##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527637_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2949277 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.643123382442543 31.0 31.0 33.0 30.0 33.0 2 32.431872964119684 33.0 31.0 34.0 31.0 34.0 3 32.98548389995243 34.0 31.0 34.0 31.0 34.0 4 33.18745000893439 35.0 33.0 35.0 30.0 35.0 5 34.87750048571226 35.0 35.0 35.0 33.0 37.0 6 35.79157230738245 37.0 35.0 37.0 35.0 37.0 7 35.82600617032581 35.0 35.0 37.0 35.0 37.0 8 36.41154187958608 37.0 35.0 37.0 35.0 37.0 9 38.625834399413826 39.0 39.0 39.0 38.0 39.0 10 37.96098467522718 39.0 38.0 39.0 35.0 39.0 11 37.73225641402961 39.0 38.0 39.0 35.0 39.0 12 37.352796973631165 39.0 37.0 39.0 35.0 39.0 13 37.079882289795094 39.0 37.0 39.0 34.0 39.0 14 38.02799364047527 40.0 38.0 40.0 34.0 40.0 15 38.09578313600248 40.0 38.0 40.0 34.0 40.0 16 38.14683802165751 40.0 38.0 40.0 34.0 40.0 17 38.136640946238686 40.0 38.0 40.0 34.0 40.0 18 38.100613811452774 40.0 38.0 40.0 34.0 40.0 19 38.063055792996046 40.0 38.0 40.0 34.0 40.0 20 38.03619666786131 40.0 38.0 40.0 34.0 40.0 21 38.06588190936287 40.0 38.0 40.0 34.0 40.0 22 37.95802225426774 40.0 38.0 40.0 34.0 40.0 23 37.91666805118678 40.0 38.0 40.0 34.0 40.0 24 37.93069080998495 40.0 37.0 40.0 34.0 40.0 25 37.847001824514955 40.0 37.0 40.0 34.0 40.0 26 37.673539311499056 40.0 37.0 40.0 34.0 40.0 27 37.572718669694304 40.0 37.0 40.0 33.0 40.0 28 37.464452813350526 40.0 36.0 40.0 33.0 40.0 29 37.40551599595426 40.0 36.0 40.0 33.0 40.0 30 37.293946618103355 40.0 36.0 40.0 33.0 40.0 31 37.19947261650906 39.0 36.0 40.0 32.0 40.0 32 37.094832733581825 39.0 36.0 40.0 32.0 40.0 33 36.80029987010376 39.0 35.0 40.0 31.0 40.0 34 36.76746334779676 39.0 35.0 40.0 31.0 40.0 35 36.703175049342605 39.0 35.0 40.0 31.0 40.0 36 36.554140218094126 39.0 35.0 40.0 31.0 40.0 37 36.527162419806615 39.0 35.0 40.0 31.0 40.0 38 36.16483734827214 38.0 35.0 40.0 30.0 40.0 39 36.220798521129076 38.0 35.0 40.0 30.0 40.0 40 36.047211570835834 38.0 35.0 40.0 30.0 40.0 41 35.72596639786632 38.0 35.0 40.0 29.0 40.0 42 35.75296793078439 38.0 35.0 40.0 29.0 40.0 43 35.76259469693759 38.0 34.0 40.0 30.0 40.0 44 35.61748218292144 38.0 34.0 40.0 29.0 40.0 45 35.5130572679338 38.0 34.0 40.0 29.0 40.0 46 35.2037655330442 37.0 34.0 40.0 28.0 40.0 47 34.90649911825847 37.0 34.0 40.0 27.0 40.0 48 34.893572899391955 37.0 33.0 40.0 27.0 40.0 49 34.810691908559285 36.0 33.0 40.0 27.0 40.0 50 34.66352906152932 36.0 33.0 40.0 27.0 40.0 51 34.99496656299154 36.0 34.0 40.0 28.0 40.0 52 34.73171255192374 36.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 7.0 15 15.0 16 52.0 17 128.0 18 311.0 19 641.0 20 1186.0 21 1985.0 22 3436.0 23 5399.0 24 8183.0 25 11668.0 26 16279.0 27 22333.0 28 30011.0 29 39757.0 30 51256.0 31 65066.0 32 87266.0 33 121278.0 34 210026.0 35 223137.0 36 338773.0 37 536864.0 38 999062.0 39 175155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.6112945647357 0.15763185350172262 0.20303281109234567 0.02804077067023545 8 99.48970544306283 0.2922072087498055 0.10843335502226478 0.10965399316510453 9 97.99611904883807 0.9396540236810582 0.4789648446042878 0.585262082876583 