##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527636_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 318390 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.514391155501116 33.0 31.0 34.0 31.0 34.0 2 32.28175508024749 33.0 31.0 34.0 31.0 34.0 3 32.79224221866264 34.0 31.0 34.0 31.0 34.0 4 36.21462985646534 37.0 37.0 37.0 35.0 37.0 5 36.31968654794434 37.0 37.0 37.0 35.0 37.0 6 36.38950343917837 37.0 37.0 37.0 35.0 37.0 7 36.59278557743648 37.0 37.0 37.0 35.0 37.0 8 36.698219165174784 37.0 37.0 37.0 35.0 37.0 9 38.640968623386414 39.0 39.0 39.0 39.0 39.0 10 38.22156474763655 39.0 39.0 39.0 37.0 39.0 11 37.982430352712086 39.0 38.0 39.0 35.0 39.0 12 37.76420427777254 39.0 37.0 39.0 35.0 39.0 13 37.688498382486884 39.0 38.0 39.0 35.0 39.0 14 38.55175413800685 40.0 38.0 40.0 35.0 40.0 15 38.52376330914915 40.0 38.0 40.0 35.0 40.0 16 38.544536574641164 40.0 38.0 40.0 35.0 40.0 17 38.567015295706526 40.0 38.0 40.0 35.0 40.0 18 38.426687395960926 40.0 38.0 40.0 35.0 40.0 19 38.40785200540218 40.0 38.0 40.0 35.0 40.0 20 38.338449700053395 40.0 38.0 40.0 35.0 40.0 21 38.40120606802977 40.0 38.0 40.0 35.0 40.0 22 38.38170796821508 40.0 38.0 40.0 35.0 40.0 23 38.294670058733 40.0 38.0 40.0 35.0 40.0 24 38.14748264706806 40.0 38.0 40.0 35.0 40.0 25 37.99266936775653 40.0 38.0 40.0 34.0 40.0 26 37.959232387951886 40.0 38.0 40.0 34.0 40.0 27 37.92064449260341 40.0 38.0 40.0 34.0 40.0 28 37.813844655925124 40.0 38.0 40.0 34.0 40.0 29 37.83400860579792 40.0 38.0 40.0 34.0 40.0 30 37.94402462388894 40.0 38.0 40.0 34.0 40.0 31 37.97558654480354 40.0 38.0 40.0 34.0 40.0 32 37.91885423537171 40.0 38.0 40.0 34.0 40.0 33 37.8474795062659 40.0 38.0 40.0 34.0 40.0 34 37.610201325418515 40.0 37.0 40.0 33.0 40.0 35 37.61425296020604 40.0 37.0 40.0 33.0 40.0 36 37.24765853198907 40.0 36.0 40.0 33.0 40.0 37 37.29901692892365 40.0 36.0 40.0 33.0 40.0 38 37.21762932252897 40.0 36.0 40.0 33.0 40.0 39 37.0729733974057 40.0 36.0 40.0 33.0 40.0 40 36.86985458085995 40.0 35.0 40.0 32.0 40.0 41 36.74910016018091 40.0 35.0 40.0 32.0 40.0 42 36.58468230786143 40.0 35.0 40.0 31.0 40.0 43 36.40226765916015 39.0 35.0 40.0 31.0 40.0 44 35.892283049090736 39.0 35.0 40.0 29.0 40.0 45 35.82322309117749 39.0 35.0 40.0 28.0 40.0 46 35.5195452118471 39.0 35.0 40.0 27.0 40.0 47 35.37151920600521 39.0 35.0 40.0 26.0 40.0 48 35.30522315399353 38.0 35.0 40.0 27.0 40.0 49 35.18981123779013 38.0 35.0 40.0 26.0 40.0 50 34.65365432331417 37.0 34.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 2.0 15 5.0 16 12.0 17 20.0 18 22.0 19 55.0 20 99.0 21 176.0 22 286.0 23 480.0 24 814.0 25 1047.0 26 1518.0 27 2174.0 28 2916.0 29 3575.0 30 4420.0 31 5242.0 32 6932.0 33 9509.0 34 15038.0 35 19282.0 36 26531.0 37 41108.0 38 106885.0 39 70241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.52385439241182 0.34768679920851786 0.06846948710700713 0.05998932127265304 8 98.87810546813655 0.9447532899902635 0.07569333207701247 0.10144790979616194 9 91.64420993121644 6.1876943371337045 1.0198184616351016 1.1482772700147617 10 40.389459467948114 40.681868149125286 9.693457709098904 9.235214673827695 11 31.725870787399103 