##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527634_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 476055 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.080360462551596 33.0 31.0 34.0 31.0 34.0 2 31.87331295753642 31.0 31.0 34.0 30.0 34.0 3 32.46351577023663 34.0 31.0 34.0 31.0 34.0 4 36.01554442238817 37.0 35.0 37.0 35.0 37.0 5 36.00902416737562 37.0 35.0 37.0 35.0 37.0 6 36.075982817111466 37.0 37.0 37.0 35.0 37.0 7 36.470214576046885 37.0 37.0 37.0 35.0 37.0 8 36.607807921353626 37.0 37.0 37.0 35.0 37.0 9 38.53523227358183 39.0 39.0 39.0 37.0 39.0 10 37.905733581203854 39.0 38.0 39.0 35.0 39.0 11 37.591458970076985 39.0 37.0 39.0 35.0 39.0 12 37.38864626986378 39.0 37.0 39.0 35.0 39.0 13 37.18535043219796 39.0 37.0 39.0 34.0 39.0 14 38.18972177584523 40.0 38.0 40.0 34.0 40.0 15 38.2125258636082 40.0 38.0 40.0 34.0 40.0 16 38.24011931394482 40.0 38.0 40.0 34.0 40.0 17 38.27747004022645 40.0 38.0 40.0 34.0 40.0 18 38.21639306382666 40.0 38.0 40.0 34.0 40.0 19 38.150839713898606 40.0 38.0 40.0 34.0 40.0 20 38.17361229269727 40.0 38.0 40.0 34.0 40.0 21 38.2588650471059 40.0 38.0 40.0 34.0 40.0 22 38.114001533436266 40.0 38.0 40.0 34.0 40.0 23 38.05243931898625 40.0 38.0 40.0 34.0 40.0 24 37.98832277783029 40.0 38.0 40.0 34.0 40.0 25 37.81775215048681 40.0 37.0 40.0 34.0 40.0 26 37.64982827614456 40.0 37.0 40.0 33.0 40.0 27 37.64868134984403 40.0 37.0 40.0 33.0 40.0 28 37.5930029093277 40.0 37.0 40.0 33.0 40.0 29 37.45637583892618 40.0 37.0 40.0 33.0 40.0 30 37.32219806534959 40.0 36.0 40.0 33.0 40.0 31 37.25722448036466 40.0 36.0 40.0 33.0 40.0 32 37.10158280030669 39.0 36.0 40.0 32.0 40.0 33 36.84308745838191 39.0 35.0 40.0 31.0 40.0 34 36.868502588986566 39.0 35.0 40.0 31.0 40.0 35 36.86327420151033 39.0 35.0 40.0 32.0 40.0 36 36.36891955761414 39.0 35.0 40.0 30.0 40.0 37 36.45802480805789 39.0 35.0 40.0 31.0 40.0 38 36.1049626618773 39.0 35.0 40.0 30.0 40.0 39 36.137826511642565 39.0 35.0 40.0 30.0 40.0 40 35.99921017529487 38.0 35.0 40.0 30.0 40.0 41 35.67704361890958 38.0 35.0 40.0 29.0 40.0 42 35.6976189725977 38.0 35.0 40.0 29.0 40.0 43 35.58041612838853 38.0 35.0 40.0 29.0 40.0 44 35.258152944512716 38.0 35.0 40.0 27.0 40.0 45 35.06303683397927 38.0 34.0 40.0 26.0 40.0 46 34.65830838873659 38.0 34.0 40.0 24.0 40.0 47 34.38495341924778 37.0 34.0 40.0 23.0 40.0 48 34.409633340685424 37.0 34.0 40.0 24.0 40.0 49 34.35113379756541 37.0 34.0 40.0 24.0 40.0 50 34.08141706315447 37.0 33.0 40.0 23.0 40.0 51 34.330814716786925 37.0 34.0 40.0 24.0 40.0 52 34.059875434561135 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 1.0 16 4.0 17 26.0 18 52.0 19 103.0 20 206.0 21 442.0 22 723.0 23 1126.0 24 1693.0 25 2477.0 26 3500.0 27 4760.0 28 5895.0 29 7263.0 30 8592.0 31 11100.0 32 14556.0 33 18664.0 34 27285.0 35 32713.0 36 49554.0 37 76479.0 38 153543.0 39 55297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 99.55236264717313 0.3484891451617985 0.05104452216655638 0.04810368549852433 8 98.92512419783428 0.911659367089937 0.07037002027076704 0.09284641480501203 9 91.86900673241537 5.862137778197897 1.064582873827604 1.2042726155591266 