##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527635_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 473406 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13314364414477 33.0 31.0 34.0 31.0 34.0 2 31.914445528785016 31.0 31.0 34.0 30.0 34.0 3 32.490494417054286 34.0 31.0 34.0 31.0 34.0 4 36.03916933879165 37.0 35.0 37.0 35.0 37.0 5 35.98745474286342 37.0 35.0 37.0 35.0 37.0 6 36.13052855265882 37.0 37.0 37.0 35.0 37.0 7 36.500948445942804 37.0 37.0 37.0 35.0 37.0 8 36.630055385863294 37.0 37.0 37.0 35.0 37.0 9 38.58039399585134 39.0 39.0 39.0 37.0 39.0 10 37.98313498350253 39.0 38.0 39.0 35.0 39.0 11 37.62392534103919 39.0 37.0 39.0 35.0 39.0 12 37.45230098477839 39.0 37.0 39.0 35.0 39.0 13 37.379678331073116 39.0 37.0 39.0 35.0 39.0 14 38.25128325369767 40.0 38.0 40.0 35.0 40.0 15 38.25689154763565 40.0 38.0 40.0 35.0 40.0 16 38.261249329328315 40.0 38.0 40.0 35.0 40.0 17 38.26511070835604 40.0 38.0 40.0 34.0 40.0 18 38.192834480340345 40.0 38.0 40.0 34.0 40.0 19 38.169442296886814 40.0 38.0 40.0 34.0 40.0 20 38.17210386011162 40.0 38.0 40.0 34.0 40.0 21 38.196324085457306 40.0 38.0 40.0 34.0 40.0 22 38.16065702589321 40.0 38.0 40.0 34.0 40.0 23 38.07617985407874 40.0 38.0 40.0 34.0 40.0 24 37.96344786504607 40.0 38.0 40.0 34.0 40.0 25 37.828155959155566 40.0 37.0 40.0 34.0 40.0 26 37.70600076889604 40.0 37.0 40.0 33.0 40.0 27 37.689477953384625 40.0 37.0 40.0 34.0 40.0 28 37.62208337029949 40.0 37.0 40.0 33.0 40.0 29 37.48928826419606 40.0 37.0 40.0 33.0 40.0 30 37.36793365525574 40.0 36.0 40.0 33.0 40.0 31 37.277155338124146 40.0 36.0 40.0 33.0 40.0 32 37.12730510386434 39.0 36.0 40.0 32.0 40.0 33 37.04059940093704 39.0 36.0 40.0 32.0 40.0 34 36.958112064485874 39.0 36.0 40.0 32.0 40.0 35 36.88009446437096 39.0 35.0 40.0 32.0 40.0 36 36.51360565772297 39.0 35.0 40.0 31.0 40.0 37 36.53963616853187 39.0 35.0 40.0 31.0 40.0 38 36.458992915172175 39.0 35.0 40.0 31.0 40.0 39 36.31981005732923 39.0 35.0 40.0 30.0 40.0 40 36.1066737641686 39.0 35.0 40.0 30.0 40.0 41 35.976322649058105 38.0 35.0 40.0 30.0 40.0 42 35.84591450044993 38.0 35.0 40.0 30.0 40.0 43 35.60784823175034 38.0 35.0 40.0 29.0 40.0 44 35.29550111320938 38.0 35.0 40.0 27.0 40.0 45 35.13417447180644 38.0 34.0 40.0 26.0 40.0 46 34.88199980566364 38.0 34.0 40.0 26.0 40.0 47 34.68363730075242 37.0 34.0 40.0 25.0 40.0 48 34.56530124248531 37.0 34.0 40.0 24.0 40.0 49 34.79977017612789 37.0 34.0 40.0 26.0 40.0 50 34.7281403277525 37.0 34.0 40.0 26.0 40.0 51 34.693438612945336 37.0 34.0 40.0 26.0 40.0 52 34.24183681660139 37.0 34.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 0.0 15 3.0 16 10.0 17 28.0 18 58.0 19 109.0 20 237.0 21 401.0 22 682.0 23 1141.0 24 1686.0 25 2359.0 26 3327.0 27 4486.0 28 5577.0 29 7002.0 30 8355.0 31 10748.0 32 13893.0 33 17833.0 34 26311.0 35 31196.0 36 47188.0 37 70430.0 38 155630.0 39 64714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.56105330308446 0.3470593951069484 0.04626050366915502 0.045626798139440566 8 98.90474560947685 0.937672948800818 0.06358178814801672 0.09399965357431042 9 91.93018254943959 5.813614529600385 1.0614567622717075 1.1947461586883141 10 40.28529422947745 40.71811510627242 9.808916659273436 9.187674004976701 11 31.25900389940136 23.70966992391309 26.47685073699953 18.55447543968602 12 27.278488232088314 22.491476660625338 