##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527592_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2355878 Sequences flagged as poor quality 0 Sequence length 52 %GC 57 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.44814035361763 31.0 31.0 33.0 27.0 34.0 2 30.521830502258606 31.0 31.0 33.0 28.0 34.0 3 30.597213013577104 31.0 31.0 31.0 28.0 34.0 4 35.37386570951467 37.0 35.0 37.0 33.0 37.0 5 35.77415893352712 37.0 35.0 37.0 35.0 37.0 6 36.212628582634586 37.0 36.0 37.0 35.0 37.0 7 36.122613310196876 37.0 35.0 37.0 35.0 37.0 8 36.31387448755835 37.0 37.0 37.0 35.0 37.0 9 38.2190015781802 39.0 39.0 39.0 37.0 39.0 10 36.45641115541637 39.0 35.0 39.0 31.0 39.0 11 36.92971834704514 39.0 37.0 39.0 34.0 39.0 12 36.73721432094531 39.0 35.0 39.0 33.0 39.0 13 36.764599440208706 39.0 35.0 39.0 33.0 39.0 14 37.48342528772712 40.0 36.0 40.0 33.0 40.0 15 37.518225052400844 40.0 36.0 40.0 33.0 40.0 16 37.47112032117113 39.0 36.0 40.0 33.0 40.0 17 37.42491504228997 39.0 36.0 40.0 33.0 40.0 18 37.33414633525165 39.0 36.0 40.0 33.0 40.0 19 37.119323666166075 39.0 36.0 40.0 32.0 40.0 20 36.96792490952418 39.0 36.0 40.0 31.0 40.0 21 37.03648406241749 39.0 36.0 40.0 31.0 40.0 22 37.02773488270615 39.0 35.0 40.0 32.0 40.0 23 36.99103518942832 39.0 35.0 40.0 32.0 40.0 24 37.07605996575374 39.0 35.0 40.0 32.0 40.0 25 37.075487355457284 39.0 35.0 40.0 33.0 40.0 26 37.00374976972492 39.0 35.0 40.0 33.0 40.0 27 36.878400324634804 39.0 35.0 40.0 32.0 40.0 28 36.694118286261 38.0 35.0 40.0 31.0 40.0 29 36.658486560000135 38.0 35.0 40.0 31.0 40.0 30 36.56671652776587 38.0 35.0 40.0 31.0 40.0 31 36.46916308909035 38.0 35.0 40.0 31.0 40.0 32 36.368569594860176 38.0 35.0 40.0 31.0 40.0 33 36.14742698900368 38.0 35.0 40.0 31.0 40.0 34 35.718617432651435 38.0 34.0 40.0 29.0 40.0 35 35.59604317371273 38.0 34.0 40.0 29.0 40.0 36 35.655351847591426 38.0 34.0 40.0 29.0 40.0 37 35.66475768269834 38.0 34.0 40.0 30.0 40.0 38 35.65492440610252 38.0 34.0 40.0 30.0 40.0 39 35.53968923687899 37.0 34.0 40.0 30.0 40.0 40 35.81512370334966 38.0 35.0 40.0 30.0 40.0 41 35.931503244225716 38.0 35.0 40.0 31.0 40.0 42 35.90027072709198 38.0 35.0 40.0 31.0 40.0 43 35.897204354385075 37.0 35.0 40.0 31.0 40.0 44 35.762364180148545 37.0 35.0 40.0 31.0 40.0 45 35.64077172077671 37.0 34.0 40.0 30.0 40.0 46 35.284504545651345 37.0 34.0 40.0 30.0 40.0 47 35.266336372256966 36.0 34.0 40.0 30.0 40.0 48 35.160214153704054 36.0 34.0 40.0 29.0 40.0 49 35.06279187631957 36.0 34.0 40.0 29.0 40.0 50 34.89312052661471 35.0 34.0 39.0 29.0 40.0 51 34.78528005270222 35.0 34.0 39.0 29.0 40.0 52 34.298749341010016 35.0 33.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 13.0 12 36.0 13 59.0 14 91.0 15 175.0 16 283.0 17 500.0 18 770.0 19 1201.0 20 1970.0 21 2903.0 22 4476.0 23 6484.0 24 9092.0 25 12650.0 26 17040.0 27 21918.0 28 27522.0 29 34702.0 30 44369.0 31 58668.0 32 80940.0 33 122661.0 34 222237.0 35 200675.0 36 308278.0 37 463878.0 38 653591.0 39 58693.