10 40.38314900589218 40.62009641743076 9.868607618867568 9.128146957809497 11 31.45203810484083 23.643696631691714 26.520885191837078 18.383380071630377 12 27.36910651080232 22.438793836846582 25.961916165148985 24.23018348720211 13 27.48547961895159 20.766718131308355 27.26533698837319 24.48246526136686 14 25.498944449695937 24.10477780928674 26.172816166199286 24.223461574818035 15 25.72223797670437 23.34394135131445 29.436934807952863 21.496885864028318 16 27.583157408282656 26.878406906764972 23.86026824631608 21.678167438636294 17 30.546260411086955 22.98999065234059 24.151831195975255 22.311917740597202 18 24.047851613784122 24.057514362836226 27.96672653369884 23.927907489680813 19 25.837350726281628 26.681160790244824 25.61615779689322 21.865330686580332 20 24.160863765741354 26.17974813834536 26.97986577181208 22.679522324101207 21 29.799708016930815 23.05783995546733 26.681370850006825 20.461081177595027 22 25.43865729800128 24.419027213242167 23.83968238963985 26.3026330991167 23 23.75124722983689 27.000451628488303 25.297707197697743 23.95059394397706 24 26.00749913350348 27.229836888594804 23.55505141212675 23.207612565774962 25 24.783901019840144 26.49189694468076 26.258310489334214 22.465891546144878 26 26.119671046412705 26.083120647824305 23.767421831511065 24.029786474251924 27 22.60663158668641 27.57244436042054 25.861297539149884 23.95962651374316 28 23.796200018905378 27.070821648759075 26.612471248070076 22.520507084265475 29 26.331411286511013 24.813519446282466 23.571015954038923 25.284053313167597 30 24.900484187751417 25.44306855300333 27.9083299198622 21.748117339383054 31 28.95316717606159 26.428879016080074 22.197645230067955 22.420308577790383 32 25.263887576015374 27.630210794971173 24.2474083876863 22.858493241327157 33 26.635577821890326 25.762569451008808 26.745649137179527 20.856203589921332 34 22.338385270609486 26.312715967692807 29.471174549159233 21.877724212538467 35 27.749944859312475 27.439266471311086 24.339834682967304 20.470953986409132 36 26.01737194231759 28.630935501150077 24.06885758998435 21.282834966547984 37 24.60724075999622 31.067628740376634 22.79715579082249 21.527974708804653 38 24.28059783008266 31.165096469945702 23.14774553360431 21.40656016636733 39 23.100482087153797 29.20460871117833 25.395805106552814 22.29910409511506 40 23.928747728728826 29.756645765720346 24.997951917320478 21.316654588230353 41 22.826774217264813 29.89990652340591 25.661530705485713 21.61178855384357 42 22.240077301992418 29.96691558748464 24.199724821711776 23.593282288811164 43 23.63865519740366 28.388946655323437 25.342659986766236 22.629738160506662 44 23.51766077449034 29.822394471227064 23.857537469410047 22.802407284872547 45 22.95953198685026 29.553517975864136 24.431420739200302 23.055529298085307 46 24.191112371469682 26.891220552247113 24.52594763210133 24.39171944418187 47 23.348352606316496 27.319742466731782 25.226917057902977 24.104987869048745 48 23.427965256115364 27.135520055455775 25.501045047315962 23.935469641112896 49 23.288485574145845 28.28895820861035 25.93019714108664 22.492359076157168 50 