##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527590_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 667916 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.163099850879455 33.0 31.0 34.0 31.0 34.0 2 31.811221770402266 31.0 31.0 34.0 30.0 34.0 3 32.6834302517083 34.0 31.0 34.0 31.0 34.0 4 36.02578917109337 37.0 35.0 37.0 35.0 37.0 5 36.21375142982052 37.0 35.0 37.0 35.0 37.0 6 36.37052413776583 37.0 37.0 37.0 35.0 37.0 7 36.6813611292438 37.0 37.0 37.0 35.0 37.0 8 36.75499164565604 37.0 37.0 37.0 35.0 37.0 9 38.74830218171147 39.0 39.0 39.0 39.0 39.0 10 37.713142071757524 39.0 37.0 39.0 35.0 39.0 11 36.687060947783856 37.0 35.0 39.0 34.0 39.0 12 36.563314847974894 39.0 35.0 39.0 33.0 39.0 13 36.74092700279676 39.0 35.0 39.0 33.0 39.0 14 37.423593685433495 40.0 35.0 40.0 33.0 40.0 15 37.58880607741093 40.0 35.0 40.0 34.0 40.0 16 37.71656465783123 40.0 35.0 40.0 34.0 40.0 17 37.608444774492604 40.0 35.0 40.0 34.0 40.0 18 37.53158481006594 40.0 35.0 40.0 34.0 40.0 19 37.378734751076486 40.0 35.0 40.0 33.0 40.0 20 37.316134064762636 40.0 35.0 40.0 33.0 40.0 21 37.277596284562726 40.0 35.0 40.0 33.0 40.0 22 37.331366519143124 39.0 35.0 40.0 33.0 40.0 23 37.25513088472203 39.0 35.0 40.0 33.0 40.0 24 37.235378400876755 39.0 35.0 40.0 33.0 40.0 25 37.26469645883614 39.0 35.0 40.0 34.0 40.0 26 37.22241569299133 39.0 35.0 40.0 34.0 40.0 27 37.22022529779194 39.0 35.0 40.0 33.0 40.0 28 37.08845723114883 39.0 35.0 40.0 33.0 40.0 29 37.05006168440343 39.0 35.0 40.0 33.0 40.0 30 36.872398624976796 39.0 35.0 40.0 33.0 40.0 31 36.82244174417142 39.0 35.0 40.0 33.0 40.0 32 36.74265925655322 39.0 35.0 40.0 33.0 40.0 33 36.61755669874655 38.0 35.0 40.0 33.0 40.0 34 36.177469921367354 38.0 35.0 40.0 31.0 40.0 35 36.141761838315 38.0 35.0 40.0 31.0 40.0 36 36.125827199827526 38.0 35.0 40.0 31.0 40.0 37 36.09534282754119 38.0 35.0 40.0 31.0 40.0 38 36.21611849394235 38.0 35.0 40.0 31.0 40.0 39 36.185292761365204 38.0 35.0 40.0 32.0 40.0 40 35.970563663694236 37.0 35.0 40.0 31.0 40.0 41 35.87914498230317 37.0 35.0 40.0 31.0 40.0 42 35.748959449990714 37.0 35.0 40.0 31.0 40.0 43 35.75689907114068 37.0 35.0 40.0 31.0 40.0 44 35.63901298965738 36.0 35.0 40.0 31.0 40.0 45 35.55399181933058 36.0 34.0 40.0 31.0 40.0 46 35.37832152546129 36.0 34.0 40.0 30.0 40.0 47 35.239673851202845 35.0 34.0 40.0 30.0 40.0 48 35.091998095568904 35.0 34.0 40.0 30.0 40.0 49 34.94472658238461 35.0 34.0 39.0 29.0 40.0 50 35.336724977392365 35.0 34.0 40.0 31.0 40.0 51 35.43874828571258 35.0 35.0 40.0 31.0 40.0 52 35.19239545092497 35.0 34.0 39.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 6.0 15 14.0 16 29.0 17 72.0 18 135.0 19 248.0 20 337.0 21 571.0 22 783.0 23 1320.0 24 1742.0 25 2277.0 26 3003.0 27 3980.0 28 5097.0 29 7093.0 30 9603.0 31 13670.0 32 19837.0 33 36415.0 34 90029.0 35 54051.0 36 58223.0 37 100486.0 38 204165.0 39 54724.