##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527629_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1445011 Sequences flagged as poor quality 0 Sequence length 52 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11494306963753 33.0 31.0 34.0 31.0 34.0 2 32.645149414087506 34.0 31.0 34.0 31.0 34.0 3 32.69822098240083 34.0 31.0 34.0 31.0 34.0 4 36.43246314387918 37.0 37.0 37.0 35.0 37.0 5 36.43921464957706 37.0 37.0 37.0 35.0 37.0 6 36.276350837467675 37.0 37.0 37.0 35.0 37.0 7 36.32924316839111 37.0 35.0 37.0 35.0 37.0 8 36.54018343112959 37.0 37.0 37.0 35.0 37.0 9 38.66209253770386 39.0 39.0 39.0 38.0 39.0 10 37.99075231953252 39.0 38.0 39.0 35.0 39.0 11 37.58254850655116 39.0 37.0 39.0 35.0 39.0 12 37.0975715755797 39.0 37.0 39.0 34.0 39.0 13 36.98084305240583 39.0 37.0 39.0 33.0 39.0 14 37.73363040142947 40.0 37.0 40.0 33.0 40.0 15 37.753780421048695 40.0 37.0 40.0 33.0 40.0 16 37.79806935725749 40.0 37.0 40.0 33.0 40.0 17 37.72951486182458 40.0 37.0 40.0 33.0 40.0 18 37.7048375410291 40.0 37.0 40.0 33.0 40.0 19 37.67104817887199 40.0 37.0 40.0 33.0 40.0 20 37.62810179299673 40.0 37.0 40.0 33.0 40.0 21 37.59899682424563 40.0 37.0 40.0 33.0 40.0 22 37.572428860403136 40.0 36.0 40.0 33.0 40.0 23 37.56815000024221 40.0 36.0 40.0 33.0 40.0 24 37.508418275016595 40.0 36.0 40.0 33.0 40.0 25 37.50272627682419 40.0 36.0 40.0 33.0 40.0 26 37.37590440487996 40.0 36.0 40.0 33.0 40.0 27 37.28806631921833 39.0 36.0 40.0 33.0 40.0 28 37.20445449896229 39.0 35.0 40.0 33.0 40.0 29 37.10783516526864 39.0 35.0 40.0 33.0 40.0 30 37.02471815093449 39.0 35.0 40.0 32.0 40.0 31 36.92383656595002 39.0 35.0 40.0 32.0 40.0 32 36.80826305128473 39.0 35.0 40.0 32.0 40.0 33 36.703199491214946 39.0 35.0 40.0 31.0 40.0 34 36.447806279675376 39.0 35.0 40.0 31.0 40.0 35 36.342188398565824 38.0 35.0 40.0 30.0 40.0 36 36.397620502542885 38.0 35.0 40.0 31.0 40.0 37 36.354907332885354 38.0 35.0 40.0 31.0 40.0 38 36.27033081409069 38.0 35.0 40.0 31.0 40.0 39 36.20078393866898 38.0 35.0 40.0 31.0 40.0 40 36.03750974906073 38.0 35.0 40.0 30.0 40.0 41 35.894884537211134 38.0 35.0 40.0 30.0 40.0 42 35.8435825056003 38.0 34.0 40.0 30.0 40.0 43 35.68872762906303 38.0 34.0 40.0 30.0 40.0 44 35.5755084217352 37.0 34.0 40.0 30.0 40.0 45 35.442392480057244 37.0 34.0 40.0 29.0 40.0 46 35.328267397272406 37.0 34.0 40.0 29.0 40.0 47 35.120156178741894 37.0 34.0 40.0 29.0 40.0 48 34.91369754278687 36.0 34.0 40.0 28.0 40.0 49 35.30865370575034 37.0 34.0 40.0 29.0 40.0 50 35.39959280586791 37.0 34.0 40.0 30.0 40.0 51 35.419067398102854 36.0 34.0 40.0 30.0 40.0 52 34.97252962088178 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 4.0 15 14.0 16 41.0 17 88.0 18 182.0 19 370.0 20 618.0 21 1089.0 22 1774.0 23 2804.0 24 4244.0 25 5940.0 26 8162.0 27 11006.0 28 14751.0 29 18850.0 30 24609.0 31 31533.0 32 41994.0 33 60299.0 34 114847.0 35 116759.0 36 148530.0 37 234892.0 38 468399.0 39 133211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.06062998828382 0.8335576684191331 0.0759163771071639 0.029895966189876756 8 99.33924378430338 0.45051560161133725 0.05674697286041421 0.1534936412248765 9 97.57441292834449 1.1360467152153169 0.4996501756734032 0.78989018076679 10 52.61440916366726 29.88212546478885 8.203605370478147 9.299860001065737 11 35.91017646232451 24.030405304873113 22.356092790989134 17.703325441813245 12 32.65885173192453 17.617443742642788 24.35995296921615 25.363751556216528 13 27.577575534027076 18.612245858336028 26.65654448305238 27.15363412458452 14 26.5800744769417 19.686770550535602 27.574668981758617 26.158485990764085 15 27.777435604296436 20.900671344370387 26.541943279324514 24.779949772008656 16 32.42847286283634 20.804547508634883 24.43552332819612 22.33145630033266 17 30.898519111619223 22.061977382871135 22.82605461134898 24.213448894160667 18 29.701504002391676 21.4722932905009 23.891582832241415 24.934619874866005 19 27.85563570104311 23.274701715073448 23.466464961166388 