##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527583_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2988820 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.534069632831685 31.0 30.0 33.0 28.0 33.0 2 29.30080499996654 31.0 30.0 31.0 25.0 33.0 3 31.16829250339599 31.0 31.0 33.0 30.0 34.0 4 35.17699961857857 35.0 35.0 37.0 33.0 37.0 5 35.545429969017874 37.0 35.0 37.0 33.0 37.0 6 33.32846909482672 35.0 33.0 35.0 28.0 36.0 7 35.31771836376898 35.0 35.0 37.0 33.0 37.0 8 36.23535977409145 37.0 35.0 37.0 35.0 37.0 9 38.48294042464919 39.0 39.0 39.0 37.0 39.0 10 36.14526535555838 39.0 35.0 39.0 31.0 39.0 11 36.482786852336375 38.0 35.0 39.0 32.0 39.0 12 36.68927235497621 39.0 35.0 39.0 32.0 39.0 13 36.669659932682464 39.0 35.0 39.0 33.0 39.0 14 37.52759818256034 40.0 37.0 40.0 33.0 40.0 15 37.73503924625772 40.0 37.0 40.0 33.0 40.0 16 37.60383629659866 40.0 37.0 40.0 33.0 40.0 17 37.798299328832115 40.0 37.0 40.0 33.0 40.0 18 37.757838210397416 40.0 37.0 40.0 33.0 40.0 19 37.48243119358141 40.0 37.0 40.0 32.0 40.0 20 37.576607490581566 40.0 37.0 40.0 33.0 40.0 21 37.6632011964588 40.0 37.0 40.0 33.0 40.0 22 37.67499280652565 40.0 37.0 40.0 33.0 40.0 23 37.506261668484555 40.0 37.0 40.0 33.0 40.0 24 37.34854725276196 39.0 37.0 40.0 33.0 40.0 25 36.86359901231924 38.0 36.0 40.0 32.0 40.0 26 36.32183403483649 38.0 35.0 40.0 31.0 40.0 27 35.96257252025883 38.0 35.0 40.0 31.0 40.0 28 35.748523832147804 38.0 35.0 40.0 30.0 40.0 29 35.691703080145345 38.0 35.0 40.0 30.0 40.0 30 35.304924016836075 37.0 35.0 40.0 29.0 40.0 31 35.0844182654024 37.0 34.0 40.0 28.0 40.0 32 34.62648403048695 37.0 34.0 40.0 25.0 40.0 33 34.447829243647995 36.0 34.0 40.0 25.0 40.0 34 33.959381294290054 36.0 33.0 40.0 22.0 40.0 35 33.64139325887808 36.0 33.0 40.0 21.0 40.0 36 33.14124069030587 36.0 33.0 40.0 17.0 40.0 37 32.33411915070162 35.0 31.0 40.0 12.0 40.0 38 31.78254193962835 35.0 30.0 40.0 10.0 40.0 39 31.09025468244993 35.0 28.0 39.0 9.0 40.0 40 30.641436419724172 35.0 25.0 40.0 9.0 40.0 41 30.377639670505417 35.0 24.0 40.0 8.0 40.0 42 30.13511017726059 35.0 23.0 40.0 8.0 40.0 43 29.996702377526915 35.0 23.0 39.0 8.0 40.0 44 29.768020489691583 35.0 23.0 39.0 8.0 40.0 45 29.52753628522293 35.0 23.0 39.0 8.0 40.0 46 29.19738525571965 35.0 20.0 39.0 8.0 40.0 47 29.154851078351992 35.0 22.0 38.0 8.0 40.0 48 29.031804859442857 35.0 21.0 38.0 8.0 40.0 49 28.86838284005059 35.0 20.0 38.0 8.0 40.0 50 28.467332258215617 35.0 18.0 37.0 8.0 40.0 51 28.28535442080821 34.0 18.0 37.0 8.0 40.0 52 27.745814067090024 34.0 15.0 37.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 1.0 13 24.0 14 29.0 15 130.0 16 363.0 17 993.0 18 2425.0 19 4725.0 20 8221.0 21 13566.0 22 21791.0 23 32977.0 24 48000.0 25 68462.0 26 99102.0 27 137292.0 28 158323.0 29 140051.0 30 99391.0 31 88565.0 32 101746.0 33 129683.0 34 187091.0 35 225928.0 36 370582.0 37 482421.0 38 528877.0 39 38056.