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.79146479497422 1.103881326394337 0.036830978745830315 0.06782289988561435 8 99.46130950598578 0.39675647835955413 0.0988148210253984 0.04311919462926476 9 97.86844453494152 1.191167751633439 0.39406152869522515 0.5463261847298163 10 58.911899101084565 30.90583246995131 3.476035908707083 6.706232520257038 11 39.64121236802233 24.69472209080184 20.342378382910425 15.32168715826541 12 32.951448984602855 17.40054138544368 25.284766347864103 24.363243282089364 13 25.885141245306297 16.913803532180694 28.1487492439169 29.05230597859611 14 24.445588966277196 18.818534067158147 29.15336659100845 27.582510375556208 15 26.229945082914618 19.82375029195288 27.079003946604065 26.867300678528437 16 32.7141436947161 22.031812383593145 22.77307326070943 22.48097066098132 17 32.07888417106343 21.784625611603854 22.64236820198947 23.494122015343248 18 32.68869139233077 21.539984069853098 21.803490259254158 23.967834278561977 19 30.11890716796723 23.78308050712964 20.87927224381509 25.218740081088043 20 31.620892447553285 22.544301978093053 22.47108917887878 23.363716395474878 21 30.85268207379371 23.108744213344192 24.045987818827516 21.99258589403458 22 30.667628863509783 20.199695770126784 25.519077249234932 23.6135981171285 23 30.38256307679409 20.52683271549117 24.306200180861065 24.784404026853675 24 30.021739260625584 20.830463711005574 24.257541367477348 24.890255660891487 25 28.95513807125447 22.278699716730845 22.03585480808964 26.730307403925046 26 25.942184346534596 22.99974847136466 24.43181477910396 26.626252402996787 27 25.893525533150875 20.628043047329307 24.05257547356254 29.425855945957274 28 27.87491241413591 23.336168021128405 22.50986651015996 26.279053054575723 29 30.471945573994336 21.46871762317417 21.872960072823528 26.186376730007964 30 27.70198647734146 21.22811850591991 23.935195443738433 27.134699573000198 31 32.037112451266324 22.116553578593713 21.940782972709144 23.905550997430815 32 33.604674839351055 21.00084441756149 21.99019038322184 23.404290359865612 33 33.201031267404886 19.90355074590218 23.167434228256248 23.72798375843669 34 29.11997915905593 22.08481306032495 27.25058240856635 21.54462537205277 35 27.21494918522688 26.24087460099773 24.673162493487204 21.87101372028818 36 28.28903634588781 27.03768138508435 22.141706442127454 22.531575826900387 37 31.369962689919088 25.804891633079606 20.881817474053623 21.943328202947676 38 30.559681157510827 26.46395654543386 20.334742692194826 22.64161960486049 39 31.821067319842616 22.3032537025614 21.427245342228662 24.448433635367323 40 28.743734242030435 22.982530737398115 21.31420717575264 26.95952784481881 41 26.223956305882773 24.887111552949772 21.447008306433744 27.44192383473371 42 25.069320094143578 21.589391480365794 23.96813371741357 29.373154708077067 43 25.587948185101123 20.596003090208946 25.950418914953378 27.865629809736554 44 26.350169781828853 19.836177004293955 24.60474071589841 29.20891249797879 45 28.247713784368095 20.412596793608778 24.32132184286647 27.01836757915666 46 27.553315087525977 23.523317303373478 22.711388857281452 26.211978751819093 47 25.57701866701801 22.39667862425814 25.484192623024455 26.5421100856994 48 28.402972828918603 21.627120775666402 24.813000437180722 25.156905958234272 49 27.944981105408463 21.0992100803095 25.503805867803734 25.4520029464783 50 25.268746369303923 21.798998676480277 25.180561627510045 27.75169332670575 