10 51.85026703154705 35.231312623398885 5.069344113828576 7.849076231225484 11 32.629759768241506 23.799731256168887 23.73778387041977 19.832725105169843 12 29.366824479355447 17.574069848305196 27.313880656174376 25.74522501616498 13 25.195395346045828 18.446995653511014 29.324814183272714 27.032794817170448 14 26.023293166426892 19.294728843713223 29.80689843646426 24.87507955339563 15 26.565154782002505 19.733751695754588 28.21396566005838 25.48712786218453 16 31.276682386903637 20.288565638290336 25.69351742816968 22.741234546636345 17 31.73425215739315 20.479019095188413 22.925076213594043 24.86165253382439 18 29.002972592943966 20.559920278766626 25.572097839572205 24.865009288717204 19 29.043185838427522 21.28318228501426 24.736231964647608 24.937399911910614 20 29.014670375146178 21.970571092508433 24.85070069715391 24.16405783519147 21 30.108769030511546 19.893553572621357 26.1497987472862 23.8478786495809 22 30.13175771553503 19.71913794465559 25.232692622632598 24.916411717176786 23 29.347870681526356 21.31227416075194 25.497774539319295 23.84208061840241 24 29.040235962915656 21.291523312323665 24.409948607743527 25.258292117017156 25 27.897786474447805 21.35835325064414 24.356579595609364 26.38728067929869 26 27.39105211209391 22.088159233602 23.6961465471029 26.824642107201193 27 26.783547289725583 20.157550477625534 24.84944615239599 28.209456080252888 28 28.291069302747758 22.605099487094634 22.898052641376175 26.205778568781433 29 29.867930343606247 22.028076711682218 23.096135086667 25.00785785804453 30 29.03562466326493 21.08913472691782 23.76409540372098 26.111145206096275 31 29.927877239065708 21.79656234392361 23.54631321506932 24.729247201941355 32 31.264679445165715 21.92072836834248 23.488909315740774 23.325682870751034 33 30.864072788008723 21.527072567276658 23.78406640000244 23.824788244712177 34 28.546521740752056 22.81172639938534 25.744784230168953 22.896967629693652 35 27.9671594088992 24.654720461997975 25.280297510203347 22.097822618899478 36 28.561406744771684 24.797026525484043 22.768597185005003 23.87296954473927 37 29.058748974748728 25.708911031415493 22.055134190515165 23.17720580332061 38 29.53913789718633 24.772918922162958 22.230770456623773 23.45717272402694 39 28.504138471903453 23.800104228934753 22.186759670251387 25.508997628910407 40 27.534544907107744 23.8247543380971 23.02015036227523 25.62055039251993 41 25.978027835296587 23.54872058473992 23.793763691915 26.67948788804849 42 25.717998004256636 22.776327893242986 23.83024720973988 27.675426892760495 43 25.52629000260064 22.31930062859474 25.373574608285352 26.780834760519273 44 26.400233006258823 21.71142283346054 25.05129223196058 26.83705192832006 45 26.714479514809902 22.11419951398258 24.332539805518437 26.838781165689085 46 26.578242735422954 23.354164427417295 23.505387930669112 26.562204906490646 47 25.978638154368 23.183376807264967 25.127819462193617 25.710165576173416 48 27.631619546078586 22.346731080193553 24.548219784035204 25.47342958969266 49 26.999464614547904 22.876081154805057 24.681676220985686 25.44277800966135 50 25.540361247858375 23.3976666145635 25.134499065364157 