##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527589_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 789185 Sequences flagged as poor quality 0 Sequence length 52 %GC 56 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.133337557100045 31.0 31.0 33.0 30.0 34.0 2 30.643423278445486 31.0 31.0 33.0 28.0 34.0 3 31.898343227506857 31.0 31.0 34.0 30.0 34.0 4 35.263347630783656 35.0 35.0 37.0 33.0 37.0 5 35.58611605643797 37.0 35.0 37.0 35.0 37.0 6 35.8325297617162 37.0 35.0 37.0 35.0 37.0 7 36.46553976570766 37.0 37.0 37.0 35.0 37.0 8 36.60635085562954 37.0 37.0 37.0 35.0 37.0 9 38.64591699031279 39.0 39.0 39.0 38.0 39.0 10 37.10797975126238 39.0 37.0 39.0 34.0 39.0 11 35.988622439605415 37.0 35.0 39.0 32.0 39.0 12 35.82381444148077 38.0 35.0 39.0 31.0 39.0 13 35.99331082065675 38.0 35.0 39.0 32.0 39.0 14 36.75178570297205 39.0 35.0 40.0 32.0 40.0 15 36.95933272933469 39.0 35.0 40.0 33.0 40.0 16 37.04880731387444 39.0 35.0 40.0 33.0 40.0 17 36.96105475902355 39.0 35.0 40.0 33.0 40.0 18 36.93057394653979 39.0 35.0 40.0 33.0 40.0 19 36.744759467045114 39.0 35.0 40.0 32.0 40.0 20 36.62757401623193 39.0 35.0 40.0 31.0 40.0 21 36.64887954028523 39.0 35.0 40.0 31.0 40.0 22 36.700212244277324 39.0 35.0 40.0 32.0 40.0 23 36.683593834145356 38.0 35.0 40.0 32.0 40.0 24 36.68806553596432 38.0 35.0 40.0 32.0 40.0 25 36.703542261953785 38.0 35.0 40.0 32.0 40.0 26 36.615929091404425 38.0 35.0 40.0 32.0 40.0 27 36.57730190006146 38.0 35.0 40.0 32.0 40.0 28 36.3888771327382 38.0 35.0 40.0 31.0 40.0 29 36.37637055950126 38.0 35.0 40.0 31.0 40.0 30 36.2520727079202 38.0 35.0 40.0 31.0 40.0 31 36.2014977476764 38.0 35.0 40.0 31.0 40.0 32 36.118382888676294 38.0 35.0 40.0 31.0 40.0 33 35.99153810576734 38.0 35.0 40.0 31.0 40.0 34 35.582046034833404 38.0 34.0 40.0 30.0 40.0 35 35.523766924105246 37.0 34.0 40.0 30.0 40.0 36 35.580208696313285 37.0 34.0 40.0 30.0 40.0 37 35.62990680258748 37.0 34.0 40.0 30.0 40.0 38 35.5749957234362 37.0 34.0 40.0 30.0 40.0 39 35.48217084713977 37.0 34.0 40.0 30.0 40.0 40 35.652033426889766 37.0 34.0 40.0 30.0 40.0 41 35.75272971483239 37.0 34.0 40.0 31.0 40.0 42 35.77940533588449 37.0 35.0 40.0 31.0 40.0 43 35.76479279256448 36.0 35.0 40.0 31.0 40.0 44 35.661483682533245 36.0 34.0 40.0 31.0 40.0 45 35.60695654377617 36.0 34.0 40.0 31.0 40.0 46 35.37593973529654 35.0 34.0 40.0 31.0 40.0 47 35.29603578375159 35.0 34.0 40.0 30.0 40.0 48 35.230327489752085 35.0 34.0 40.0 30.0 40.0 49 35.07617098652407 35.0 34.0 39.0 30.0 40.0 50 34.986108453657884 35.0 34.0 39.0 30.0 40.0 51 34.88181098221583 35.0 34.0 39.0 30.0 40.0 52 34.517729049589136 35.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 10.0 15 21.0 16 36.0 17 123.0 18 195.0 19 399.0 20 567.0 21 878.0 22 1431.0 23 2153.0 24 3007.0 25 3962.0 26 5405.0 27 6904.0 28 8949.0 29 11904.0 30 16033.0 31 22057.0 32 31459.0 33 52086.0 34 107169.0 35 61724.0 36 79610.0 37 127838.0 38 214766.0 39 30496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.83930890729043 1.0804817628312753 0.02660973029137655 0.05359959958691562 8 99.47236706222242 0.4222077206231746 0.07881548686302958 0.02660973029137655 9 97.96790359674854 1.1527081736221545 0.38216641218472225 0.4972218174445789 