51 24.385701195958774 22.587271453296523 24.569856089687924 28.45717126105678 52 25.245240419453946 21.81771360470478 25.29434839111505 27.64269758472622 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.5 6 1.0 7 2.0 8 3.0 9 3.0 10 3.0 11 36.0 12 69.0 13 163.5 14 441.5 15 625.0 16 619.0 17 613.0 18 558.5 19 504.0 20 496.5 21 489.0 22 579.0 23 669.0 24 890.0 25 1111.0 26 1614.5 27 2118.0 28 3183.0 29 4248.0 30 4843.5 31 5439.0 32 6256.0 33 7073.0 34 6903.0 35 6733.0 36 8868.0 37 11003.0 38 10990.5 39 12602.0 40 14226.0 41 16385.0 42 18544.0 43 19164.5 44 19785.0 45 20718.5 46 21652.0 47 22198.5 48 22745.0 49 25221.5 50 27698.0 51 28667.5 52 29637.0 53 32513.5 54 35390.0 55 38213.0 56 41036.0 57 46830.0 58 52624.0 59 58395.5 60 64167.0 61 61613.0 62 59059.0 63 59899.5 64 53922.0 65 47104.0 66 40866.5 67 34629.0 68 26825.0 69 19021.0 70 17370.0 71 15719.0 72 13919.5 73 12120.0 74 11308.5 75 10497.0 76 8502.5 77 6508.0 78 3961.0 79 1414.0 80 1099.5 81 785.0 82 678.0 83 571.0 84 408.0 85 245.0 86 150.0 87 55.0 88 31.5 89 4.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 667916.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.640882985285575 #Duplication Level Percentage of deduplicated Percentage of total 1 65.60651002438154 6.325046862180274 2 9.538303852903265 1.8391534264787786 3 3.233270697125464 0.9351475335221795 4 1.4597860015840232 0.5629450409931788 5 0.931778298883419 0.44915827738817454 6 0.6662214837016446 0.3853778019990538 7 0.569937726150358 0.38462920487007346 8 0.4457006196325688 0.3437558016277496 9 0.43482987281226215 0.37729295300606663 >10 12.478064385880453 32.322777115685206 >50 3.0515739288431973 19.91942100503656 >100 1.5141397356855557 27.341462100024554 >500 0.04037705961828149 2.5667898358476213 >1k 0.02795334896650257 5.115763060025512 >5k 0.0015529638314723648 1.1312799813150156 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 7556 1.1312799813150156 No Hit CACAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3426 0.5129387527772954 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3359 0.5029075512489595 No Hit CACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2875 0.43044334916366733 No Hit CACAAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2742 0.41053066553279155 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2365 0.35408644200767764 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2333 0.34929542038220374 No Hit CACAAGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2216 0.33177824756406493 No Hit CACAAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 1889 0.2828199953287539 No Hit CACAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1718 0.257217973517628 No Hit CACAAGGGGGAAGATACTTTATGAACTTTACAGTTAAAAGATTAAAAATCAT 1540 0.2305679157259296 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1513 0.22652549122943602 No Hit CACAAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1484 0.22218362788135035 No Hit CACAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1306 0.195533570089652 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 1159 0.17352481449763144 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCTCTGACTACT 1126 0.16858407344636153 No Hit CACAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1050 0.1572053970858611 No Hit CACAAGGGGCTCTTCATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAG 1045 0.1564567999568808 No Hit CACAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1023 0.15316297258936754 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 977 0.14627587900274885 No Hit CACAAGGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 973 0.14567700129956462 No Hit CACAAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 922 0.13804131058396565 No Hit CACAAGGGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATCCT 860 0.12875870618461005 No Hit CACAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCAACGACTGCTC 836 0.12516543996550467 No Hit CACAAGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 772 0.11558339671455692 No Hit CACAAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 762 0.11408620245659633 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 669 0.10016229585756292 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.06003748974421933 0.0 0.0 0.0 0.0 6 0.06003748974421933 0.0 0.0 0.0 0.0 7 0.06063636744740357 0.0 0.0 0.0 0.0 8 0.060935806298995684 0.0 0.0 0.0 0.0 9 0.06168440342797597 0.0 0.0 0.0 0.0 10 0.07695578485917391 0.0 0.0 0.0 0.0 11 0.08923277777445068 0.0 0.0 0.0 0.0 12 0.09611987136106935 0.0 0.0 0.0 0.0 13 0.10330640379928015 0.0 0.0 0.0 0.0 14 0.11109181394067517 0.0 0.0 0.0 0.0 15 0.11857778523047809 0.0 0.0 0.0 0.0 16 0.12801010905562976 0.0 0.0 0.0 0.0 17 0.13639439690020902 0.0 0.0 0.0 0.0 18 0.14298205163523556 0.0 0.0 0.0 0.0 19 0.15271381431197936 0.0 0.0 0.0 0.0 20 0.16229585756292708 0.0 0.0 0.0 0.0 21 0.16708687918840093 0.0 0.0 0.0 0.0 22 0.17217733966546692 0.0 0.0 0.0 0.0 23 0.17756723899412502 0.0 0.0 0.0 0.0 24 0.18445433258074367 0.0 0.0 0.0 0.0 25 0.1911917067415663 0.0 0.0 0.0 0.0 26 0.19747992262500075 0.0 0.0 0.0 0.0 27 0.2040675773600273 0.0 0.0 0.0 0.0 28 0.210954670946646 0.0 0.0 0.0 0.0 29 0.21679372855269224 0.0 0.0 0.0 0.0 30 0.2233813832877188 0.0 0.0 0.0 0.0 31 0.23206510998389018 0.0 0.0 0.0 0.0 32 0.24224603093802213 0.0 0.0 0.0 0.0 33 0.2501811605052132 0.0 0.0 0.0 0.0 34 0.2567688152402398 0.0 0.0 0.0 0.0 35 0.2656022613622072 0.0 0.0 0.0 0.0 36 0.2754837434647471 0.0 0.0 0.0 0.0 37 0.2867127003994514 0.0 0.0 0.0 0.0 38 0.29374951341186617 0.0 0.0 0.0 0.0 39 0.3018343624048533 0.0 0.0 0.0 0.0 40 0.31036836967522863 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACC 20 6.309546E-4 46.0 13 AACGTAA 30 1.8602241E-6 46.0 43 GATACGC 30 1.8602241E-6 46.0 32 CGAACGC 20 6.309546E-4 46.0 45 CATATCG 20 6.309546E-4 46.0 33 AATCACG 20 6.309546E-4 46.0 14 ACGCATC 25 3.4156074E-5 46.0 23 ACGTTGC 20 6.309546E-4 46.0 17 ATAGCCG 25 3.4156074E-5 46.0 39 GTAGGTA 45 3.092282E-10 46.0 29 TACGGTG 25 3.4156074E-5 46.0 35 TAAGTCC 25 3.4156074E-5 46.0 30 TCGATAT 20 6.309546E-4 46.0 38 TTATCCG 20 6.309546E-4 46.0 25 CGTTAGT 25 3.4156074E-5 46.0 19 TTATACG 25 3.4156074E-5 46.0 22 ACGATTA 25 3.4156074E-5 46.0 32 CTAACTT 20 6.309546E-4 46.0 22 TACGCTC 30 1.8602241E-6 46.0 34 ATATCGC 20 6.309546E-4 46.0 34 >>END_MODULE