26.020160285251983 24.209874822034365 13 27.239832194775733 20.861374803023196 27.438182025576356 24.460610976624718 14 25.472216237225553 24.163403083188637 26.113314998120007 24.251065681465803 15 25.627051621652452 23.342965657384994 29.64347726898265 21.386505451979907 16 27.57569612552439 26.973464637119086 23.853309843981698 21.59752939337482 17 30.354072402969123 23.248121063104396 24.198045652146362 22.19976088178012 18 24.048068676780606 24.073628133145757 27.92000946333591 23.958293726737725 19 25.836808151987935 26.70308361110759 25.634867323185595 21.82524091371888 20 24.229942163808655 26.122609345889153 26.999869034190528 22.647579456111664 21 29.68910406712209 23.0918070324415 26.72547453982417 20.493614360612245 22 25.36617617858667 24.473707557572148 23.834298678090267 26.325817585750922 23 23.70396657414566 27.056480061511685 25.345686366459237 23.89386699788342 24 26.130425047422296 27.173715584508855 23.49167522169132 23.20418414637753 25 24.90568349366083 26.658301753674436 26.080362310574856 22.355652442089877 26 26.094726302581716 26.365318563769787 23.623908442225066 23.91604669142343 27 22.640186224931664 27.62998356590326 25.955944791574254 23.77388541759082 28 23.70544522038166 27.08605298623169 26.549726872916697 22.658774920469956 29 26.2096382386366 24.92511712990541 23.71368339226795 25.15156123919004 30 24.880335272472255 25.442220842152402 27.984436192190216 21.69300769318513 31 28.84078359801101 26.488046201357818 22.21687093108241 22.45429926954876 32 25.157264588957467 27.609704988952398 24.396395482946982 22.836634939143146 33 26.49966413606925 25.884336066716518 26.790534974208185 20.825464823006044 34 22.180538480712116 26.418549828265803 29.572713484831205 21.82819820619088 35 27.738769681837578 27.412833804387777 24.32626540432525 20.522131109449393 36 25.572764181273577 28.824518489415006 24.22656240098351 21.376154928327903 37 24.477721025927003 31.2564690772825 22.786572202295705 21.47923769449479 38 24.034972095833172 31.21232092537906 23.31275902713527 21.439947951652492 39 23.069204868548347 29.353451371549998 25.44179837179926 22.13554538810239 40 23.810429103137686 29.907310004520433 24.90082508459969 21.381435807742193 41 22.44859591978133 30.03700840293532 25.822021689627935 21.692373987655415 42 22.329459280195014 30.031305053167895 24.15643232236178 23.482803344275315 43 23.628133145756497 28.51294660397207 25.292455101963217 22.566465148308218 44 23.38500145752272 29.944487395597015 23.954069023206294 22.71644212367397 45 22.981542270271184 29.67811983794037 24.259726323705234 23.08061156808321 46 23.96906672074287 27.18132005086543 24.449204277089855 24.40040895130184 47 23.06329028360435 27.36826318213119 25.319281969387795 24.24916456487666 48 23.325644372906133 27.33657790564547 25.44327701803526 23.894500703413136 49 23.420066496833584 28.391275142266892 25.878421481772516 22.310236879127007 50 23.979206009218306 28.959497767244187 24.5022243064093 22.559071917128215 51 22.012184044984643 28.522874657270926 25.996501945475973 23.468439352268454 52 23.068782398195207 28.600820437425806 25.249151890766065 23.081245273612925 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 13.0 6 26.0 7 29.0 8 32.0 9 87.5 10 143.0 11 1281.5 12 2420.0 13 2613.5 14 3142.0 15 3477.0 16 2623.0 17 1769.0 18 1664.5 19 1560.0 20 