##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527578_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 734346 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23450526046305 33.0 31.0 34.0 31.0 34.0 2 32.518270678944255 34.0 31.0 34.0 31.0 34.0 3 32.95470118990231 34.0 31.0 34.0 31.0 34.0 4 35.907928959918074 37.0 35.0 37.0 35.0 37.0 5 36.09270698008841 37.0 35.0 37.0 35.0 37.0 6 36.30478684434858 37.0 37.0 37.0 35.0 37.0 7 36.6299373864636 37.0 37.0 37.0 35.0 37.0 8 36.73574718184616 37.0 37.0 37.0 36.0 37.0 9 38.750454145593494 39.0 39.0 39.0 39.0 39.0 10 37.78863505758866 39.0 37.0 39.0 35.0 39.0 11 37.85995293771601 39.0 37.0 39.0 35.0 39.0 12 37.709917395886954 39.0 37.0 39.0 35.0 39.0 13 37.7124706882042 39.0 37.0 39.0 35.0 39.0 14 38.4853121008353 40.0 38.0 40.0 35.0 40.0 15 38.5117288035885 40.0 38.0 40.0 35.0 40.0 16 38.603462128206594 40.0 38.0 40.0 35.0 40.0 17 38.56202661960438 40.0 38.0 40.0 35.0 40.0 18 38.479878694784205 40.0 38.0 40.0 35.0 40.0 19 38.39334727771377 40.0 38.0 40.0 35.0 40.0 20 38.35879953046656 40.0 38.0 40.0 35.0 40.0 21 38.27732703657404 40.0 38.0 40.0 34.0 40.0 22 38.282146290713094 40.0 38.0 40.0 35.0 40.0 23 38.129084927268615 40.0 38.0 40.0 34.0 40.0 24 38.0544498097627 40.0 38.0 40.0 34.0 40.0 25 38.10714703967884 40.0 38.0 40.0 35.0 40.0 26 38.082700797716605 40.0 38.0 40.0 35.0 40.0 27 38.02419567887617 40.0 38.0 40.0 35.0 40.0 28 37.93643051095805 40.0 38.0 40.0 34.0 40.0 29 37.89442851190039 40.0 38.0 40.0 34.0 40.0 30 37.806712367194756 40.0 37.0 40.0 34.0 40.0 31 37.80882853586729 40.0 37.0 40.0 34.0 40.0 32 37.67056809732742 40.0 37.0 40.0 34.0 40.0 33 37.482997115801 40.0 37.0 40.0 33.0 40.0 34 37.080530158807974 39.0 36.0 40.0 32.0 40.0 35 36.99984612158301 39.0 35.0 40.0 32.0 40.0 36 36.983637141075185 39.0 35.0 40.0 32.0 40.0 37 36.90700432766026 39.0 35.0 40.0 32.0 40.0 38 37.002688106151595 39.0 35.0 40.0 32.0 40.0 39 36.98968333728243 39.0 35.0 40.0 32.0 40.0 40 36.82483461474564 39.0 35.0 40.0 32.0 40.0 41 36.77941324661672 39.0 35.0 40.0 32.0 40.0 42 36.62105601446729 39.0 35.0 40.0 32.0 40.0 43 36.51124129497539 39.0 35.0 40.0 32.0 40.0 44 36.45616643925343 38.0 35.0 40.0 31.0 40.0 45 36.362720025709955 38.0 35.0 40.0 31.0 40.0 46 36.17527432572656 38.0 35.0 40.0 31.0 40.0 47 36.11340566980687 38.0 35.0 40.0 31.0 40.0 48 35.84594591650257 38.0 35.0 40.0 30.0 40.0 49 35.67958155964627 37.0 34.0 40.0 30.0 40.0 50 36.019631073090885 38.0 35.0 40.0 31.0 40.0 51 36.118301182276475 38.0 35.0 40.0 32.0 40.0 52 35.74908558091145 37.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 8.0 14 7.0 15 15.0 16 17.0 17 42.0 18 77.0 19 145.0 20 228.0 21 397.0 22 631.0 23 959.0 24 1267.0 25 1845.0 26 2359.0 27 3248.0 28 4290.0 29 5646.0 30 7249.0 31 9998.0 32 14043.0 33 21536.0 34 44141.0 35 49558.0 36 74908.0 37 126597.0 38 279970.0 39 85162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.57894507493744 0.27412146317948216 0.11670248084690324 0.0302309810361873 8 99.25253218510076 0.563358416877058 0.1482952177856215 0.035814180236564234 9 97.68705759955117 1.4805010172316593 0.2357199467281091 0.5967214364890665 10 53.17711269619498 35.6938010147805 4.416855269859167 6.712231019165353 11 33.42280069612962 22.41790654541592 