##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527591_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 743964 Sequences flagged as poor quality 0 Sequence length 50 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58204966907001 31.0 31.0 33.0 30.0 34.0 2 30.866727422294627 31.0 31.0 33.0 28.0 34.0 3 32.136434021001016 33.0 31.0 34.0 30.0 34.0 4 35.43868386104704 35.0 35.0 37.0 33.0 37.0 5 35.78091009780043 37.0 35.0 37.0 35.0 37.0 6 35.975216542735936 37.0 35.0 37.0 35.0 37.0 7 36.54473469146357 37.0 37.0 37.0 35.0 37.0 8 36.70448704507207 37.0 37.0 37.0 35.0 37.0 9 38.66271083009393 39.0 39.0 39.0 39.0 39.0 10 37.30506449236791 39.0 37.0 39.0 34.0 39.0 11 36.20265631132689 37.0 35.0 39.0 33.0 39.0 12 36.117125291008705 37.0 35.0 39.0 33.0 39.0 13 36.20878429601432 38.0 35.0 39.0 33.0 39.0 14 36.93794457796345 39.0 35.0 40.0 33.0 40.0 15 37.058025657155454 39.0 35.0 40.0 33.0 40.0 16 37.18935996903076 39.0 35.0 40.0 33.0 40.0 17 37.10690839879349 39.0 35.0 40.0 33.0 40.0 18 36.983582538940055 38.0 35.0 40.0 33.0 40.0 19 36.88308305240576 38.0 35.0 40.0 33.0 40.0 20 36.72036550155653 38.0 35.0 40.0 33.0 40.0 21 36.596331274093906 38.0 35.0 40.0 33.0 40.0 22 36.43723083375002 38.0 35.0 40.0 32.0 40.0 23 36.23130957949578 38.0 35.0 40.0 32.0 40.0 24 36.089246253850995 38.0 34.0 40.0 32.0 40.0 25 35.87584883139507 37.0 34.0 39.0 31.0 40.0 26 35.343422531197746 36.0 34.0 39.0 30.0 40.0 27 35.24813700662936 36.0 34.0 38.0 30.0 40.0 28 35.0600889290342 36.0 34.0 38.0 30.0 40.0 29 34.7456731777344 36.0 33.0 38.0 30.0 40.0 30 34.42404471184089 35.0 33.0 38.0 29.0 39.0 31 34.2453142894011 35.0 33.0 38.0 29.0 39.0 32 34.16665994591136 35.0 33.0 38.0 29.0 39.0 33 33.54010274690711 35.0 32.0 38.0 27.0 39.0 34 33.05238828760531 34.0 31.0 37.0 25.0 38.0 35 32.925418434225314 34.0 31.0 37.0 25.0 38.0 36 32.67405008844514 34.0 31.0 37.0 25.0 38.0 37 32.52364227301321 34.0 31.0 36.0 25.0 38.0 38 32.06270195869693 33.0 30.0 36.0 24.0 38.0 39 31.334629094956206 33.0 29.0 35.0 23.0 38.0 40 31.027198896720808 33.0 29.0 35.0 23.0 38.0 41 30.809317386325144 32.0 29.0 35.0 23.0 37.0 42 30.39113720556371 32.0 28.0 34.0 22.0 37.0 43 29.849543795129872 31.0 27.0 34.0 21.0 37.0 44 29.28086170836223 31.0 26.0 34.0 20.0 36.0 45 28.90425477576872 31.0 26.0 34.0 20.0 36.0 46 28.72069481856649 30.0 26.0 33.0 20.0 36.0 47 28.279165389723158 30.0 24.0 33.0 20.0 35.0 48 27.890232591899608 30.0 24.0 33.0 18.0 35.0 49 27.386784844427957 29.0 24.0 32.0 18.0 34.0 50 31.16183713190423 33.0 29.0 35.0 24.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 14.0 15 49.0 16 118.0 17 196.0 18 333.0 19 539.0 20 856.0 21 1304.0 22 2002.0 23 2868.0 24 3829.0 25 5152.0 26 6934.0 27 9482.0 28 13102.0 29 18622.0 30 27560.0 31 46288.0 32 76738.0 33 89926.0 34 93761.0 35 174470.0 36 152454.0 37 16983.0 38 378.0 39 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.82292691581851 1.0694065841895575 0.035082342694001324 0.07258415729793377 8 99.44849481964181 0.41346086638600793 0.09140227215295363 0.04664204181922781 9 97.86185890715143 1.180567876940282 0.4169556591447974 0.5406175567634993 10 58.65969321096182 31.041152528885807 3.555279556537682 6.743874703614691 11 39.541563839110495 24.718669182917452 20.46147394228753 15.278293035684523 12 32.749434112403286 17.57087708545037 25.21882779274266 24.460861009403683 13 25.835793129775098 16.877563968148994 28.310912893634637 28.975730008441268 14 24.30682129780473 18.877526331919288 29.180981875467094 27.634670494808887 15 26.174519197165452 19.7080772725562 27.133839809453146 26.9835637208252 16 32.57845809743482 22.050260496475634 22.780403352850406 22.590878053239134 17 31.964046647418424 22.02687226801297 22.592356619406313 23.416724465162293 18 32.52052518670258 21.703603937824948 21.900253238059904 23.875617637412564 19 30.076724142566036 23.855052126178148 20.939050814286713 25.1291729169691 20 31.455151055696245 22.6510960207752 22.492889440886923 23.400863482641636 21 30.691270007688544 23.263087998881666 24.035840443892447 22.009801549537343 22 30.69624336661451 20.295874531563353 25.563736955013955 