1799.0 21 2038.0 22 1857.0 23 1676.0 24 2061.0 25 2446.0 26 2998.5 27 3551.0 28 3939.0 29 4327.0 30 5532.5 31 6738.0 32 7858.0 33 8978.0 34 9426.0 35 9874.0 36 11539.5 37 13205.0 38 14456.0 39 16595.0 40 17483.0 41 17879.0 42 18275.0 43 20533.5 44 22792.0 45 23865.0 46 24938.0 47 24435.0 48 23932.0 49 24599.5 50 25267.0 51 26823.0 52 28379.0 53 29195.5 54 30012.0 55 30821.5 56 31631.0 57 31574.0 58 31517.0 59 30930.5 60 30344.0 61 30392.5 62 30441.0 63 26634.5 64 21156.0 65 19484.0 66 15993.5 67 12503.0 68 11244.0 69 9985.0 70 7402.0 71 4819.0 72 4174.0 73 3529.0 74 3054.5 75 2580.0 76 1925.0 77 1270.0 78 784.5 79 299.0 80 265.5 81 232.0 82 152.5 83 73.0 84 42.0 85 11.0 86 8.0 87 5.0 88 3.5 89 1.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 473406.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.819664305057392 #Duplication Level Percentage of deduplicated Percentage of total 1 73.39469216334554 8.675006231437708 2 8.980430703243677 2.122913524543415 3 3.772674470556697 1.3377523732272087 4 1.8872308104727014 0.8922573858379489 5 1.0687159324457154 0.6315931779487374 6 0.6862657492628005 0.4866858468206994 7 0.4753820033955857 0.3933198987761034 8 0.34134572424269505 0.32276734980122773 9 0.29309266374765436 0.3117831206195105 >10 4.09614869091234 13.304225126001784 >50 2.98811544991511 25.304917977380935 >100 1.971226878741846 41.291618610664 >500 0.03216870699669377 2.6459318217344094 >1k 0.012510052720936466 2.2792275552063135 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGATCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2080 0.43936916726868686 No Hit GAGATCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGAGATCGGGAAG 1845 0.38972890077438815 No Hit GAGATCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1615 0.3411448101629468 No Hit GAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAA 1561 0.32973811062808667 Illumina Single End Adapter 2 (100% over 34bp) GAGATCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1450 0.30629100602865195 No Hit GAGATCGGGATCTTGGATCCTTTTGAAAAGTTAAGAATATATGAAGGTAAAT 1164 0.2458777455292075 No Hit GAGATCGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 1075 0.22707781481434539 No Hit GAGATCGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 996 0.21039023586519817 No Hit GAGATCGGGGTGGTTATCCAGTCTGTGTGCCAAAGTCAGCCATATCTCCCAC 994 0.20996776551205518 No Hit GAGATCGGGGCTGGAAGCAGAGACTCCTGTGCGTCTCTCTCACGCTACCCCT 897 0.18947795338462123 No Hit GAGATCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 841 0.1776487834966181 No Hit GAGATCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 827 0.17469149102461734 No Hit GAGATCGGAGATGGAGAAGACACCATACTGAAGCTAAAAGTGATACCTGAAA 802 0.16941061161033025 No Hit GAGATCGGGGACTTCAAGTAGCCAAGCCGGCTTCGAGAGTCGTATCTATTGT 798 0.1685656709040443 No Hit GAGATCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 715 0.15103315124861114 No Hit GAGATCGGGAGGGCTGGTGTTAGGCAACCAATAATAACATATTGTATGAGAC 651 0.13751409994803615 No Hit GAGATCGGGTGCTGACCTCCAAGTACCGTTAAGCTGCCTTCTGCGGGGCTTG 618 0.13054333912117716 No Hit GAGATCGGGACAGGCTGCCTTCCAGAAGGTGGTGGCTGGAGTGGCCGCTGCC 602 0.12716357629603345 No Hit GAGATCGGGCAGTCGGGCGTCTTGGCGCACGCCTTTAATCCCAGCATTCGGG 577 0.12188269688174633 No Hit GAGATCGGGGAGGGGGAGGTGGGGTAAGTGCCTCCAGGAAGGCAGGCAGCCT 575 0.12146022652860336 No Hit