25.403197622717062 20 28.609055571203264 23.376915469847635 24.006184035969277 24.007844922979828 21 29.091335636891348 22.417822424881194 26.299038554031767 22.19180338419569 22 27.873628643657383 21.52807141260516 26.63142356701783 23.966876376719622 23 27.917503742186046 22.48744127207336 26.46671893847175 23.128336047268842 24 28.282345255503245 22.739965301302203 24.59081626368242 24.38687317951213 25 27.752314688261887 23.14764385876647 23.900856118050314 25.199185334921324 26 25.640496854349205 22.437199440004264 24.944515993303856 26.97778771234268 27 25.122922939686966 21.819972304709097 24.491924282929332 28.5651804726746 28 25.707970389152745 23.900510099923114 24.24528256186285 26.146236949061286 29 27.579374828288504 23.20127666848211 23.27878472897438 25.940563774255004 30 27.571554818613837 21.22537475493266 24.343620913612423 26.859449512841078 31 28.77424462512742 22.572492527738543 23.52162025064169 25.13164259649234 32 30.175618040277897 22.403220459913452 24.24216839871807 23.17899310109058 33 30.509317922147304 21.511600949750555 25.40444328797497 22.574637840127167 34 26.22028482828158 23.365289260773796 27.527748923710615 22.886676987234004 35 25.790253499800347 25.53537654730656 27.009621380044855 21.664748572848232 36 25.46222831521698 26.842702235484712 24.30957272989617 23.385496719402134 37 27.350310828083664 26.8087232553939 22.689792672858548 23.151173243663887 38 27.250519200199857 26.444227760203905 23.479752057250774 22.825500982345464 39 28.020271125963745 24.775520739980525 22.87484316728385 24.32936496677188 40 27.24477529928838 24.768185155683938 22.470555587466116 25.51648395756157 41 24.521128212864816 25.31966884681155 24.275801360681683 25.88340157964196 42 23.61746727187544 23.786877746951408 24.656905725977172 27.938749255195983 43 23.14342243761466 23.60591026642704 25.5209129895897 27.729754306368605 44 24.712407033579677 23.494630836720273 25.194341081140557 26.59862104855949 45 26.165613964184352 23.781133846039925 23.465426906784792 26.587825282990924 46 24.881540694153887 25.689562224785835 22.888337874244556 26.54055920681573 47 24.638359154359378 23.71725889975924 25.94776095130072 25.696620994580666 48 26.201184627660272 23.157609180829766 25.08825192334176 25.5529542681682 49 26.483673826704436 23.02639910699642 24.373032454424223 26.116894611874926 50 24.460367429728908 22.941278647705797 26.2234681950518 26.37488572751349 51 24.442997319743586 23.239477069724728 25.839111259360653 26.478414351171033 52 24.052342854137443 24.18929682888227 26.06367702391193 25.69468329306836 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 15.0 4 30.0 5 21.5 6 13.0 7 33.0 8 53.0 9 506.5 10 960.0 11 1130.0 12 1300.0 13 1947.5 14 2378.0 15 2161.0 16 2291.5 17 2422.0 18 2604.0 19 2786.0 20 2545.0 21 2304.0 22 2796.0 23 3288.0 24 3938.0 25 4588.0 26 6503.0 27 8418.0 28 9939.0 29 11460.0 30 12252.5 31 13045.0 32 14727.5 33 16410.0 34 18361.0 35 20312.0 36 23225.5 37 26139.0 38 29334.5 39 34360.0 40 36190.0 41 41821.0 42 47452.0 43 53385.5 44 59319.0 45 65466.0 46 71613.0 47 73367.5 48 75122.0 49 83271.0 50 91420.0 51 95516.0 52 99612.0 53 104884.5 54 110157.0 55 119684.5 56 129212.0 57 129754.5 58 130297.0 59 122023.5 60 113750.0 61 108390.0 62 103030.0 63 92499.5 64 68591.5 65 55214.0 66 42627.0 67 30040.0 68 24812.5 69 19585.0 70 17848.5 71 16112.0 72 14605.0 73 13098.0 74 9659.0 75 6220.0 76 4568.0 77 2916.0 78 1915.5 79 915.0 80 764.0 81 613.0 82 434.0 83 255.0 84 151.5 85 48.0 86 33.5 87 19.0 88 14.5 89 8.0 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1445011.