23.44414514680818 23 30.302541520826274 20.709335397949364 24.261523407046578 24.72659967417778 24 29.951718093886264 20.913108698808006 24.270663634261876 24.864509573043858 25 28.816985768128568 22.31384851955202 22.05469619497718 26.81446951734224 26 25.880015699684396 23.156227989526375 24.271873370216838 26.69188294057239 27 25.693447532407482 20.820631105806196 24.12939335774312 29.35652800404321 28 27.88132221451576 23.46887752633192 22.44167728546005 26.208122973692277 29 30.438031947782417 21.697555258050123 21.911812937185132 25.952599856982328 30 27.673919705792215 21.49942739164798 23.80935099010167 27.01730191245813 31 31.836621126828717 22.398933281717934 21.886408482130857 23.878037109322495 32 33.44758617352453 21.189331741858478 21.9628906775059 23.400191407111095 33 33.05912651687447 19.96548220075165 23.284863246071048 23.690528036302833 34 29.024388276852104 22.091391518944466 27.492593727653485 21.39162647654994 35 27.047948556650592 26.452489636595317 24.629014307143894 21.870547499610197 36 27.986703657703867 27.420412815673878 22.20994564253109 22.382937884091167 37 31.19680522175804 26.033920996177233 20.81740514325962 21.951868638805102 38 30.558467882854544 26.59550730949347 20.30111672070154 22.544908086950443 39 31.68997424606567 22.538321746751187 21.42980036668441 24.34190364049873 40 28.541434800608634 23.213219994515864 21.36675968192009 26.87858552295541 41 26.14239398680581 24.93561516417461 21.41501470501261 27.506976144006966 42 24.65253695071267 21.75266545155411 23.91997462242797 29.67482297530526 43 25.433623132302102 20.80463570817943 25.942921969342603 27.81881919017587 44 26.153550440612715 20.06508379437715 24.58425407681017 29.197111688199968 45 28.075955288159104 20.636347995333107 24.231414423278547 27.056282293229245 46 27.44151598733272 23.59200176352619 22.706206214279185 26.260276034861903 47 25.42421407487459 22.576898882203977 25.46023732331134 26.538649719610092 48 28.256609190767296 21.82524960885204 24.62430977843014 25.293831421950525 49 27.74999865584894 21.3595012661903 25.49693264727863 25.39356743068213 50 25.029033662919176 21.970955583872335 25.222994661031983 27.777016092176503 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 1.0 8 1.0 9 1.5 10 2.0 11 52.0 12 102.0 13 291.5 14 481.0 15 626.5 16 772.0 17 637.5 18 503.0 19 539.0 20 575.0 21 568.5 22 562.0 23 860.5 24 1159.0 25 1393.0 26 1627.0 27 2351.0 28 3075.0 29 4492.0 30 5909.0 31 6735.0 32 7561.0 33 7521.0 34 7481.0 35 10591.5 36 13702.0 37 12622.0 38 11542.0 39 13277.0 40 15012.0 41 18481.5 42 21951.0 43 22722.0 44 23493.0 45 23830.5 46 24168.0 47 24431.5 48 24695.0 49 28965.5 50 33236.0 51 35191.0 52 37146.0 53 38633.5 54 40121.0 55 43609.5 56 47098.0 57 55744.0 58 64390.0 59 67680.5 60 70971.0 61 70192.5 62 69414.0 63 68836.5 64 68259.0 65 59015.0 66 49771.0 67 41159.5 68 32548.0 69 26575.5 70 20603.0 71 18296.5 72 15990.0 73 13556.5 74 11123.0 75 11365.5 76 11608.0 77 8218.0 78 4828.0 79 3087.0 80 1346.0 81 1023.5 82 701.0 83 545.5 84 390.0 85 209.5 86 29.0 87 23.5 88 18.0 89 9.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 743964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.203633509148291 #Duplication Level Percentage of deduplicated Percentage of total 1 70.15752660435987 7.860192159835691 2 9.430000839821957 2.1130054680065165 3 3.127736919773008 1.051260544865074 4 1.4300968194742714 0.6408912259195337 5 0.7618384902400691 0.42676796189062915 6 0.4858969898381543 0.32662870784070197 7 0.4199109788724791 0.3293170099628477 8 0.35752420486856784 0.32044561295976687 9 0.34912598529111827 0.35203316289497877 >10 9.368813811471968 28.806501389852198 >50 2.733020599632878 20.632584372362103 >100 1.317320728005663 28.062917022866696 >500 0.03479262396371969 2.5112774274024012 >1k 0.025194658732348746 5.4612857611389805 >5k 0.0011997456539213686 1.1048921722018807 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 8220 1.1048921722018807 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3722 0.5002930249313139 No Hit CACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3197 0.42972509422498933 No Hit CACAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3161 0.42488615040512717 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 2765 0.37165776838664233 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 2709 0.36413052244463445 No Hit CACAAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2690 0.361576635428596 No Hit CACAAGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 2593 0.3485383701361894 No Hit CACAAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 2353 0.31627874467044104 No Hit CACAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1758 0.23630175653660662 No Hit CACAAGGGGGAAGATACTTTATGAACTTTACAGTTAAAAGATTAAAAATC 1715 0.23052190697399338 No Hit CACAAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1701 0.22864009548849137 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1695 0.22783360485184767 No Hit CACAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1424 0.1914071110967735 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 1334 0.17930975154711787 No Hit CACAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1288 0.17312665666618277 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCTCTGACTA 1202 0.1615669575409563 No Hit CACAAGGGGCTCTTCATCTCTAACCATGCCTACTAACCAGAGCTGAACTA 1146 0.15403971159894833 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1079 0.14503389948976025 No Hit CACAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1073 0.14422740885311655 No Hit CACAAGGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1019 0.13696899312332317 No Hit CACAAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1006 0.13522159674392847 No Hit CACAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCAACGACTGC 968 0.13011382271185165 No Hit CACAAGGGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATC 942 0.12661902995306223 No Hit CACAAGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 861 0.11573140635837219 No Hit CACAAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 850 0.11425284019119204 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 800 0.1075320848858278 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.05080891010855364 0.0 0.0 0.0 0.0 6 0.05080891010855364 0.0 0.0 0.0 0.0 7 0.05161540074519735 0.0 0.0 0.0 0.0 8 0.05242189138184106 0.0 0.0 0.0 0.0 9 0.05322838201848477 0.0 0.0 0.0 0.0 10 0.06720755305364239 0.0 0.0 0.0 0.0 11 0.0767510255872596 0.0 0.0 0.0 0.0 12 0.08333736578651656 0.0 0.0 0.0 0.0 13 0.09005812109188079 0.0 0.0 0.0 0.0 14 0.09691329150335232 0.0 0.0 0.0 0.0 15 0.10484378276368211 0.0 0.0 0.0 0.0 16 0.11398400997897748 0.0 0.0 0.0 0.0 17 0.12231774655762913 0.0 0.0 0.0 0.0 18 0.1278287659080278 0.0 0.0 0.0 0.0 19 0.1367001629111086 0.0 0.0 0.0 0.0 20 0.14395857864090197 0.0 0.0 0.0 0.0 21 0.15054491884015894 0.0 0.0 0.0 0.0 22 0.15659359861498676 0.0 0.0 0.0 0.0 23 0.16277669349592186 0.0 0.0 0.0 0.0 24 0.1677500524218914 0.0 0.0 0.0 0.0 25 0.1756805436822212 0.0 0.0 0.0 0.0 26 0.18280454430590728 0.0 0.0 0.0 0.0 27 0.19073503556623708 0.0 0.0 0.0 0.0 28 0.19732137576549402 0.0 0.0 0.0 0.0 29 0.20337005554032184 0.0 0.0 0.0 0.0 30 0.20928432020904236 0.0 0.0 0.0 0.0 31 0.22003752869762516 0.0 0.0 0.0 0.0 32 0.2275647746396331 0.0 0.0 0.0 0.0 33 0.2345543601572119 0.0 0.0 0.0 0.0 34 0.24342575716029272 0.0 0.0 0.0 0.0 35 0.2543133807549828 0.0 0.0 0.0 0.0 36 0.2654698345618874 0.0 0.0 0.0 0.0 37 0.2758197977321483 0.0 0.0 0.0 0.0 38 0.2849600249474437 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATCA 60 0.0 44.0 43 GCGGTAT 55 1.8189894E-12 44.0 13 TTAGACG 20 7.8546896E-4 44.0 20 ATAGCGT 40 8.305506E-9 44.0 15 TACGGTG 45 4.783942E-10 44.0 35 CCTAATA 20 7.8546896E-4 44.0 17 TCGATTG 20 7.8546896E-4 44.0 13 ACTTACG 20 7.8546896E-4 44.0 18 TCGGCAT 20 7.8546896E-4 44.0 21 CGTTAGT 20 7.8546896E-4 44.0 19 AAACGTA 20 7.8546896E-4 44.0 42 GTTCGAT 20 7.8546896E-4 44.0 11 GCGATTA 30 2.526509E-6 44.0 9 CATCGAA 20 7.8546896E-4 44.0 25 CACGTTA 20 7.8546896E-4 44.0 17 GATTCGT 45 4.783942E-10 44.0 9 TATACGT 50 2.7284841E-11 44.0 23 TATCGTA 20 7.8546896E-4 44.0 13 AGTCGAC 20 7.8546896E-4 44.0 11 GTACGAC 30 2.526509E-6 44.0 31 >>END_MODULE