24.11276008024283 29.028368570858408 24.330802113201205 22.528069235697558 51 22.18462152482381 28.54397075968113 25.80374116436126 23.4676665511338 52 23.272100912709664 28.41121299009568 25.187635882408543 23.129050214786105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 12.0 6 24.0 7 27.0 8 30.0 9 95.5 10 161.0 11 1172.0 12 2183.0 13 2505.5 14 3073.0 15 3318.0 16 2559.5 17 1801.0 18 1740.5 19 1680.0 20 1810.5 21 1941.0 22 1853.0 23 1765.0 24 2072.0 25 2379.0 26 2969.0 27 3559.0 28 3947.0 29 4335.0 30 5517.0 31 6699.0 32 7832.5 33 8966.0 34 9306.5 35 9647.0 36 11396.0 37 13145.0 38 14478.0 39 16531.5 40 17252.0 41 17781.0 42 18310.0 43 20601.5 44 22893.0 45 23645.0 46 24397.0 47 24394.5 48 24392.0 49 24871.5 50 25351.0 51 27034.5 52 28718.0 53 29711.0 54 30704.0 55 31315.0 56 31926.0 57 31895.5 58 31865.0 59 31323.5 60 30782.0 61 30821.5 62 30861.0 63 26929.5 64 21327.0 65 19656.0 66 16131.0 67 12606.0 68 11328.0 69 10050.0 70 7511.5 71 4973.0 72 4224.5 73 3476.0 74 3033.5 75 2591.0 76 1964.5 77 1338.0 78 824.0 79 310.0 80 280.5 81 251.0 82 161.5 83 72.0 84 41.0 85 10.0 86 5.0 87 0.0 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 476055.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.775278066609951 #Duplication Level Percentage of deduplicated Percentage of total 1 77.0409725828573 12.153427650166472 2 9.254450791621727 2.919830691831826 3 3.2343972622804564 1.5307054857106845 4 1.561938241521192 0.9856004033147431 5 0.8428873886469859 0.6648391467372468 6 0.5632565014181281 0.5331316759618111 7 0.33688864032810023 0.37201583850605496 8 0.23968361762473533 0.3024860572832971 9 0.1970731967136713 0.2797996029870498 >10 3.2184183544388074 14.126939114177983 >50 2.1078842594442 23.834640955351798 >100 1.3701913474214038 37.695854470596885 >500 0.022636786109002785 2.4434151516106333 >1k 0.009321029574295264 2.1573137557635147 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAGATCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2000 0.42011952400457925 No Hit GAGATCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGAGATCGGGAAG 1864 0.3915513963722679 No Hit GAGATCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1451 0.3047967146653223 No Hit GAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAA 1448 0.30416653537931543 Illumina Single End Adapter 2 (100% over 34bp) GAGATCGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1314 0.2760185272710086 No Hit GAGATCGGGATCTTGGATCCTTTTGAAAAGTTAAGAATATATGAAGGTAAAT 1135 0.23841782987259874 No Hit GAGATCGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCTC 1058 0.22224322819842246 No Hit GAGATCGGGGTGGTTATCCAGTCTGTGTGCCAAAGTCAGCCATATCTCCCAC 954 0.2003970129501843 No Hit GAGATCGGGACATTTGCTTCTGACATAGTTGTGTTGACTCACAACCCCAGAA 946 0.19871653485416604 No Hit GAGATCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 876 0.18401235151400572 No Hit GAGATCGGGGCTGGAAGCAGAGACTCCTGTGCGTCTCTCTCACGCTACCCCT 846 0.17771055865393703 No Hit GAGATCGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 792 0.1663673315058134 No Hit GAGATCGGAGATGGAGAAGACACCATACTGAAGCTAAAAGTGATACCTGAAA 776 