23.724049122145797 26.311127862055965 18.238952228399132 12 27.221018248060552 23.077357957222276 25.69333207701247 24.0082917177047 13 27.483589308709444 20.957002418417662 27.255567071830143 24.303841201042747 14 25.365746411633534 24.229404189830085 25.94428216966613 24.460567228870254 15 25.388988347623982 23.506391532397373 29.84641477433336 21.25820534564528 16 27.48296114827727 27.14312635447093 23.495084644618235 21.878827852633563 17 30.58984264581174 23.116617984233173 24.194541285844405 22.098998084110683 18 23.964948647884672 24.290963912183173 28.12525519017557 23.61883224975659 19 26.025314865416625 27.02032098998084 25.372970256603537 21.581393887998995 20 23.93919407016552 26.33436979804642 27.178617418888784 22.547818712899275 21 29.997801438487386 23.19419579760671 26.400326643424734 20.40767612048117 22 25.16316467225729 24.675398096673888 23.715254876095354 26.44618235497346 23 23.621658971701372 27.098841044002636 25.114796318979867 24.16470366531612 24 26.44869499670216 27.42045918527592 23.146455604761456 22.98439021326047 25 24.47124595621722 26.969439994974714 26.290084487578124 22.26922956122994 26 25.83749489619649 26.41508841358083 23.60972392349006 24.137692766732624 27 22.319482395803888 27.91262288388454 26.166965042871947 23.60092967743962 28 23.526178586010868 27.1022959263796 26.97038223562298 22.401143251986557 29 26.157542636389337 24.915983542196678 23.56606677345394 25.36040704796005 30 24.699582273312604 25.575237915763687 28.101385093752945 21.623794717170767 31 28.909199409529197 26.74204591852759 22.041521404566726 22.30723326737649 32 24.984138949087598 27.911366563020195 24.08995257388737 23.014541914004838 33 26.143094946449324 26.068029774804486 27.194635509909233 20.59423976883696 34 22.148308678036372 26.584063569835735 29.672100254404977 21.59552749772292 35 27.796413203932286 27.566192405540374 24.323942334872324 20.313452055655016 36 25.40029523540312 29.393511102735637 23.930085743898992 21.276107917962246 37 24.209931216432675 31.66776594742297 22.67816200257546 21.44414083356889 38 23.879518829108953 31.759791450736518 23.133578315901882 21.227111404252646 39 22.76736078394422 30.057790759760046 25.257388737083453 21.91745971921229 40 23.760168346995822 30.434058858632497 24.694242909639122 21.111529884732562 41 22.336756807688683 30.601777694023053 25.5896856057037 21.471779892584568 42 22.14956499890072 30.628474512390465 23.957724802914665 23.26423568579415 43 23.360972392349005 28.915795094067025 25.185150287383394 22.53808222620057 44 23.39834793806338 30.48022865039731 23.7190238386884 22.402399572850907 45 22.807877131819467 30.36967241433462 23.991331386035995 22.83111906780992 46 24.03090549326298 27.508401645780335 24.27745846289142 24.183234398065263 47 22.72715851628506 27.917962247558027 25.23634536260561 24.118533873551304 48 22.98187757153177 27.861113728446245 25.239486164766483 23.917522535255504 49 23.079242438518797 28.875592826407864 25.71343321084205 22.331731524231287 50 23.96023744464336 29.776374886145923 24.085555450862152 22.177832218348566 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 