10 58.66153056634376 31.087007482402733 3.4393709966611126 6.812090954592397 11 39.11909121435405 24.997180635719126 20.48898547235439 15.394742677572431 12 32.44055576322409 17.49830521360644 25.413686271279868 24.647452751889606 13 25.506820327299685 16.956353706672072 28.343797715364584 29.193028250663662 14 24.243491703466233 18.87162072264425 29.081394096441265 27.803493477448253 15 26.083111057610065 19.78737558367176 27.023448240906756 27.10606511781141 16 32.38302806059416 22.07302470269962 22.76753866330455 22.776408573401675 17 31.8662924409359 21.992435233817165 22.464694589988408 23.676577735258526 18 32.30877424178108 21.527651944727786 21.825300784987043 24.33827302850409 19 29.85725780393697 23.70090663152493 20.935522089243968 25.506313475294135 20 31.387697434695287 22.361423493857586 22.652229832041918 23.59864923940521 21 30.677217635915532 23.0195708230643 24.059884564455736 22.243326976564433 22 30.67747106191831 20.11454855325431 25.531149223566086 23.6768311612613 23 30.349791240330216 20.6288766258862 24.222710771238685 24.798621362544903 24 29.788959496189104 20.785113756596996 24.31533797525295 25.110588771960945 25 28.65817267180699 22.3856256771226 22.01004834101003 26.946153310060378 26 25.91724373879382 23.011334477974113 24.327375710384764 26.744046072847304 27 25.783941661334158 20.96124482852563 23.828126484917984 29.426687025222225 28 28.041333781052607 23.314178551290254 22.468242554027256 26.176245113629882 29 30.382863333692356 21.51688133960985 21.9160272939805 26.1842280327173 30 27.65219815379157 21.361531199908768 23.852455381184388 27.13381526511528 31 31.835627894600126 22.380177018062938 21.697574079588435 24.086621007748498 32 33.38380734555269 21.190468648035633 21.87991408858506 23.545809917826617 33 32.975411342080754 19.95717100553102 23.29213048904883 23.775287163339396 34 29.169079493401423 22.080374056780098 27.196284774799317 21.554261675019166 35 27.168027775489907 26.36111938265426 24.607411443451156 21.863441398404685 36 28.179957804570538 27.22048695806433 22.060986967567807 22.538568269797324 37 31.107281562624735 25.774691612232875 20.955035891457644 22.16299093368475 38 30.564443064680653 26.38633526993037 20.390782896279074 22.658438769109903 39 31.647459087539676 22.268036011834994 21.612042803651867 24.47246209697346 40 28.53665490347637 23.09433149388293 21.461887897007674 26.907125705633028 41 26.159012145441185 24.79431312049773 21.464548870036808 27.582125864024277 42 24.71486406862776 21.737488675025503 23.981575929598257 29.56607132674848 43 25.532162927577183 20.554242668068955 26.053840354289555 27.859754050064307 44 26.192844516811647 19.986695134854312 24.690915311365522 29.12954503696852 45 28.037278965008205 20.630523894904236 24.248560223521736 27.083636916565823 46 27.655365978826257 23.58344367923871 22.562390314058174 26.19880002787686 47 25.578920025089175 22.430862218617943 25.45486799673081 26.53534975956208 48 28.298054321863695 21.73089959895335 24.694970127409924 25.27607595177303 49 27.726958824610197 21.16575961276507 25.611992118451315 25.49528944417342 50 25.1952330568878 21.960376844466126 25.040516482193652 27.803873616452417 51 24.404670641231142 