##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527630_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1129621 Sequences flagged as poor quality 0 Sequence length 50 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.89286849306095 31.0 31.0 34.0 3.0 34.0 2 30.398801013791353 34.0 31.0 34.0 16.0 34.0 3 32.27626876624992 34.0 31.0 34.0 28.0 34.0 4 36.28627300661018 37.0 35.0 37.0 35.0 37.0 5 36.42134131713203 37.0 37.0 37.0 35.0 37.0 6 36.41965136979571 37.0 37.0 37.0 35.0 37.0 7 36.417785257179176 37.0 37.0 37.0 35.0 37.0 8 36.598576867816725 37.0 37.0 37.0 35.0 37.0 9 38.71920228111907 39.0 39.0 39.0 39.0 39.0 10 38.18650768709151 39.0 39.0 39.0 37.0 39.0 11 37.7928464502696 39.0 38.0 39.0 35.0 39.0 12 37.26350342282943 39.0 37.0 39.0 35.0 39.0 13 37.127958846374135 39.0 37.0 39.0 34.0 39.0 14 37.85719015492807 40.0 38.0 40.0 33.0 40.0 15 37.843841430001746 40.0 37.0 40.0 33.0 40.0 16 37.88219854269706 40.0 37.0 40.0 33.0 40.0 17 37.78697279884138 40.0 37.0 40.0 33.0 40.0 18 37.67899410510251 40.0 37.0 40.0 33.0 40.0 19 37.6146291543801 40.0 37.0 40.0 33.0 40.0 20 37.495878706220935 39.0 37.0 40.0 33.0 40.0 21 37.44955874580943 39.0 36.0 40.0 33.0 40.0 22 37.466182905594 39.0 36.0 40.0 33.0 40.0 23 37.428113500014604 39.0 36.0 40.0 33.0 40.0 24 37.36457803103873 39.0 36.0 40.0 33.0 40.0 25 37.337204248150485 39.0 36.0 40.0 33.0 40.0 26 37.21721444626118 39.0 36.0 40.0 33.0 40.0 27 37.0781669250129 39.0 35.0 40.0 33.0 40.0 28 36.949431712052096 39.0 35.0 40.0 32.0 40.0 29 37.147408732663436 39.0 36.0 40.0 33.0 40.0 30 37.41315184473376 40.0 36.0 40.0 33.0 40.0 31 37.50841653970668 40.0 36.0 40.0 33.0 40.0 32 37.49021840068483 40.0 36.0 40.0 33.0 40.0 33 37.396943753701464 40.0 36.0 40.0 33.0 40.0 34 37.01208635462691 40.0 35.0 40.0 32.0 40.0 35 37.008255866348094 40.0 35.0 40.0 32.0 40.0 36 37.087497488095565 40.0 35.0 40.0 33.0 40.0 37 37.06039459252263 39.0 35.0 40.0 33.0 40.0 38 36.995843738740696 39.0 35.0 40.0 33.0 40.0 39 36.91912862809739 39.0 35.0 40.0 33.0 40.0 40 36.78728175202125 39.0 35.0 40.0 32.0 40.0 41 36.65362099323578 39.0 35.0 40.0 32.0 40.0 42 36.59328659789434 39.0 35.0 40.0 32.0 40.0 43 36.46812072367635 39.0 35.0 40.0 32.0 40.0 44 36.12619630831934 38.0 35.0 40.0 31.0 40.0 45 36.097219332855886 38.0 35.0 40.0 31.0 40.0 46 35.94686093831471 38.0 35.0 40.0 31.0 40.0 47 35.88172935878494 38.0 35.0 40.0 31.0 40.0 48 35.80474778708965 37.0 35.0 40.0 31.0 40.0 49 35.7223909612162 37.0 35.0 40.0 30.0 40.0 50 35.191210149244746 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 15.0 15 27.0 16 54.0 17 107.0 18 143.0 19 239.0 20 414.0 21 706.0 22 1126.0 23 1703.0 24 2479.0 25 3601.0 26 4789.0 27 6870.0 28 9371.0 29 12328.0 30 16088.0 31 21831.0 32 31174.0 33 47973.0 34 85343.0 35 84068.0 36 115259.0 37 218682.0 38 352948.0 39 112279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 98.91344087972868 0.9146430528469283 0.11278118944318491 0.059134877981199006 8 99.23673515276363 0.4983972500511234 0.0985286215465187 0.16633897563873193 9 97.52129253971023 1.1834942870219305 0.5360204882876646 0.7591926849801837 10 52.4683057414832 30.0648624627198 8.166544354256871 9.300287441540126 11 35.80599156708312 24.00681290450514 22.48382422068995 17.703371307721795 12 32.54994374219318 17.706292641514278 24.301867617546062 25.44189599874648 13 27.347667934643567 18.614384824644723 26.758974912824744 27.27897232788696 14 26.402218089075895 19.764593611485623 27.698847666606763 26.13434063283172 15 27.73903813757003 20.945343615247946 26.53544861506647 24.780169632115552 16 32.401929496707304 20.937376341268443 24.418101292380364 22.24259286964389 17 30.80457958908342 22.1709759290948 22.894581456966538 24.12986302485524 18 29.624537787452603 21.494023216636375 23.877300439705 25.00413855620602 19 27.742225047161835 23.326938858254227 23.369165410345595 25.56167068423834 20 