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 0.0 0.0 0.0 100.0 7 98.2963039682021 0.7036442464338136 0.3535412275168748 0.646510557847223 8 97.87663028391114 1.0871955169155618 0.4376712206659258 0.5985029785073761 9 92.11096669691725 4.618575325207842 1.5000776780461467 1.7703802998287685 10 46.84699292577969 37.69032182481436 6.28636117829531 9.176324071110644 11 36.74596052936528 19.644565635402174 24.487600801060157 19.1218730341724 12 30.863567638052565 16.68800336859549 26.777193046499015 25.67123594685293 13 27.894568394458457 16.76181873594473 28.413355869871022 26.930256999725792 14 25.966879439427675 18.473961724673348 31.487793510529833 24.07136532536914 15 29.135549463936588 18.17475268243941 29.7976380780329 22.892059775591093 16 34.600221233866954 19.757559601982784 24.331650450490223 21.310568713660043 17 31.72634576153774 20.824253208357987 22.597222776391646 24.85217825371263 18 30.80401446934009 21.286501253460493 22.6296522994824 25.27983197771701 19 31.81442332752375 23.414243012583842 22.361726710805907 22.4096069490865 20 32.06524276724007 24.547408651891143 22.55961471689111 20.827733863977677 21 31.03225209454819 23.277351373882688 25.146972805892325 20.543423725676796 22 29.583323075303557 21.12227373403886 26.404508213073854 22.88989497758373 23 29.2004085101181 22.830087126752744 25.876000370138012 22.09350399299115 24 29.89170067380399 21.466009699992956 23.335079320745812 25.307210305457247 25 27.368946948865773 21.166418634581248 23.543961104946863 27.92067331160612 26 25.48833173874029 22.47140980984584 24.943099770022048 27.097158681391818 27 23.40830042981852 22.062729903670732 24.43012753631555 30.098842130195198 28 25.61936568871563 25.63850929462392 23.10544094388589 25.636684072774568 29 28.667740859246532 23.515394260653565 23.245813238206733 24.57105164189317 30 28.28945301921407 21.864926791625034 24.590747059058238 25.254873130102663 31 31.386175345242833 21.565165938134317 24.199767560119838 22.848891156503008 32 32.75606801370869 20.734350420522624 23.5780036147882 22.931577950980483 33 32.169619988810965 20.845137142076116 24.558572218086 22.42667065102692 34 27.532367974912113 23.743929014999928 27.28367088618341 21.440032123904547 35 25.80226989682827 27.77109001399903 25.909703303821335 20.516936785351366 36 26.836788662231235 27.44963873341489 23.50919699576973 22.204375608584144 37 28.272771340451413 28.428933926120116 21.710462086746425 21.587832646682042 38 28.957059745878183 26.586648374830958 21.355987024795002 23.100304854495864 39 28.373837694481637 24.37363055302524 21.59407235858563 25.658459393907496 40 25.928252651453086 24.91593367738058 21.93212042389292 27.223693247273417 41 24.21169517267023 25.321430057074263 22.4124508994099 28.054423870845604 42 22.693110594012083 23.846693249820238 24.03286587845381 29.42733027771387 43 23.97781209383508 21.883858162434557 24.370574367603076 29.767755376127287 44 25.81330612196387 21.319397693768522 23.474730015730866 29.392566168536742 45 26.509946610138556 23.50936678384874 22.673415176847016 27.307271429165684 46 25.43820180841283 24.647753406585572 23.36725416171805 26.54679062328355 