 26.10757310624533 31 29.985001045009156 21.808384934929396 23.45379625190048 24.752817768160963 32 31.345254633898456 21.90540686372944 23.369785711651236 23.379552790720865 33 30.8765714410608 21.546415481981445 23.716243813614078 23.860769263343673 34 28.54316161032496 22.834884454771593 25.712928470830583 22.909025464072858 35 27.936100080458875 24.651458709843986 25.288231284432367 22.124209925264772 36 28.404475917661475 24.82887121252481 22.784512281248166 23.98214058856555 37 29.096845711569273 25.716138629685638 21.968961178934254 23.21805447981083 38 29.56088441925494 24.752817768160963 22.28615219431433 23.400145618269764 39 28.557675626424935 23.790521425419815 22.117653005050194 25.534149943105056 40 27.56659030586667 23.786628254042412 23.013355626862065 25.63342581322886 41 25.68140744292406 23.646678988212567 23.801210571394616 26.870702997468754 42 25.733111490866072 22.80732489949471 23.79198990234287 27.66757370729635 43 25.551259406789967 22.320097916675206 25.40010873559356 26.728533940941272 44 26.42035869085624 21.687457567847048 25.03220404042888 26.859979700867836 45 26.720850050064822 22.157062827589883 24.27166959679039 26.850417525554914 46 26.437468154541143 23.368419686606533 23.531625528822445 26.662486630029875 47 25.77446789909446 23.154363562101548 25.216310065828747 25.854858472975245 48 27.667061447904583 22.355102308445723 24.52841400394235 25.449422239707342 49 26.99419166150992 22.809715443322936 24.755993776389897 25.440099118777244 50 25.471654297309886 23.4544109631706 25.158254001428865 25.91568073809065 51 25.16972861180437 24.130729962803137 24.4766416547481 26.222899770644393 52 25.841232373154327 24.008743926311148 24.642613697679533 25.50741000285499 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 22.5 6 45.0 7 27.5 8 10.0 9 35.5 10 61.0 11 852.0 12 1643.0 13 3611.0 14 6906.0 15 8233.0 16 7341.0 17 6449.0 18 5895.5 19 5342.0 20 6178.0 21 7014.0 22 6675.5 23 6337.0 24 6994.0 25 7651.0 26 10159.5 27 12668.0 28 13647.5 29 14627.0 30 19242.5 31 23858.0 32 24363.5 33 24869.0 34 29448.0 35 34027.0 36 39586.0 37 45145.0 38 50239.5 39 62659.0 40 69984.0 41 71210.0 42 72436.0 43 78082.0 44 83728.0 45 94210.5 46 104693.0 47 109852.5 48 115012.0 49 125937.0 50 136862.0 51 141839.5 52 146817.0 53 157776.5 54 168736.0 55 183181.5 56 197627.0 57 210324.5 58 223022.0 59 243250.5 60 263479.0 61 257072.5 62 250666.0 63 244517.0 64 208279.0 65 178190.0 66 158639.5 67 139089.0 68 117340.5 69 95592.0 70 80454.5 71 65317.0 72 55451.0 73 45585.0 74 43297.5 75 41010.0 76 30568.0 77 20126.0 78 14039.0 79 7952.0 80 5705.0 81 3458.0 82 2242.5 83 1027.0 84 695.0 85 363.0 86 250.0 87 137.0 88 77.5 89 16.0 90 14.0 91 8.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2928204.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.885546558880353 #Duplication Level Percentage of deduplicated Percentage of total 1 67.93627671728017 5.35714673091092 2 9.59145752998917 1.512677698405063 3 4.279205497142899 1.0123162254821125 4 2.163361810295554 0.6823716111515711 5 1.1638140120223222 0.45886547888396806 6 0.7428011846054755 0.3514435995118774 7 0.4888634431701434 0.2698468809436908 8 0.3957850177690593 0.2496784947940164 9 0.2797563460920745 0.19854285230261692 >10 5.450124060397152 12.34553413192357 >50 4.599881899493438 26.14689618572533 >100 2.769360784714273 38.180646064264714 >500 0.0999410000420242 5.2644372519359335 >1k 0.03634218183346335 5.795834681985925 >5k 0.0021632251091347225 1.2600219108908797 >10k+ 8.652900436538892E-4 0.9137402008878354 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 16466 0.5623242096520598 No Hit GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 10317 0.352332009655065 No Hit GGGTTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9673 0.330339006435344 No Hit GGGTTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8881 