23.423971806205792 20.735320952248667 12 28.620023803493176 16.8506398890986 28.82905333453168 25.700282972876547 13 25.484853189096146 16.621320195112386 30.344142951687626 27.549683664103842 14 27.499434871300448 17.75293935011561 28.916205712293657 25.831420066290278 15 25.741135649952472 20.076231095423683 27.42957679350061 26.753056461123233 16 30.223082851952622 23.234960086934496 22.953893668652107 23.588063392460775 17 30.99982841875628 22.065347942250654 22.64613683468011 24.288686804312952 18 30.666062047045944 20.12675223940758 24.368621875791522 24.838563837754954 19 31.16691586799683 21.72763247842298 21.517785893842955 25.587665759737238 20 31.823146037426497 20.75833462700144 23.633409864015057 23.785109471557004 21 32.12354938952483 20.016586186892827 25.303194951698515 22.556669471883826 22 33.6882069215329 19.22336337366854 22.99488252131829 24.093547183480265 23 31.072410008361178 21.534671667034342 23.5583771137856 23.834541210818877 24 29.760085845092092 21.07712168378394 22.59861155368178 26.564180917442187 25 28.540088732014606 21.33313179345976 22.780542142259915 27.346237332265716 26 27.957257205731356 21.902209585127448 22.601607416667346 27.538925792473844 27 27.645687455232277 20.831052392196593 22.203021463996535 29.320238688574594 28 28.4518469495306 22.437107303641607 22.458895398082106 26.652150348745685 29 30.648359220313043 21.384061464214415 21.764536063381566 26.203043252090975 30 28.379810062286715 21.670847257287438 21.603985042473166 28.345357637952684 31 29.988043783175776 21.55005950873294 21.219016648827665 27.24288005926362 32 33.13138493298799 21.638573642397454 21.89308582058049 23.336955604034067 33 31.538266702617022 21.427092950734394 23.609034433359753 23.42560591328883 34 28.773085166937655 23.072911134533314 26.359372829701535 21.7946308688275 35 28.489431412440457 24.765846072559803 24.93552085801516 21.80920165698458 36 28.92410389652834 24.691630375871863 22.82684184294597 23.55742388465383 37 29.712288212913258 26.018252976117523 20.683846579132997 23.58561223183622 38 30.620987926672168 25.117996148954308 21.25973315031334 23.001282774060183 39 29.980962652482617 23.38870232833024 21.690456542283883 24.939878476903257 40 28.072461755085477 23.806761390407246 22.75303467302879 25.367742181478487 41 27.048285140791943 22.56211649549395 23.934357918474397 26.45524044523971 42 27.39743935420088 21.818461597121793 22.525076734945106 28.259022313732217 43 25.515492696903095 22.13561454682125 24.996118995677787 27.352773760597866 44 27.893118502722146 22.086863685510643 25.154082680371374 24.865935131395826 45 27.85703197130508 21.25047321017613 24.162860558919093 26.7296342595997 46 26.58705841660471 22.89070819477467 24.49921426684424 26.02301912177638 47 27.643917172558986 24.04520484894042 23.61597938846266 24.69489859003794 48 28.546216633575998 22.601607416667346 24.70252442309211 24.14965152666454 49 27.10030421626863 22.651992385060993 24.36535366162545 25.882349737044937 50 26.896313182069488 23.252799089257653 23.986649345131585 25.86423838354127 51 26.90924986314353 22.749766458862716 24.203985587175527 26.136998090818224 52 27.79765941395473 22.439966991036922 23.75365291020854 26.00872068479981 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 