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.50823401877665 0.22279695665848062 0.16340897076438193 0.1055600538004965 8 98.61751460442582 0.7037559973501248 0.32186615453590384 0.3568632436881445 9 96.53997229675926 1.8745859569997525 0.6585876700503878 0.9268540761906037 10 51.52364478289091 33.09095228217156 7.403691088790894 7.98171184614664 11 27.224824512683938 43.42660314103894 15.36452513031899 13.984047215958137 12 29.615266225466907 36.24898789488829 17.249884569830236 16.885861309814576 13 19.936597051679257 37.10711919754284 19.584183724680642 23.372100026097257 14 20.814669334386146 43.513025207272435 19.000575477947816 16.6717299803936 15 24.48166835072035 38.26503436138677 18.137124350077958 19.116172937814923 16 21.7268687977195 39.293466986971445 22.25741262438019 16.72225159092886 17 28.48953767707657 38.2969867706988 15.404172884282092 17.809302667942532 18 25.396410623590583 39.11587181563292 16.728909736953046 18.75880782382345 19 22.61169960051124 39.08515735306911 20.068153987192268 18.234989059227388 20 19.863491277494127 43.48415093582083 17.0704492073795 19.581908579305544 21 21.300513246030206 38.20678394818022 22.334499902971743 18.158202902817834 22 20.837956116460678 39.092718865639284 15.738920376603478 24.330404641296568 23 19.94556380109876 46.27063523397194 14.946400251604311 18.837400713324993 24 20.568853259814908 45.115028673523334 15.602344738057159 18.7137733286046 25 20.790077689522956 40.8762655496149 15.799546309245791 22.534110451616357 26 26.630108203237395 39.65297341425713 15.157854939407525 18.559063443097944 27 22.32918007775644 39.130426054429506 16.119471898608815 22.42092196920524 28 25.694153545546406 42.877021700871914 14.27964882461975 17.14917592896193 29 29.35623423290797 38.03173158637857 15.008498337136395 17.603535843577063 30 24.82026351536727 41.854711892987865 15.687395025461553 17.63762956618331 31 29.16826707530062 38.82415133731707 14.758868048259849 17.248713539122463 32 25.85829859275567 39.2549568056959 17.889702290536064 16.997042311012372 33 28.8606540373793 39.14411038470031 15.206369068729463 16.78886650919092 34 23.33733714308657 41.18474849606199 15.980286534485181 19.49762782636626 35 23.45875629847231 45.38965210350573 15.551789669501675 15.599801928520286 36 27.78665158825222 40.57741851299175 14.667996065336823 16.967933833419206 37 24.741938290027502 39.9270949739362 17.690627070215 17.640339665821294 38 29.530550518264732 38.17258985151331 14.65360911664135 17.64325051358061 39 27.951867292108588 35.28887654659699 14.902469871052789 21.856786290241633 40 27.754732636960405 33.93115008598711 18.83800295768899 19.476114319363493 41 27.15543257874345 32.793878520620176 16.358730201216535 23.69195869941984 42 27.812882676106288 34.05691878400171 17.132045422608254 20.998153117283742 43 27.102736196893755 34.445567146900785 18.27922056196091 20.17247609424455 44 27.296960004282628 34.47106215830997 18.141406976666378 20.09057086074103 45 29.780415013282834 32.16075240395875 17.70805869875068 20.350773884007737 46 27.103371899277978 32.47488975582337 19.802597680690038 20.61914066420862 47 28.976284955266628 31.982086575973128 17.837574695030145 21.2040537737301 48 28.730535796735836 32.09443860787869 18.153853360188972 21.0211722351965 49 27.99195000033458 31.472320179870316 18.274369149028715 22.26136067076639 50 24.180579626742325 33.25533153552238 19.79389859543231 22.77019024230298 51 23.425030614088506 33.87420453556922 19.554640292824594 23.146124557517684 52 26.99991970075147 30.305237518485555 20.221927048132706 22.47291573263027 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 141.0 4 282.0 5 321.5 6 361.0 7 1252.0 8 2143.0 9 27291.5 10 52440.0 11 41223.0 12 30006.0 13 22322.0 14 13830.5 15 13023.0 16 14623.0 17 16223.0 18 18598.0 19 20973.0 20 25542.0 21 30111.0 22 36992.5 23 