0.30329171055022125 No Hit GGGTTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6647 0.2269992118035492 No Hit GGGTTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 6180 0.2110508694066397 No Hit GGGTTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5552 0.18960427620479994 No Hit GGGTTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4911 0.16771372486343164 No Hit GGGTTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 4814 0.16440111413002645 No Hit GGGTTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 4784 0.1633765953464991 No Hit GGGTTTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGA 4756 0.16242037781520688 No Hit GGGTTTGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 3988 0.136192696956906 No Hit GGGTTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3960 0.1352364794256138 No Hit GGGTTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3762 0.1284746554543331 No Hit GGGTTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 3696 0.12622071413057287 No Hit GGGTTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3628 0.12389847155457748 No Hit GGGTTTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 3606 0.12314715777999073 No Hit GGGTTTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 3394 0.11590722504306394 No Hit GGGTTTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3358 0.11467780250283108 No Hit GGGTTTGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 3338 0.1139947899804795 No Hit GGGTTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 3238 0.11057972736872158 No Hit GGGTTTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 3097 0.1057644890861429 No Hit GGGTTTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2992 0.1021786733437971 No Hit GGGTTTGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 2945 0.10057359391627085 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0014001756708207488 0.0 0.0 0.0 0.0 8 0.003859020751286454 0.0 0.0 0.0 0.0 9 0.007239932736926799 0.0 0.0 0.0 0.0 10 0.047298617172847245 0.0 0.0 0.0 0.0 11 0.07017953667162534 0.0 0.0 0.0 0.0 12 0.08465940214547893 0.0 0.0 0.0 0.0 13 0.09490458998075271 0.0 0.0 0.0 0.0 14 0.10818918354049104 0.0 0.0 0.0 0.0 15 0.1222250908748161 0.0 0.0 0.0 0.0 16 0.13892474704631236 0.0 0.0 0.0 0.0 17 0.1531655581373429 0.0 0.0 0.0 0.0 18 0.16576713917472963 0.0 0.0 0.0 0.0 19 0.18041775777917113 0.0 0.0 0.0 0.0 20 0.1939414057217325 0.0 0.0 0.0 0.0 21 0.20531356421888639 0.0 0.0 0.0 0.0 22 0.21620761395039417 0.0 0.0 0.0 0.0 23 0.23089238318095323 0.0 0.0 0.0 0.0 24 0.24571375491598263 0.0 0.0 0.0 0.0 25 0.25838363720560453 0.0 0.0 0.0 0.0 26 0.2737172683323976 0.0 0.0 0.0 0.0 27 0.28577243935190305 0.0 0.0 0.0 0.0 28 0.30561395312621664 0.0 0.0 0.0 0.0 29 0.31739591913678145 0.0 0.0 0.0 0.0 30 0.33419802718663044 0.0 0.0 0.0 0.0 31 0.34666300571954684 0.0 0.0 0.0 0.0 32 0.36329436063880793 0.0 0.0 0.0 0.0 33 0.37497387477102007 0.0 0.0 0.0 0.0 34 0.388531673339699 0.0 0.0 0.0 0.0 35 0.4098075134109509 0.0 0.0 0.0 0.0 36 0.4242532282586869 0.0 0.0 0.0 0.0 37 0.43996251627277333 0.0 0.0 0.0 0.0 38 0.45283730231910074 0.0 0.0 0.0 0.0 39 0.4655413352348402 0.0 0.0 0.0 0.0 40 0.4787917781684609 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 20 6.313062E-4 46.0 33 TAACGAA 20 6.313062E-4 46.0 41 AATTCGG 20 6.313062E-4 46.0 27 GTTTGGG 298265 0.0 44.002014 3 TTGGGAT 32540 0.0 43.999695 5 GGTTTGG 303740 0.0 43.988808 2 TTTGGGG 156655 0.0 43.869648 4 GGGTTTG 306290 0.0 43.80355 1 TTTGGGA 106045 0.0 43.76387 4 GTAACGA 90 0.0 43.444447 22 TTGGGGC 35065 0.0 43.27135 5 TTGGGGG 52075 0.0 43.17331 5 TTGGGAC 20125 0.0 43.06286 5 TGGGATC 9325 0.0 42.86756 6 TTGGGGT 27995 0.0 42.721916 5 TTGGGAG 36805 0.0 42.61296 5 TTTGGGC 23395 0.0 42.539433 4 TTGGGGA 45045 0.0 42.420692 5 TGGGGGG 22030 0.0 42.27281 6 TGGGATT 11560 0.0 42.259518 6 >>END_MODULE