0.16300637531377676 No Hit GAGATCGGGGACTTCAAGTAGCCAAGCCGGCTTCGAGAGTCGTATCTATTGT 765 0.16069571793175158 No Hit GAGATCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 658 0.1382193233975066 No Hit GAGATCGGGTGCTGACCTCCAAGTACCGTTAAGCTGCCTTCTGCGGGGCTTG 625 0.13128735125143104 No Hit GAGATCGGGAGGGCTGGTGTTAGGCAACCAATAATAACATATTGTATGAGAC 604 0.12687609624938295 No Hit GAGATCGGGGAGGGGGAGGTGGGGTAAGTGCCTCCAGGAAGGCAGGCAGCCT 593 0.12456543886735776 No Hit GAGATCGGGACAGGCTGCCTTCCAGAAGGTGGTGGCTGGAGTGGCCGCTGCC 584 0.12267490100933715 No Hit GAGATCGGGAGCGTTCTTGTAATTTCACGCGCTTTTGTGATGGAGTGCTGTT 540 0.11343227148123641 No Hit GAGATCGGGGTCCATGCCAAATGTTAACTGCCAAGCTTGGAGTGACCTAAAG 538 0.11301215195723183 No Hit GAGATCGGGCAGTCGGGCGTCTTGGCGCACGCCTTTAATCCCAGCATTCGGG 530 0.11133167386121352 No Hit GAGATCGGGGACTTCTGATTCTGACAGACTCAGGAAGAAACCATGGTGCTCT 504 0.10587012004915398 No Hit GAGATCGGGTCAAGCGCGCCCTGGCCAACAGCCTCGCTTGTCAAGGAAAGTA 501 0.10523994076314712 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.7280461291237357 0.0 0.0 0.0 0.0 3 2.7280461291237357 0.0 0.0 0.0 0.0 4 2.7280461291237357 0.0 0.0 0.0 0.0 5 2.7280461291237357 0.0 0.0 0.0 0.0 6 2.7280461291237357 0.0 0.0 0.0 0.0 7 2.7414899538918824 0.0 0.0 0.0 0.0 8 2.76606694604615 0.0 0.0 0.0 0.0 9 2.7839220258163446 0.0 0.0 0.0 0.0 10 2.815851109640693 0.0 0.0 0.0 0.0 11 2.8503009106090684 0.0 0.0 0.0 0.0 12 2.8685761099032674 0.0 0.0 0.0 0.0 13 2.8990347753935994 0.0 0.0 0.0 0.0 14 2.976336767810442 0.0 0.0 0.0 0.0 15 3.004694835680751 0.0 0.0 0.0 0.0 16 3.047547027129218 0.0 0.0 0.0 0.0 17 3.0725441388074906 0.0 0.0 0.0 0.0 18 3.107624119061873 0.0 0.0 0.0 0.0 19 3.1353520076461754 0.0 0.0 0.0 0.0 20 3.172742645282583 0.0 0.0 0.0 0.0 21 3.2225268088771255 0.0 0.0 0.0 0.0 22 3.273571331043682 0.0 0.0 0.0 0.0 23 3.3302874667843003 0.0 0.0 0.0 0.0 24 3.3741899570427787 0.0 0.0 0.0 0.0 25 3.4138912520612115 0.0 0.0 0.0 0.0 26 3.4538026068416463 0.0 0.0 0.0 0.0 27 3.491613364002059 0.0 0.0 0.0 0.0 28 3.5552614718887523 0.0 0.0 0.0 0.0 29 3.5962231254791988 0.0 0.0 0.0 0.0 30 3.629202508113558 0.0 0.0 0.0 0.0 31 3.660921532175904 0.0 0.0 0.0 0.0 32 3.689069540284211 0.0 0.0 0.0 0.0 33 3.7151169507724946 0.0 0.0 0.0 0.0 34 3.753137767694909 0.0 0.0 0.0 0.0 35 3.790738465093319 0.0 0.0 0.0 0.0 36 3.8201468317736396 0.0 0.0 0.0 0.0 37 3.847454600833937 0.0 0.0 0.0 0.0 38 3.869930995368182 0.0 0.0 0.0 0.0 39 3.8963985253804707 0.0 0.0 0.0 0.0 40 3.920555398010734 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 40 5.5988494E-9 46.0 25 CAGGTCG 20 6.307712E-4 46.0 20 AACGTCT 25 3.414119E-5 46.0 17 CGGGTCG 25 3.414119E-5 46.0 6 CCTTATT 20 6.307712E-4 46.0 45 TCGTTGC 25 3.414119E-5 46.0 37 TCGTTAG 55 1.8189894E-12 46.0 28 ACCGGTA 25 3.414119E-5 46.0 24 CGAACCC 20 6.307712E-4 46.0 45 ACGCCTA 20 6.307712E-4 46.0 32 CGTATTT 20 6.307712E-4 46.0 13 CGTATTG 30 1.859089E-6 46.0 13 AGTCATA 25 3.414119E-5 46.0 42 CTCGTCA 25 3.414119E-5 46.0 28 GTACACC 20 6.307712E-4 46.0 21 GATCGAC 20 6.307712E-4 46.0 28 ATAGGCG 25 3.414119E-5 46.0 32 GTTTCGC 20 6.307712E-4 46.0 17 CGAAAGG 30 1.859089E-6 46.0 23 ACGTTGA 25 3.414119E-5 46.0 41 >>END_MODULE