9.0 6 18.0 7 29.5 8 41.0 9 82.5 10 124.0 11 922.0 12 1720.0 13 1940.5 14 2161.0 15 2354.0 16 2547.0 17 1979.0 18 1411.0 19 1404.5 20 1398.0 21 1472.5 22 1547.0 23 1323.5 24 1100.0 25 1762.5 26 2425.0 27 2564.0 28 2703.0 29 3330.0 30 3957.0 31 4327.0 32 4697.0 33 5701.5 34 6706.0 35 7093.0 36 7480.0 37 9771.5 38 12063.0 39 12072.0 40 12081.0 41 12170.0 42 12259.0 43 13706.5 44 15154.0 45 15145.0 46 15136.0 47 16801.5 48 18467.0 49 18949.0 50 19431.0 51 18893.5 52 18356.0 53 20449.0 54 22542.0 55 21722.0 56 20902.0 57 21109.5 58 21317.0 59 21526.0 60 21735.0 61 21102.0 62 20469.0 63 18428.5 64 16388.0 65 13776.0 66 11164.0 67 9939.0 68 8714.0 69 6546.5 70 4379.0 71 3778.5 72 3178.0 73 2785.5 74 2393.0 75 1949.5 76 1506.0 77 950.5 78 395.0 79 281.5 80 168.0 81 134.5 82 101.0 83 73.5 84 46.0 85 26.5 86 7.0 87 4.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 318390.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.04312321366877 #Duplication Level Percentage of deduplicated Percentage of total 1 72.39212097861683 9.442193536229153 2 8.664033904835291 2.2601212349634094 3 3.3880755153149678 1.3257325921040235 4 1.632633403968407 0.8517855460284557 5 0.8813330764785205 0.5747667954395552 6 0.5971874397996533 0.46735136153773676 7 0.49845887112309767 0.4551022331103364 8 0.34916201117318435 0.36433305066113886 9 0.31785783086110575 0.3731272967115801 >10 7.055480639568485 25.73133578315902 >50 2.834232325178193 25.45274663148968 >100 1.3557118089000193 28.537328433681964 >500 0.02167212483143903 1.743145199283897 >1k 0.01204006935079946 2.42093030560005 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAA 2493 0.7830019787053614 Illumina Single End Adapter 2 (100% over 34bp) GAGATCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1591 0.49970162379471716 No Hit GAGATCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGAGATCGGGA 1382 0.4340588586324947 No Hit GAGATCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1159 0.36401897044505166 No Hit GAGATCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1083 0.34014887402242533 No Hit GAGATCGGGGTGGTTATCCAGTCTGTGTGCCAAAGTCAGCCATATCTCCC 708 0.22236879298972956 No Hit GAGATCGGGATCTTGGATCCTTTTGAAAAGTTAAGAATATATGAAGGTAA 703 0.22079839190929365 No Hit GAGATCGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAG 675 0.21200414585885236 No Hit GAGATCGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTC 647 0.20320989980841106 No Hit GAGATCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 593 0.1862495681397029 No Hit GAGATCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 585 0.18373692641100536 No Hit GAGATCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 563 0.1768271616570872 No Hit GAGATCGGAGATGGAGAAGACACCATACTGAAGCTAAAAGTGATACCTGA 539 0.1692892364709947 No Hit GAGATCGGGGCTGGAAGCAGAGACTCCTGTGCGTCTCTCTCACGCTACCC 537 0.16866107603882033 No Hit GAGATCGGGGACTTCAAGTAGCCAAGCCGGCTTCGAGAGTCGTATCTATT 477 0.149816263073589 No Hit GAGATCGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 431 0.13536857313357833 Illumina Single End Adapter 2 (97% over 34bp) GAGATCGGGGAGGGGGAGGTGGGGTAAGTGCCTCCAGGAAGGCAGGCAGC 