25.92747307221397 51 25.209093618537697 24.099567453311437 24.4713195810363 26.220019347114565 52 25.87942739864719 23.948072697138993 24.633427107728437 25.539072796485375 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 16.0 6 32.0 7 21.0 8 10.0 9 41.0 10 72.0 11 853.0 12 1634.0 13 3518.0 14 6786.5 15 8171.0 16 7433.0 17 6695.0 18 6077.0 19 5459.0 20 6213.0 21 6967.0 22 6691.5 23 6416.0 24 7054.0 25 7692.0 26 10112.5 27 12533.0 28 13619.0 29 14705.0 30 19144.0 31 23583.0 32 24365.5 33 25148.0 34 29513.5 35 33879.0 36 39870.5 37 45862.0 38 50970.5 39 63352.5 40 70626.0 41 71975.5 42 73325.0 43 78850.5 44 84376.0 45 94620.5 46 104865.0 47 110700.0 48 116535.0 49 126977.0 50 137419.0 51 142505.0 52 147591.0 53 158967.5 54 170344.0 55 184967.0 56 199590.0 57 212403.5 58 225217.0 59 245365.5 60 265514.0 61 259566.0 62 253618.0 63 246418.0 64 209451.5 65 179685.0 66 159589.5 67 139494.0 68 117405.5 69 95317.0 70 80648.5 71 65980.0 72 55971.0 73 45962.0 74 43330.5 75 40699.0 76 30561.5 77 20424.0 78 14218.0 79 8012.0 80 5767.0 81 3522.0 82 2292.0 83 1062.0 84 703.0 85 344.0 86 239.5 87 135.0 88 84.5 89 26.5 90 19.0 91 14.0 92 9.0 93 5.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2949277.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.168942911769046 #Duplication Level Percentage of deduplicated Percentage of total 1 67.2889659207305 5.496797211984203 2 9.960213336480503 1.6272882826949984 3 4.344187620241372 1.0646226200329678 4 2.232014854865105 0.7293280771045405 5 1.2352639681223927 0.5045400418278562 6 0.7644473917649681 0.3746836261427263 7 0.4948834362684033 0.2829872177199677 8 0.4007697359916723 0.26190920752645785 9 0.30705043043349844 0.22574496935208252 >10 5.710318489211021 13.448313202274514 >50 4.535033370448127 26.416403694900346 >100 2.596296795963893 36.824811118493436 >500 0.09182343679992981 4.923573792642198 >1k 0.03568493752414334 5.666457599952369 >5k 0.002611092989571464 1.601339957902409 >10k+ 4.3518216492857735E-4 0.5511993794489255 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGTTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 15505 0.5257220667980661 No Hit GGGTTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 9957 0.3376081663404285 No Hit GGGTTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 9344 0.3168234112970738 No Hit GGGTTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8438 0.2861040180356067 No Hit GGGTTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6236 0.21144165163190842 No Hit GGGTTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5824 0.19747212621940902 No Hit GGGTTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5246 0.1778741027038152 No Hit GGGTTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4624 0.15678418812475056 No Hit GGGTTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 4615 0.15647902858904064 No Hit GGGTTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 4541 0.15396993907320336 No Hit GGGTTTGGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGA 4468 0.15149475617244498 No Hit GGGTTTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3843 0.1303031217481437 No Hit GGGTTTGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 3759 0.1274549660815176 No Hit GGGTTTGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 3549 0.12033457691495238 No Hit GGGTTTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 3483 0.11809674031974615 No Hit GGGTTTGGGAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGT 3396 0.11514686480788341 No Hit GGGTTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3316 0.11243433560157287 No Hit GGGTTTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 3287 0.11145104376428527 No Hit GGGTTTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3236 0.1097218063952623 No Hit GGGTTTGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 3177 0.10772131610560826 No Hit GGGTTTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2980 0.10104171293506849 No Hit GGGTTTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2966 0.10056702032396414 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0018987704444173945 0.0 0.0 0.0 0.0 8 0.004814739341201251 0.0 0.0 0.0 0.0 9 0.008578373614957157 0.0 0.0 0.0 0.0 10 0.045977370046964054 0.0 0.0 0.0 0.0 11 0.07103435859025789 0.0 0.0 0.0 0.0 12 0.08469872446704735 0.0 0.0 0.0 0.0 13 0.09436210976452873 0.0 0.0 0.0 0.0 14 0.1061277051969008 0.0 0.0 0.0 0.0 15 0.11908003215703374 0.0 0.0 0.0 0.0 16 0.13542302062505487 0.0 0.0 0.0 0.0 17 0.14959598572802757 0.0 0.0 0.0 0.0 18 0.16268393914847604 0.0 0.0 0.0 0.0 19 0.17672127779113322 0.0 0.0 0.0 0.0 20 0.18977532459650281 0.0 0.0 0.0 0.0 21 0.20089669434237611 0.0 0.0 0.0 0.0 22 0.2128318228501426 0.0 0.0 0.0 0.0 23 0.2261910291912221 0.0 0.0 0.0 0.0 24 0.24239839119892773 0.0 0.0 0.0 0.0 25 0.2539944535559054 0.0 0.0 0.0 0.0 26 0.2704730684842421 0.0 0.0 0.0 0.0 27 0.28376446159516383 0.0 3.390661507888204E-5 0.0 0.0 28 0.3043796835631241 0.0 3.390661507888204E-5 0.0 0.0 29 0.316484345146285 0.0 3.390661507888204E-5 0.0 0.0 30 0.33174232193178194 0.0 3.390661507888204E-5 0.0 0.0 31 0.34540668780857137 0.0 3.390661507888204E-5 0.0 0.0 32 0.35968137275678075 0.0 3.390661507888204E-5 0.0 0.0 33 0.3716504078796261 0.0 3.390661507888204E-5 0.0 0.0 34 0.38433148191912797 0.0 3.390661507888204E-5 0.0 0.0 35 0.40345481282361745 0.0 3.390661507888204E-5 0.0 0.0 36 0.41664448608930255 0.0 3.390661507888204E-5 0.0 0.0 37 0.4314277702636951 0.0 3.390661507888204E-5 0.0 0.0 38 0.44309164585083055 0.0 3.390661507888204E-5 0.0 0.0 39 0.45485724128320265 0.0 3.390661507888204E-5 0.0 0.0 40 0.4667584631758902 0.0 3.390661507888204E-5 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAATA 40 5.6170393E-9 46.0 13 TTGGGAT 32670 0.0 44.120293 5 GTTTGGG 300060 0.0 43.9718 3 GGTTTGG 306165 0.0 43.94764 2 TTTGGGA 107130 0.0 43.89601 4 TTTGGGG 156350 0.0 43.77576 4 GGGTTTG 308940 0.0 43.737522 1 TTGGGGC 35665 0.0 43.214077 5 TTGGGGG 52810 0.0 43.151676 5 TTGGGAC 19830 0.0 43.135147 5 TTGGGGT 27540 0.0 42.90995 5 TGGGATC 9970 0.0 42.885654 6 TTGGGAG 37270 0.0 42.636703 5 TGGGATT 11005 0.0 42.59337 6 TTGGGGA 43605 0.0 42.25502 5 TTTGGGC 23865 0.0 42.154617 4 TGGGGGG 22940 0.0 42.099827 6 TGGGACT 7595 0.0 41.851215 6 TGGGGCT 19430 0.0 41.51364 6 TGGGATG 8960 0.0 41.405136 6 >>END_MODULE