22.55453410797215 24.41240013431578 28.628395116480927 52 25.13479095522596 21.935667809195564 25.244904553431706 27.684636682146774 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.5 6 3.0 7 4.0 8 5.0 9 3.5 10 2.0 11 50.0 12 98.0 13 207.5 14 512.0 15 707.0 16 721.0 17 735.0 18 633.0 19 531.0 20 512.5 21 494.0 22 640.0 23 786.0 24 971.0 25 1156.0 26 1835.0 27 2514.0 28 3838.5 29 5163.0 30 5793.0 31 6423.0 32 7267.5 33 8112.0 34 8040.0 35 7968.0 36 10708.0 37 13448.0 38 13116.5 39 15130.5 40 17476.0 41 19889.5 42 22303.0 43 23131.5 44 23960.0 45 24753.5 46 25547.0 47 26328.0 48 27109.0 49 29846.5 50 32584.0 51 33957.0 52 35330.0 53 38993.0 54 42656.0 55 45887.0 56 49118.0 57 55112.5 58 61107.0 59 68183.0 60 75259.0 61 72185.5 62 69112.0 63 70171.0 64 63474.0 65 55718.0 66 48087.5 67 40457.0 68 31231.5 69 22006.0 70 20099.0 71 18192.0 72 16346.5 73 14501.0 74 13656.0 75 12811.0 76 10225.0 77 7639.0 78 4676.5 79 1714.0 80 1383.0 81 1052.0 82 902.0 83 752.0 84 490.5 85 229.0 86 138.5 87 48.0 88 37.0 89 13.0 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 789185.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.326330328123317 #Duplication Level Percentage of deduplicated Percentage of total 1 66.5321594521888 6.205008964944849 2 9.980707046004184 1.861667416385258 3 3.7268009021493977 1.042721288417798 4 1.627673161055406 0.6072087026489352 5 0.904866715578381 0.4219542946203995 6 0.586940572267058 0.32844009959641907 7 0.43205347680769546 0.2820631410885914 8 0.35732724654221354 0.2666041549193155 9 0.3940110323089046 0.3307209336213942 >10 10.176353903426536 26.614925524433435 >50 3.5053395288171516 22.201511686106553 >100 1.69424743892829 30.154146366187902 >500 0.05027037308768783 2.969392474514848 >1k 0.029890492106192764 5.662930745009092 >5k 0.0013586587320996713 1.050704207505211 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 8292 1.050704207505211 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 3879 0.49151973238214103 No Hit CACAAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3473 0.44007425381881304 No Hit CACAAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3469 0.43956740181326304 No Hit CACAAGGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTATCT 2883 0.36531358300018374 No Hit CACAAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2871 0.36379302698353366 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 2787 0.353149134866983 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2615 0.3313544986283318 No Hit CACAAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 2482 0.3145016694437933 No Hit CACAAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2119 0.2685048499401281 No Hit CACAAGGGGGAAGATACTTTATGAACTTTACAGTTAAAAGATTAAAAATCAT 1946 0.24658350070008933 No Hit CACAAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1910 0.24202183265013907 No Hit CACAAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1730 0.21921349240038773 No Hit CACAAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1666 0.2111038603115873 No Hit CACAAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1442 0.18272014800078562 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCT 1407 0.17828519295222287 