425 0.13348409183705517 No Hit GAGATCGGGTGCTGACCTCCAAGTACCGTTAAGCTGCCTTCTGCGGGGCT 415 0.1303432896761833 No Hit GAGATCGGGAGGGCTGGTGTTAGGCAACCAATAATAACATATTGTATGAG 405 0.1272024875153114 No Hit GAGATCGGGACAGGCTGCCTTCCAGAAGGTGGTGGCTGGAGTGGCCGCTG 399 0.1253180062187883 No Hit GAGATCGGGCAGTCGGGCGTCTTGGCGCACGCCTTTAATCCCAGCATTCG 390 0.12249128427400359 No Hit GAGATCGGGAGCGTTCTTGTAATTTCACGCGCTTTTGTGATGGAGTGCTG 364 0.11432519865573668 No Hit GAGATCGGGTCAAGCGCGCCCTGGCCAACAGCCTCGCTTGTCAAGGAAAG 338 0.10615911303746978 No Hit GAGATCGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCA 337 0.10584503282138258 No Hit GAGATCGGGGTCCATGCCAAATGTTAACTGCCAAGCTTGGAGTGACCTAA 336 0.1055309526052954 No Hit GAGATCGGGGTATTATATGTGGCTATATTTCCTAGAGCACCTGTGTTTTT 336 0.1055309526052954 No Hit GAGATCGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCT 325 0.10207607022833631 No Hit GAGATCGGGGCACGCAGGGCGGGGTCTCATTCTTGCGCTGGCCCCCAAGA 322 0.10113382958007475 No Hit GAGATCGGGGCACATACACACTATGAAGAGGTCTTCAGATAAACAACTTC 320 0.10050566914790036 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.0940042086748956 0.0 0.0 0.0 0.0 3 3.0940042086748956 0.0 0.0 0.0 0.0 4 3.0940042086748956 0.0 0.0 0.0 0.0 5 3.0940042086748956 0.0 0.0 0.0 0.0 6 3.0940042086748956 0.0 0.0 0.0 0.0 7 3.1156757435849114 0.0 0.0 0.0 0.0 8 3.147711925625805 0.0 0.0 0.0 0.0 9 3.1621596155658156 0.0 0.0 0.0 0.0 10 3.1948239580388833 0.0 0.0 0.0 0.0 11 3.231257263104997 0.0 0.0 0.0 0.0 12 3.2532428782311 0.0 0.0 0.0 0.0 13 3.2915606645937374 0.0 0.0 0.0 0.0 14 3.3882973711485915 0.0 0.0 0.0 0.0 15 3.4234743553503564 0.0 0.0 0.0 0.0 16 3.4822073557586606 0.0 0.0 0.0 0.0 17 3.514243537799554 0.0 0.0 0.0 0.0 18 3.5550739658908888 0.0 0.0 0.0 0.0 19 3.58396934577091 0.0 0.0 0.0 0.0 20 3.631395458400075 0.0 0.0 0.0 0.0 21 3.686359496215333 0.0 0.0 0.0 0.0 22 3.737554571437545 0.0 0.0 0.0 0.0 23 3.808850780489337 0.0 0.0 0.0 0.0 24 3.8581613744150256 0.0 0.0 0.0 0.0 25 3.9081001287728885 0.0 0.0 0.0 0.0 26 3.96714720939728 0.0 0.0 0.0 0.0 27 4.009862118785137 0.0 0.0 0.0 0.0 28 4.0824146487012785 0.0 0.0 0.0 0.0 29 4.127014039385659 0.0 0.0 0.0 0.0 30 4.173497911366563 0.0 0.0 0.0 0.0 31 4.210873457080939 0.0 0.0 0.0 0.0 32 4.242909639121832 0.0 0.0 0.0 0.0 33 4.267721976192719 0.0 0.0 0.0 0.0 34 4.309180564716229 0.0 0.0 0.0 0.0 35 4.360061559722353 0.0 0.0 0.0 0.0 36 4.393039982411508 0.0 0.0 0.0 0.0 37 4.424762084236314 0.0 0.0 0.0 0.0 38 4.44863218065894 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 40 8.28004E-9 44.0 25 TCGCCTA 20 7.847897E-4 44.0 32 ACAACCG 20 7.847897E-4 44.0 25 TTAGGTT 25 4.435568E-5 44.0 37 TTCTACG 20 7.847897E-4 44.0 18 TTCTAAG 30 2.5219306E-6 44.0 13 CGGGTCG 30 2.5219306E-6 44.0 6 TCGTTGC 20 7.847897E-4 44.0 37 TCTGACG 25 4.435568E-5 44.0 27 GATACCG 20 7.847897E-4 44.0 11 CAAACCG 40 8.28004E-9 44.0 30 CGAACGG 20 7.847897E-4 44.0 11 ACGCCTA 25 4.435568E-5 44.0 32 TCCGCAT 25 4.435568E-5 44.0 32 ATAGGTG 25 4.435568E-5 44.0 10 TACTTGC 20 7.847897E-4 44.0 30 CAAGTAA 20 7.847897E-4 44.0 29 ATAGGCG 20 7.847897E-4 44.0 32 CGCGGAC 25 4.435568E-5 44.0 34 ACGTTCC 20 7.847897E-4 44.0 24 >>END_MODULE