47 24.97951931296952 23.747027647441847 25.094720524577248 26.178732515011387 48 26.669420063347932 22.362618098220704 25.882706999258875 25.08525483917249 49 27.156542062025284 21.95656990727024 25.397749798588894 25.489138232115582 50 25.315147898150926 21.934242774880534 26.417030083900777 26.333579243067767 51 24.011727262617164 22.288420707693692 26.563005384828926 27.136846644860217 52 23.512974780527685 22.469924164154513 27.710305881713737 26.306795173604065 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 7.5 8 15.0 9 60.0 10 105.0 11 175.0 12 245.0 13 572.0 14 1890.5 15 2882.0 16 3126.5 17 3371.0 18 3242.5 19 3114.0 20 3213.5 21 3313.0 22 3691.5 23 4070.0 24 3931.5 25 3793.0 26 5266.5 27 6740.0 28 8251.5 29 9763.0 30 11446.5 31 13130.0 32 17421.5 33 21713.0 34 24220.0 35 26727.0 36 28741.0 37 30755.0 38 34570.0 39 45314.5 40 52244.0 41 56019.5 42 59795.0 43 63151.0 44 66507.0 45 72567.0 46 78627.0 47 83635.0 48 88643.0 49 94142.5 50 99642.0 51 104570.5 52 109499.0 53 113666.5 54 117834.0 55 128282.0 56 138730.0 57 143945.5 58 149161.0 59 164117.0 60 179073.0 61 195249.0 62 211425.0 63 210782.5 64 210673.0 65 211206.0 66 180083.5 67 148961.0 68 121448.5 69 93936.0 70 74972.0 71 56008.0 72 47808.0 73 39608.0 74 34314.0 75 29020.0 76 27861.5 77 26703.0 78 19711.5 79 12720.0 80 8868.5 81 5017.0 82 3090.0 83 1163.0 84 889.5 85 616.0 86 472.0 87 328.0 88 239.5 89 88.0 90 25.0 91 24.0 92 23.0 93 24.5 94 26.0 95 26.5 96 27.0 97 13.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2355878.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.054693632347119 #Duplication Level Percentage of deduplicated Percentage of total 1 69.555573268539 6.993599796374326 2 9.171160839445799 1.8442642498721387 3 3.310797287164504 0.9986715720373515 4 1.5176365227034523 0.610374811241753 5 0.8614733211200151 0.43309251581511704 6 0.5571475937045519 0.3361169017619206 7 0.4420031464538503 0.31109443554888433 8 0.37217730573417723 0.2993703028855631 9 0.3470851011095442 0.3140850920407821 >10 9.308413788869895 25.55195188300065 >50 2.873408241958949 19.776734191958553 >100 1.5931305946369503 30.434523905910503 >500 0.06537226527420469 4.314564478733531 >1k 0.02249824713982369 4.398135237083865 >5k 4.244952290532772E-4 0.38016585527396757 >10k+ 0.0016979809162131088 3.003254770461149 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 28743 1.2200546887402488 No Hit GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 17307 0.7346305708529899 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 13216 0.5609798130463463 No Hit GTTGCCGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 11098 0.47107702521098294 No Hit GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 8907 0.37807560493370196 No Hit GTTGCCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4994 0.21198041664296707 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 4754 0.20179313190241602 No Hit GTTGCCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4483 0.19028998954954374 No Hit GTTGCCGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 