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 7.664430445837785 #Duplication Level Percentage of deduplicated Percentage of total 1 66.51999242278191 5.098378551820685 2 9.604566930821882 1.4722707040735603 3 4.065142865279463 0.9347101422998448 4 2.1843624360198195 0.6696757583749877 5 1.2151173372454007 0.46565911574244945 6 0.7714933490844402 0.35478342680904856 7 0.4887294484528993 0.2622083005149937 8 0.36406242082339063 0.22322648818753626 9 0.2728209314480882 0.18819153479272951 >10 6.0851713609251 13.759861230929754 >50 5.397698764231268 29.58082822750643 >100 2.92785635060645 38.45311030890716 >500 0.07769072698307766 4.076513811647805 >1k 0.02348789420418627 3.4166663929202494 >5k 0.0018067610926297132 1.0439160054727554 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 9601 0.664424007844923 No Hit ATCAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5476 0.37895905290686366 No Hit ATCAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4943 0.3420735205475945 No Hit ATCAACGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 3205 0.22179761953369215 No Hit ATCAACGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 3149 0.2179222165090785 No Hit ATCAACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 3097 0.21432362798622295 No Hit ATCAACGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTC 2807 0.19425457660875936 No Hit ATCAACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2670 0.18477367992354382 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 2400 0.16608870105487086 No Hit ATCAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2372 0.16415099954256404 No Hit ATCAACGGGGGGGTTGGATAGATGGCTCAGCAGTTAAGAGCACCGACTGCTC 2168 0.15003345995290002 No Hit ATCAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 2154 0.1490646091967466 No Hit ATCAACGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 1594 0.11031057895061007 No Hit ATCAACGGGACGTGGCTGACGATGACTGGTCTTCCTGGCCATATTACTTTCT 1564 0.10823447018742417 No Hit ATCAACGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTCT 1551 0.1073348230567103 No Hit ATCAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1457 0.10082968226539453 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.03356375833817182 0.0 0.0 0.0 0.0 8 0.03771597586454359 0.0 0.0 0.0 0.0 9 0.04207580426723395 0.0 0.0 0.0 0.0 10 0.052317940832284325 0.0 0.0 0.0 0.0 11 0.05875387799816057 0.0 0.0 0.0 0.0 12 0.06498220428771823 0.0 0.0 0.0 0.0 13 0.07460150822381283 0.0 0.0 0.0 0.0 14 0.08186788889496342 0.0 0.0 0.0 0.0 15 0.08920347319155356 0.0 0.0 0.0 0.0 16 0.10892650644181948 0.0 0.0 0.0 0.0 17 0.1181305886252769 0.0 0.0 0.0 0.0 18 0.12650422730345998 0.0 0.0 0.0 0.0 19 0.13750760374834517 0.0 0.0 0.0 0.0 20 0.1467116859318026 0.0 0.0 0.0 0.0 21 0.15695382249685297 0.0 0.0 0.0 0.0 22 0.16470462854608028 0.0 0.0 0.0 0.0 23 0.17446233973305394 0.0 0.0 0.0 0.0 24 0.18387403279282996 0.0 0.0 0.0 0.0 25 0.1924552823473316 0.0 0.0 0.0 0.0 26 0.2024898080360634 0.0 0.0 0.0 0.0 27 0.20934096695457682 0.0 0.0 0.0 0.0 28 0.22152080503193403 0.0 0.0 0.0 0.0 29 0.23100170171714957 0.0 0.0 0.0 0.0 30 0.2384064896391792 0.0 0.0 0.0 0.0 31 0.2470569428191204 0.0 0.0 0.0 0.0 32 0.25743748663504984 0.0 0.0 0.0 0.0 33 0.26553431081147477 0.0 0.0 0.0 0.0 34 0.2756380401256461 0.0 0.0 0.0 0.0 35 0.28774867457756376 0.0 0.0 0.0 0.0 36 0.2983368292698118 0.0 0.0 0.0 0.0 37 0.3102398528454109 0.0 0.0 0.0 0.0 38 0.31868269514903347 0.0 0.0 0.0 0.0 39 0.32802518458336993 0.0 0.0 0.0 0.0 40 0.3388901537773761 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCCG 35 1.0198164E-7 46.000004 37 TTTACGA 40 5.6134013E-9 46.000004 33 CGAAACG 20 6.311995E-4 46.000004 25 CGAAACA 40 5.6134013E-9 46.000004 24 GACCGTA 20 6.311995E-4 46.000004 23 ATTACGC 20 6.311995E-4 46.000004 36 TAACGGA 20 6.311995E-4 46.000004 12 TTATCGC 20 6.311995E-4 46.000004 37 AATGCGG 20 6.311995E-4 46.000004 19 TTAGTCG 20 6.311995E-4 46.000004 16 ATGCGCG 20 6.311995E-4 46.000004 37 TTACGCC 20 6.311995E-4 46.000004 37 ATACGCG 20 6.311995E-4 46.000004 40 CAATCTA 20 6.311995E-4 46.000004 14 GCGTATT 20 6.311995E-4 46.000004 13 TCGCGTA 20 6.311995E-4 46.000004 11 TCGGTAC 20 6.311995E-4 46.000004 14 CGCCCAT 35 1.0198164E-7 46.000004 11 CGCTTAT 20 6.311995E-4 46.000004 28 ACGCGGT 35 1.0198164E-7 46.000004 26 >>END_MODULE