GAGATCGGGGTCCATGCCAAATGTTAACTGCCAAGCTTGGAGTGACCTAAAG 541 0.1142782305251729 No Hit GAGATCGGGAGCGTTCTTGTAATTTCACGCGCTTTTGTGATGGAGTGCTGTT 535 0.113010819465744 No Hit GAGATCGGGTCAAGCGCGCCCTGGCCAACAGCCTCGCTTGTCAAGGAAAGTA 535 0.113010819465744 No Hit GAGATCGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCATG 521 0.11005352699374321 No Hit GAGATCGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 501 0.10582882346231352 No Hit GAGATCGGGGTATTATATGTGGCTATATTTCCTAGAGCACCTGTGTTTTTCT 498 0.10519511793259909 No Hit GAGATCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 494 0.10435017722631314 No Hit GAGATCGGGGCACGCAGGGCGGGGTCTCATTCTTGCGCTGGCCCCCAAGAGC 483 0.10202659028402683 No Hit GAGATCGGGGTGCTCGCTTCGGCAGCACATATACTAAAATTGGAACGATACA 481 0.10160411993088386 No Hit GAGATCGGGGTTAAGCTGCCTTCTGCGGGGCTTGCCTTCTGGCCATGCCCTT 478 0.1009704144011694 No Hit GAGATCGGTAGTGCAGTGCTGAGATCGGGGTGCTGACCTCCAAGTACCGTTA 477 0.1007591792245979 No Hit GAGATCGAGGATCGGGTGGTTCTTGGTGGAGATCATTATTTTAGATTTAATC 476 0.10054794404802643 No Hit GAGATCGGGGCACATACACACTATGAAGAGGTCTTCAGATAAACAACTTCCA 475 0.10033670887145493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.752605585903009 0.0 0.0 0.0 0.0 3 2.752605585903009 0.0 0.0 0.0 0.0 4 2.752605585903009 0.0 0.0 0.0 0.0 5 2.752605585903009 0.0 0.0 0.0 0.0 6 2.752605585903009 0.0 0.0 0.0 0.0 7 2.7692931648521566 0.0 0.0 0.0 0.0 8 2.798021148865878 0.0 0.0 0.0 0.0 9 2.8147087278150256 0.0 0.0 0.0 0.0 10 2.843225476652176 0.0 0.0 0.0 0.0 11 2.8746995179613273 0.0 0.0 0.0 0.0 12 2.8932882134996176 0.0 0.0 0.0 0.0 13 2.927508312104198 0.0 0.0 0.0 0.0 14 3.0014406239042177 0.0 0.0 0.0 0.0 15 3.024254022973938 0.0 0.0 0.0 0.0 16 3.067557234171092 0.0 0.0 0.0 0.0 17 3.0962852181848137 0.0 0.0 0.0 0.0 18 3.1321951982019662 0.0 0.0 0.0 0.0 19 3.1659928264534036 0.0 0.0 0.0 0.0 20 3.2057050396488425 0.0 0.0 0.0 0.0 21 3.253444189553998 0.0 0.0 0.0 0.0 22 3.2984372821637242 0.0 0.0 0.0 0.0 23 3.357371896427168 0.0 0.0 0.0 0.0 24 3.402576224213466 0.0 0.0 0.0 0.0 25 3.4477805519997635 0.0 0.0 0.0 0.0 26 3.491717468726632 0.0 0.0 0.0 0.0 27 3.5280499190969272 0.0 0.0 0.0 0.0 28 3.5907867665386584 0.0 0.0 0.0 0.0 29 3.6319776259700975 0.0 0.0 0.0 0.0 30 3.6725347798718224 0.0 0.0 0.0 0.0 31 3.6999953528261154 0.0 0.0 0.0 0.0 32 3.732525570018124 0.0 0.0 0.0 0.0 33 3.7612535540318457 0.0 0.0 0.0 0.0 34 3.795051182283283 0.0 0.0 0.0 0.0 35 3.8398330397164377 0.0 0.0 0.0 0.0 36 3.868772258906731 0.0 0.0 0.0 0.0 37 3.9000350650393107 0.0 0.0 0.0 0.0 38 3.9268619324638894 0.0 0.0 0.0 0.0 39 3.9492528611804665 0.0 0.0 0.0 0.0 40 3.9710100843673297 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGCC 35 1.0178701E-7 46.000004 27 CGCGCAA 35 1.0178701E-7 46.000004 10 GCGCCGT 35 1.0178701E-7 46.000004 17 TAACGCG 75 0.0 46.000004 34 CTGACGC 35 1.0178701E-7 46.000004 34 ACCCTCG 35 1.0178701E-7 46.000004 26 ATCGTCC 35 1.0178701E-7 46.000004 32 CGGATTG 35 1.0178701E-7 46.000004 6 ACGTGTT 35 1.0178701E-7 46.000004 43 TGTCGCA 35 1.0178701E-7 46.000004 46 TAGTAAC 35 1.0178701E-7 46.000004 26 TCACGCG 25 3.4140896E-5 46.0 25 TATTTCG 20 6.307676E-4 46.0 29 ATTTACG 25 3.4140896E-5 46.0 46 ATTTACC 25 3.4140896E-5 46.0 22 GTTGACG 25 3.4140896E-5 46.0 16 GTTGACC 20 6.307676E-4 46.0 41 ACAACCG 20 6.307676E-4 46.0 25 TTTAGCG 25 3.4140896E-5 46.0 42 AACGTCG 40 5.5988494E-9 46.0 23 >>END_MODULE