4446 0.18871944981870878 No Hit GTTGCCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4086 0.17343852270788215 No Hit GTTGCCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4053 0.1720377710560564 No Hit GTTGCCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3312 0.14058452941960492 No Hit GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3256 0.13820749631347634 No Hit GTTGCCGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCT 3039 0.12899649302722807 No Hit GTTGCCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 2713 0.11515876458797951 No Hit GTTGCCGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 2663 0.11303641360036469 No Hit GTTGCCGGGGGCAGTGGTGGCGCACGCCTTTCGTCCCAGCACTTGGGAGGCA 2495 0.10590531428197895 No Hit GTTGCCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGTTGCCGGGAAG 2493 0.10582042024247434 No Hit GTTGCCGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 2435 0.10335849309684117 No Hit GTTGCCGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 2358 0.10009007257591436 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0032684205209268053 0.0 0.0 0.0 0.0 8 0.006069923824578352 0.0 0.0 0.0 0.0 9 0.006918864219624276 0.0 0.0 0.0 0.0 10 0.011885165530642929 0.0 0.0 0.0 0.0 11 0.01961052312556083 0.0 0.0 0.0 0.0 12 0.0288215264118091 0.0 0.0 0.0 0.0 13 0.03726848334251604 0.0 0.0 0.0 0.0 14 0.050087483307709485 0.0 0.0 0.0 0.0 15 0.06052945016677434 0.0 0.0 0.0 0.0 16 0.06918864219624275 0.0 0.0 0.0 0.0 17 0.07814496336397725 0.0 0.0 0.0 0.0 18 0.08790777790700537 0.0 0.0 0.0 0.0 19 0.09958070833888683 0.0 0.0 0.0 0.0 20 0.10947086394117182 0.0 0.0 0.0 0.0 21 0.11804516193113565 0.0 0.0 0.0 0.0 22 0.1242424268149709 0.0 0.0 0.0 0.0 23 0.13362321818022835 0.0 0.0 0.0 0.0 24 0.1442774201380547 0.0 0.0 0.0 0.0 25 0.1528517181280185 0.0 0.0 0.0 0.0 26 0.16112888697971628 0.0 0.0 0.0 0.0 27 0.1729291584708546 0.0 0.0 0.0 0.0 28 0.2073536914899668 0.0 0.0 0.0 0.0 29 0.21584309544042604 0.0 0.0 0.0 0.0 30 0.23095423447224347 0.0 0.0 0.0 0.0 31 0.2396558735214642 0.0 0.0 0.0 0.0 32 0.24691431389910684 0.0 0.0 0.0 0.0 33 0.25336626090145586 0.0 0.0 0.0 0.0 34 0.26457227411606205 0.0 0.0 0.0 0.0 35 0.29785073760186226 0.0 0.0 0.0 0.0 36 0.3117733600806154 0.0 0.0 0.0 0.0 37 0.32217287991992793 0.0 0.0 0.0 0.0 38 0.33108675406791016 0.0 0.0 0.0 0.0 39 0.3378782772282775 0.0 0.0 0.0 0.0 40 0.3453065056849294 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTAC 20 6.3128094E-4 46.0 19 TGCCGGA 10570 0.0 44.67266 3 CGGGATA 3565 0.0 43.935482 6 GTTGCCG 243050 0.0 43.845257 1 TGCCGGT 3180 0.0 43.83019 3 TTGCCGG 239850 0.0 43.784866 2 CGGGATT 9250 0.0 43.76216 6 TGCCGGG 223830 0.0 43.56364 3 CCGGGAT 27720 0.0 43.544014 5 GCCGGAT 3040 0.0 43.42763 4 CCGGGGG 47970 0.0 43.3965 5 GCCGGGA 85810 0.0 43.351826 4 GCCGGGG 109330 0.0 43.340897 4 CGGGGGG 26595 0.0 42.981766 6 CCGGGGC 24035 0.0 42.822964 5 CGGGAGT 7085 0.0 42.753704 6 CCGGGAC 13375 0.0 42.543552 5 GCCGGGT 10850 0.0 42.41751 4 CGGGATC 8715 0.0 42.410786 6 CGGGGCT 14600 0.0 42.250687 6 >>END_MODULE