No Hit CACAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCTCTGACTACT 1253 0.15877139073854674 No Hit CACAAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1183 0.14990148064142123 No Hit CACAAGGGGCTCTTCATCTCTAACCATGCCTACTAACCAGAGCTGAACTAAG 1183 0.14990148064142123 No Hit CACAAGGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1143 0.1448329605859209 No Hit CACAAGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 1134 0.14369254357343336 No Hit CACAAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1100 0.1393843015262581 No Hit CACAAGGGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATCCT 1016 0.1287404094097075 No Hit CACAAGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCAACGACTGCTC 955 0.12101091632506954 No Hit CACAAGGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 937 0.1187300823000944 No Hit CACAAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 865 0.10960674620019387 No Hit CACAAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 837 0.10605878216134365 No Hit CACAAGGGGGAGACCGACCCTCGGCTCCGGAGCGGCAGTGCCGTCCCTCTCG 813 0.10301767012804348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.04637695850782769 0.0 0.0 0.0 0.0 6 0.04637695850782769 0.0 0.0 0.0 0.0 7 0.04675709751199022 0.0 0.0 0.0 0.0 8 0.04713723651615274 0.0 0.0 0.0 0.0 9 0.04789751452447778 0.0 0.0 0.0 0.0 10 0.060188675659066 0.0 0.0 0.0 0.0 11 0.068931872754804 0.0 0.0 0.0 0.0 12 0.07336682780336676 0.0 0.0 0.0 0.0 13 0.07995590387551715 0.0 0.0 0.0 0.0 14 0.08641826694628002 0.0 0.0 0.0 0.0 15 0.09364090802536794 0.0 0.0 0.0 0.0 16 0.10124368810861839 0.0 0.0 0.0 0.0 17 0.10884646819186883 0.0 0.0 0.0 0.0 18 0.11505540525985669 0.0 0.0 0.0 0.0 19 0.12443216736253224 0.0 0.0 0.0 0.0 20 0.13165480844162014 0.0 0.0 0.0 0.0 21 0.13811717151238304 0.0 0.0 0.0 0.0 22 0.1425521265609458 0.0 0.0 0.0 0.0 23 0.14800078562060862 0.0 0.0 0.0 0.0 24 0.15294259267472138 0.0 0.0 0.0 0.0 25 0.15927824274409677 0.0 0.0 0.0 0.0 26 0.16776801383705975 0.0 0.0 0.0 0.0 27 0.17461051591198515 0.0 0.0 0.0 0.0 28 0.18157973098829805 0.0 0.0 0.0 0.0 29 0.18905579807016099 0.0 0.0 0.0 0.0 30 0.19501130913537384 0.0 0.0 0.0 0.0 31 0.2043880712380494 0.0 0.0 0.0 0.0 32 0.2131312683337874 0.0 0.0 0.0 0.0 33 0.22060733541565034 0.0 0.0 0.0 0.0 34 0.2270696984864132 0.0 0.0 0.0 0.0 35 0.2374601646001888 0.0 0.0 0.0 0.0 36 0.2496246127333895 0.0 0.0 0.0 0.0 37 0.2578609578235775 0.0 0.0 0.0 0.0 38 0.266984293923478 0.0 0.0 0.0 0.0 39 0.27319323099146586 0.0 0.0 0.0 0.0 40 0.28244328009275393 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGGTA 70 0.0 46.000004 29 TCGTTTG 20 6.3102454E-4 46.0 35 TCGTTTA 20 6.3102454E-4 46.0 28 AATTTCG 20 6.3102454E-4 46.0 22 CGTATCA 30 1.860657E-6 46.0 43 ATAGGTG 20 6.3102454E-4 46.0 31 ATAGGCC 25 3.416176E-5 46.0 11 GCGAACC 20 6.3102454E-4 46.0 26 GACGTTA 25 3.416176E-5 46.0 10 GCTATAA 20 6.3102454E-4 46.0 22 ATAGCCG 30 1.860657E-6 46.0 39 TGTATCG 20 6.3102454E-4 46.0 26 ATATGTC 75 0.0 46.0 46 TACGGTG 20 6.3102454E-4 46.0 35 CGATTAC 30 1.860657E-6 46.0 10 GCGTTAG 20 6.3102454E-4 46.0 25 TTATCGC 20 6.3102454E-4 46.0 34 CGTTCAC 20 6.3102454E-4 46.0 44 TATGATC 20 6.3102454E-4 46.0 41 CGTTAGT 30 1.860657E-6 46.0 19 >>END_MODULE