5.0 4 10.0 5 11.0 6 12.0 7 23.5 8 35.0 9 161.5 10 288.0 11 663.5 12 1039.0 13 1030.5 14 959.0 15 896.0 16 967.5 17 1039.0 18 1035.5 19 1032.0 20 1162.0 21 1292.0 22 1489.5 23 1687.0 24 2271.0 25 2855.0 26 3518.5 27 4182.0 28 4136.5 29 4091.0 30 5713.0 31 7335.0 32 7537.5 33 7740.0 34 8851.0 35 9962.0 36 11571.5 37 13181.0 38 14478.0 39 16435.5 40 17096.0 41 20719.0 42 24342.0 43 23564.0 44 22786.0 45 25166.5 46 27547.0 47 29467.5 48 31388.0 49 33678.5 50 35969.0 51 37287.5 52 38606.0 53 42346.0 54 46086.0 55 49919.0 56 53752.0 57 63368.5 58 72985.0 59 66898.0 60 60811.0 61 57755.5 62 54700.0 63 56618.0 64 47831.0 65 37126.0 66 29797.0 67 22468.0 68 19737.5 69 17007.0 70 14998.5 71 12990.0 72 14276.0 73 15562.0 74 11389.0 75 7216.0 76 4937.0 77 2658.0 78 1622.0 79 586.0 80 500.5 81 415.0 82 279.5 83 144.0 84 112.5 85 81.0 86 48.0 87 15.0 88 8.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 734346.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.732605610979022 #Duplication Level Percentage of deduplicated Percentage of total 1 67.69319024499447 6.588311232035035 2 9.893523247191169 1.925795197359283 3 3.4629430118509608 1.0111037576292374 4 1.641225112283304 0.6389358694675262 5 0.8898714163786711 0.43303837700484515 6 0.6072392998558855 0.3546012370190618 7 0.4813140994249416 0.32791082132945504 8 0.3931664591232808 0.3061227268889597 9 0.3917672902296036 0.34316248743780176 >10 9.556323543814974 25.64812772180961 >50 3.240475157756293 21.678336914751355 >100 1.669208490156847 32.21505938617491 >500 0.053168417959731915 3.4362548444466237 >1k 0.026584208979865957 5.093239426646295 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCAATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 4237 0.5769759759023676 No Hit TGCAATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3928 0.5348977185141609 No Hit TGCAATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 3817 0.5197822279960672 No Hit TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3270 0.44529418012762373 No Hit TGCAATGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2322 0.3161997205676888 No Hit TGCAATGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 2132 0.2903263584196005 No Hit TGCAATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 1928 0.262546538007969 No Hit TGCAATGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGGC 1851 0.2520610175584806 No Hit TGCAATGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 1511 0.205761316872428 No Hit TGCAATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 1490 0.20290162947711296 No Hit TGCAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1450 0.19745460586698912 No Hit TGCAATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1314 0.17893472559256807 No Hit TGCAATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1261 0.171717419309154 No Hit TGCAATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1253 0.17062801458712923 No Hit TGCAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1245 0.16953860986510447 No Hit TGCAATGGGGTGCCAGGCGGTGGTGGCGCACGCCTTTAATCCCAGCACTTGG 1220 0.16613422010877707 No Hit TGCAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1161 0.1580998602838444 No Hit TGCAATGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 1010 0.1375373461556269 No Hit TGCAATGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1002 0.13644794143360214 No Hit TGCAATGGGGGGCTGGAGAGATGGCTTAGCAGTTAAGAGCACTGACTGCTCT 978 0.13317972726752783 No Hit TGCAATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 939 0.1278688792476571 No Hit TGCAATGGGGGATGCAAGAGCCTAGTGCGGTGCTGTGAGAAGTATCGGTGGG 926 0.12609859657436684 No Hit TGCAATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 908 0.12364743594981112 No Hit TGCAATGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 907 0.12351126035955802 No Hit TGCAATGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 856 0.11656630525665014 No Hit TGCAATGGGGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGA 819 0.11152780841728559 No Hit TGCAATGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 806 0.10975752574399535 No Hit TGCAATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGCTC 795 0.10825959425121129 No Hit TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACTGACTGCTCT 781 0.10635313598766793 No Hit TGCAATGGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCT 781 0.10635313598766793 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.004493794478352167 0.0 0.0 0.0 0.0 8 0.005447023610123838 0.0 0.0 0.0 0.0 9 0.005991725971136222 0.0 0.0 0.0 0.0 10 0.02151574325998916 0.0 0.0 0.0 0.0 11 0.03881004322213235 0.0 0.0 0.0 0.0 12 0.04902321249111454 0.0 0.0 0.0 0.0 13 0.05746609908680649 0.0 0.0 0.0 0.0 14 0.06713456599477631 0.0 0.0 0.0 0.0 15 0.0773477352637585 0.0 0.0 0.0 0.0 16 0.09028441633780261 0.0 0.0 0.0 0.0 17 0.10281257064108744 0.0 0.0 0.0 0.0 18 0.11030222810500773 0.0 0.0 0.0 0.0 19 0.12024304619348372 0.0 0.0 0.0 0.0 20 0.12936681074044115 0.0 0.0 0.0 0.0 21 0.1420311406339791 0.0 0.0 0.0 0.0 22 0.15061020281992413 0.0 0.0 0.0 0.0 23 0.15987014295713464 0.0 0.0 0.0 0.0 24 0.16872155632358588 0.0 0.0 0.0 0.0 25 0.17743679409978402 0.0 0.0 0.0 0.0 26 0.18628820746623526 0.0 0.0 0.0 0.0 27 0.19881636176952008 0.0 0.0 0.0 0.0 28 0.21379567669736063 0.0 0.0 0.0 0.0 29 0.21992357825874997 0.0 0.0 0.0 0.0 30 0.23027292311798525 0.0 0.0 0.0 0.0 31 0.24157549710899223 0.0 0.0 0.0 0.0 32 0.2530142466902523 0.0 0.0 0.0 0.0 33 0.26172948446645045 0.0 0.0 0.0 0.0 34 0.2722150049159388 0.0 0.0 0.0 0.0 35 0.2861049151217546 0.0 0.0 0.0 0.0 36 0.30026717650807655 0.0 0.0 0.0 0.0 37 0.3130676819918676 0.0 0.0 0.0 0.0 38 0.3227361488998374 0.0 0.0 0.0 0.0 39 0.33185991344679483 0.0 0.0 0.0 0.0 40 0.34193690712552394 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTAC 35 1.0188887E-7 46.000004 24 CCGTACC 35 1.0188887E-7 46.000004 35 ATAAGCG 35 1.0188887E-7 46.000004 39 GCGATTA 35 1.0188887E-7 46.000004 23 AACGTAA 30 1.8604787E-6 46.0 41 ACACGTT 20 6.3099584E-4 46.0 33 CAAACCG 20 6.3099584E-4 46.0 11 CGTATGG 20 6.3099584E-4 46.0 13 CTCGTAC 20 6.3099584E-4 46.0 28 CTCGTAA 20 6.3099584E-4 46.0 40 CGTATAG 25 3.415942E-5 46.0 46 TTTACGT 20 6.3099584E-4 46.0 12 CAACGAA 20 6.3099584E-4 46.0 46 ACGTTAT 50 1.6370905E-11 46.0 22 ACGTTAC 25 3.415942E-5 46.0 26 CCGATAT 20 6.3099584E-4 46.0 13 GACGTTA 20 6.3099584E-4 46.0 9 ACCGCAA 30 1.8604787E-6 46.0 35 GACGTAT 20 6.3099584E-4 46.0 11 ATTACGA 50 1.6370905E-11 46.0 44 >>END_MODULE