43874.0 24 54459.5 25 65045.0 26 75154.0 27 85263.0 28 92944.0 29 100625.0 30 108169.0 31 115713.0 32 115851.0 33 115989.0 34 108671.5 35 101354.0 36 95552.0 37 89750.0 38 87771.0 39 80880.0 40 75968.0 41 77113.5 42 78259.0 43 82289.5 44 86320.0 45 87307.0 46 88294.0 47 90161.5 48 92029.0 49 98323.5 50 104618.0 51 138588.5 52 172559.0 53 172325.5 54 172092.0 55 182703.0 56 193314.0 57 194179.5 58 195045.0 59 179269.5 60 163494.0 61 160633.0 62 157772.0 63 137328.0 64 106989.5 65 97095.0 66 81424.0 67 65753.0 68 57412.5 69 49072.0 70 41992.5 71 34913.0 72 35956.0 73 36999.0 74 26980.0 75 16961.0 76 10933.0 77 4905.0 78 3318.0 79 1731.0 80 1291.5 81 852.0 82 510.5 83 169.0 84 123.0 85 77.0 86 50.5 87 24.0 88 20.0 89 8.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2988820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.483884814060694 #Duplication Level Percentage of deduplicated Percentage of total 1 82.0854880964882 22.56028099749832 2 7.835270393448629 4.306873379611242 3 2.769724045433712 2.2836832989430307 4 1.2979646631997066 1.4269244518440727 5 0.795373461579976 1.0929976301112394 6 0.5316985459529178 0.8767884955664129 7 0.39417937904575445 0.758350645484004 8 0.29808709682356577 0.6554073146925312 9 0.2650648537919286 0.6556510718885884 >10 2.62788972560838 17.19822475950921 >50 0.7137002105189669 13.488724725321251 >100 0.3490106042840556 18.083707281439633 >500 0.02310283144744022 4.415628773316891 >1k 0.011734771528858524 6.793318968491158 >5k 0.0012223720342560962 2.2217733302831513 >10k+ 4.889488137024386E-4 3.1816648759993624 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 38346 1.2829812434338637 No Hit CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGAAG 29396 0.9835319624467181 No Hit CAAAGTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15863 0.5307445747820211 No Hit CAAAGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 11100 0.37138402446450436 No Hit CAAAGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 9969 0.3335430035933914 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAA 7594 0.25408020556607624 No Hit CAAAGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6973 0.23330277500819724 No Hit CAAAGTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 6234 0.20857729806411895 No Hit CAAAGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6174 0.2065698168507973 No Hit CAAAGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6035 0.20191915203993546 No Hit CAAAGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 6007 0.20098232747371875 No Hit CAAAGTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 5956 0.19927596844239534 No Hit CAAAGTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 5939 0.19870718209862087 No Hit CAAAGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5252 0.17572152220608803 No Hit CAAAGTGGGGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAAA 4834 0.16173606975328056 No Hit CAAAGTGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 4604 0.15404072510221425 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAA 4557 0.15246819815177895 No Hit CAAAGTGGGGCAGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAA 4548 0.1521670759697807 No Hit CAAAGTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 4443 0.14865398384646783 No Hit CAAAGTGGGAGTGCAGTGCTCAAAGTGGGAAAAAAAAAAAAAAAAAAAAAAA 4140 0.13851620371919351 