28.67112066790543 23.463710394902364 23.951130511915057 23.914038425277152 21 29.019202015543264 22.430532010293717 26.267925259888052 22.282340714274966 22 27.789320488907343 21.563515550790928 26.644600268585663 24.002563691716073 23 27.99514173337783 22.374318466105002 26.568911165780378 23.061628634736785 24 28.459545281116412 22.744973756684765 24.49901338590554 24.29646757629329 25 27.814815765641747 23.192557503799947 23.850388758707567 25.142237971850733 26 25.690209371107652 22.592179146811187 24.92951175659801 26.78809972548315 27 25.176674300495478 21.744549720658522 24.553456424765475 28.525319554080532 28 25.73323265059697 23.90987773775452 24.354451625810782 26.00243798583773 29 27.559508897231904 23.223983973385764 23.335437283832363 25.88106984554997 30 27.527462750781012 21.26677885768767 24.42252755570231 26.78323083582901 31 28.693783136113794 22.59518900587011 23.622790298693104 25.088237559322994 32 30.17144688351226 22.60696286630649 24.218830917626356 23.002759332554902 33 30.595748485554005 21.52164309976532 25.36912822973369 22.51348018494699 34 26.27934501925867 23.498500824612854 27.474524641450536 22.747629514677932 35 25.755983644071772 25.488283238360477 27.1855781717939 21.570154945773847 36 25.55759852198215 26.844224744405427 24.175984688669917 23.42219204494251 37 27.324562840103006 26.777211117711165 22.65653701551228 23.241689026673548 38 27.204876679877586 26.519602592373904 23.416437902623976 22.85908282512453 39 27.98965316685862 24.727320048051517 22.907948772198814 24.37507801289105 40 27.17247643236094 24.780700783714185 22.51409986181206 25.532722922112818 41 24.526279167968728 25.348767418452738 24.299211859552894 25.825741554025644 42 23.548429074884407 23.79576866931475 24.664201533080565 27.99160072272028 43 23.00284785782134 23.7870046679373 25.484742227702924 27.725405246538443 44 24.94668565828716 23.51487799890406 25.145070780376784 26.393365562432002 45 26.123097923993978 23.87136924685359 23.526209233008238 26.479323596144194 46 25.097886813364838 25.87699768329378 22.68769790929878 26.337417594042606 47 24.648178459855117 23.851628112437712 25.906830698083695 25.593362729623475 48 26.245970993811195 23.253020260777728 25.03361746993018 25.467391275480892 49 26.498976205293634 23.243459532002326 24.232729384457265 26.02483487824678 50 24.481131282084874 23.051536754362747 26.061926964884684 26.40540499866769 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 14.5 4 29.0 5 19.5 6 10.0 7 25.5 8 41.0 9 409.0 10 777.0 11 954.0 12 1131.0 13 1640.5 14 2150.0 15 2043.0 16 1936.0 17 2022.0 18 2108.0 19 2216.0 20 2324.0 21 2154.5 22 1985.0 23 2874.5 24 3764.0 25 4402.5 26 5041.0 27 6450.5 28 7860.0 29 9310.0 30 10760.0 31 10783.0 32 10806.0 33 13859.5 34 16913.0 35 17674.0 36 18435.0 37 22301.0 38 26167.0 39 27313.0 40 28459.0 41 32281.5 42 36104.0 43 40997.5 44 45891.0 45 50725.5 46 55560.0 47 60041.5 48 64523.0 49 68273.5 50 72024.0 51 77639.0 52 83254.0 53 85667.5 54 88081.0 55 93737.0 56 99393.0 57 103972.5 58 108552.0 59 100875.0 60 93198.0 61 89302.5 62 85407.0 63 72854.0 64 60301.0 65 48240.0 66 36179.0 67 27828.5 68 19478.0 69 17430.5 70 15383.0 71 12793.5 72 10204.0 73 9414.5 74 8625.0 75 6276.5 76 3928.0 77 2697.0 78 1466.0 79 1003.5 80 541.0 81 608.5 82 676.0 83 400.0 84 124.0 85 71.0 86 18.0 87 13.0 88 8.0 89 6.0 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1129621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.888014653493206 #Duplication Level Percentage of deduplicated Percentage of total 1 67.24482724332147 5.976730099102604 2 9.350563492236212 1.6621589067482814 3 3.6118366991908553 0.9630617252529857 4 1.7588916143222535 0.6253221776801005 5 0.9729396367453329 0.43237508741784375 6 0.6179616536774291 0.329547133990913 7 0.4399726982895864 0.27373386526743526 8 0.33097946166550507 0.23534002442306418 9 0.32098008215893614 