No Hit CAAAGTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3988 0.13343058464544535 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGGAAAAAAAAAAAAAAAAAAAAA 3808 0.12740814100548042 No Hit CAAAGTGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 3792 0.126872812681928 Illumina Single End Adapter 2 (97% over 34bp) CAAAGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTCAAAGTGGGGAG 3728 0.12473149938771824 No Hit CAAAGTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3658 0.1223894379721763 No Hit CAAAGTGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 3509 0.11740419295909423 No Hit CAAAGTGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 3503 0.11720344483776206 No Hit CAAAGTGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 3444 0.11522942164466243 No Hit CAAAGTGGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGAACTCT 3276 0.10960847424736184 No Hit CAAAGTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3270 0.10940772612602967 No Hit CAAAGTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3239 0.10837052749914683 No Hit CAAAGTGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 3185 0.10656379440715734 No Hit CAAAGTGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3176 0.10626267222515909 No Hit CAAAGTGGGGAGTGCAGTGCTCAAAGTGGGTAAAAAAAAAAAAAAAAAAAAA 3058 0.10231462583895985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0034461760828688247 0.0 0.0 0.0 0.0 8 0.018368453101893056 0.0 0.0 0.0 0.0 9 0.028004362925836954 0.0 0.0 0.0 0.0 10 0.1678588874539116 0.0 0.0 0.0 0.0 11 0.3728896353744956 0.0 0.0 0.0 0.0 12 0.5393098279588601 0.0 0.0 0.0 0.0 13 0.6471115691142324 0.0 0.0 0.0 0.0 14 0.740492903553911 0.0 0.0 0.0 0.0 15 0.834610314438474 0.0 0.0 0.0 0.0 16 0.9402038262591926 0.0 0.0 0.0 0.0 17 1.0321130078091019 0.0 0.0 0.0 0.0 18 1.1230519067725724 0.0 0.0 0.0 0.0 19 1.2262698991575272 0.0 0.0 0.0 0.0 20 1.3391238013664255 0.0 0.0 0.0 0.0 21 1.4573979028512924 0.0 0.0 0.0 0.0 22 1.5859101585240998 0.0 0.0 0.0 0.0 23 1.7391478911409854 0.0 0.0 0.0 0.0 24 1.89583179984074 0.0 0.0 0.0 0.0 25 2.0482330819520747 0.0 0.0 0.0 0.0 26 2.1943777142818903 0.0 0.0 0.0 0.0 27 2.33811336915572 0.0 0.0 0.0 0.0 28 2.553817225527131 0.0 0.0 0.0 0.0 29 2.6533882937078848 0.0 0.0 0.0 0.0 30 2.7705248225052026 0.0 0.0 0.0 0.0 31 2.8409539550725706 0.0 0.0 0.0 0.0 32 2.9058290562830815 0.0 0.0 0.0 0.0 33 2.9668564851680594 0.0 0.0 0.0 0.0 34 3.036616457330987 0.0 0.0 0.0 0.0 35 3.189285403604098 0.0 0.0 0.0 0.0 36 3.2471008625477613 0.0 0.0 0.0 0.0 37 3.2995295802356783 0.0 0.0 0.0 0.0 38 3.3514898856404867 0.0 0.0 0.0 0.0 39 3.4048219698743987 0.0 0.0 0.0 3.345802022202742E-5 40 3.4599942452205217 0.0 0.0 0.0 3.345802022202742E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATA 25 3.4184784E-5 46.0 24 TCGGTTA 25 3.4184784E-5 46.0 36 TACGTAC 20 6.313085E-4 46.0 17 TGGGATT 3915 0.0 43.47382 6 GTGGGAT 12555 0.0 42.06133 5 GTGGGAC 9910 0.0 41.752777 5 TGGGGCT 11155 0.0 41.73196 6 TGGGGGT 9965 0.0 41.61465 6 TGGGGGC 11690 0.0 41.41574 6 GTGGGGC 29770 0.0 41.356735 5 TGGGGTC 5935 0.0 41.272114 6 TGGGGTT 4910 0.0 41.034622 6 GTGGGGT 29100 0.0 40.989002 5 AGTGGGG 168075 0.0 40.97647 4 GGAAGCA 17830 0.0 40.956257 8 GTGGGGG 53765 0.0 40.87938 5 AAGCAGT 17015 0.0 40.822803 10 TGGGGAC 7050 0.0 40.812767 6 TGGGACT 3255 0.0 40.55914 6 GAAGCAG 17465 0.0 40.495277 9 >>END_MODULE