0.25675881063372696 >10 8.400478723418098 22.225678990817414 >50 4.865698067867214 29.85192225203907 >100 2.0138750326108856 30.365084374780203 >500 0.05099683548319522 2.9954305827618875 >1k 0.018998821062366843 3.150072441710549 >5k 9.999379506508866E-4 0.6567835273739125 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7390 0.6542017189836237 No Hit ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4108 0.3636617945310861 No Hit ATCAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 3665 0.32444510149864425 No Hit ATCAACGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 2457 0.21750657964042805 No Hit ATCAACGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 2453 0.2171524785746724 No Hit ATCAACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2304 0.2039622138752732 No Hit ATCAACGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGC 2241 0.1983851220896212 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 2166 0.19174572710670215 No Hit ATCAACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2028 0.17952924033813109 No Hit ATCAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1874 0.16589634930653732 No Hit ATCAACGGGGGGGTTGGATAGATGGCTCAGCAGTTAAGAGCACCGACTGC 1740 0.15403396360372196 No Hit ATCAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 1631 0.14438470956187963 No Hit ATCAACGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 1225 0.10844345138767782 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCT 1168 0.10339751120065933 No Hit ATCAACGGGACGTGGCTGACGATGACTGGTCTTCCTGGCCATATTACTTT 1141 0.10100732900680848 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.03806586456873588 0.0 0.0 0.0 0.0 8 0.043200330022193284 0.0 0.0 0.0 0.0 9 0.04674134067975011 0.0 0.0 0.0 0.0 10 0.056656170520909224 0.0 0.0 0.0 0.0 11 0.06373819183602288 0.0 0.0 0.0 0.0 12 0.0715284152826479 0.0 0.0 0.0 0.0 13 0.08188587145600161 0.0 0.0 0.0 0.0 14 0.08932199383687095 0.0 0.0 0.0 0.0 15 0.09905977314515223 0.0 0.0 0.0 0.0 16 0.1187123822945926 0.0 0.0 0.0 0.0 17 0.12968951533301878 0.0 0.0 0.0 0.0 18 0.14066664837144494 0.0 0.0 0.0 0.0 19 0.1512896803441154 0.0 0.0 0.0 0.0 20 0.16031925752088533 0.0 0.0 8.852526643892066E-5 0.0 21 0.17023408736204443 0.0 0.0 8.852526643892066E-5 0.0 22 0.17961776560457002 0.0 0.0 8.852526643892066E-5 0.0 23 0.19165720184026325 0.0 0.0 8.852526643892066E-5 0.0 24 0.20130645588210558 0.0 0.0 8.852526643892066E-5 0.0 25 0.2107786593910701 0.0 0.0 8.852526643892066E-5 0.0 26 0.22007381236715678 0.0 0.0 8.852526643892066E-5 0.0 27 0.22892633901104883 0.0 0.0 8.852526643892066E-5 0.0 28 0.24016904784879176 0.0 0.0 8.852526643892066E-5 0.0 29 0.24981830189063411 0.0 0.0 8.852526643892066E-5 0.0 30 0.26114953599481594 0.0 0.0 8.852526643892066E-5 0.0 31 0.27177256796748644 0.0 0.0 8.852526643892066E-5 0.0 32 0.28168739780864555 0.0 0.0 8.852526643892066E-5 0.0 33 0.29107107605117116 0.0 0.0 8.852526643892066E-5 0.0 34 0.30134000695808594 0.0 0.0 8.852526643892066E-5 0.0 35 0.31293681686158453 0.0 0.0 8.852526643892066E-5 0.0 36 0.3264811826267394 0.0 0.0 8.852526643892066E-5 0.0 37 0.3382550430631159 0.0 0.0 8.852526643892066E-5 0.0 38 0.3499403782330534 0.0 0.0 8.852526643892066E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCCG 25 4.4427914E-5 44.0 37 GATCGAC 55 1.8189894E-12 44.0 9 TAGCGGA 20 7.856425E-4 44.0 38 ACCGATT 30 2.5276786E-6 44.0 16 CGATTGG 20 7.856425E-4 44.0 32 AGTATCG 30 2.5276786E-6 44.0 28 ATATCGG 35 1.4460602E-7 44.0 12 TACGCGT 20 7.856425E-4 44.0 35 TACGATA 20 7.856425E-4 44.0 37 CGCTAGT 20 7.856425E-4 44.0 37 GTCGTGT 30 2.5276786E-6 44.0 42 GATATCG 20 7.856425E-4 44.0 11 CGAATAT 35 1.4460602E-7 44.0 30 CTCGCGG 20 7.856425E-4 44.0 43 GGTTATA 20 7.856425E-4 44.0 8 TATCGGG 20 7.856425E-4 44.0 12 CGATACC 20 7.856425E-4 44.0 44 TCGGTCG 20 7.856425E-4 44.0 14 TACGTTA 20 7.856425E-4 44.0 44 TCTATCG 20 7.856425E-4 44.0 37 >>END_MODULE