##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527577_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1012106 Sequences flagged as poor quality 0 Sequence length 52 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28259490606715 31.0 31.0 33.0 30.0 34.0 2 31.570638846128766 31.0 31.0 34.0 30.0 34.0 3 32.25519164988648 34.0 31.0 34.0 30.0 34.0 4 35.06115762578228 35.0 35.0 37.0 33.0 37.0 5 35.340943537534606 37.0 35.0 37.0 33.0 37.0 6 35.732704874785846 37.0 35.0 37.0 35.0 37.0 7 36.37546264916916 37.0 36.0 37.0 35.0 37.0 8 36.571658502172696 37.0 37.0 37.0 35.0 37.0 9 38.63588892863 39.0 39.0 39.0 38.0 39.0 10 37.19708805204198 39.0 37.0 39.0 34.0 39.0 11 37.186427113365596 39.0 37.0 39.0 34.0 39.0 12 37.047667932015024 39.0 37.0 39.0 34.0 39.0 13 37.018447672476995 39.0 37.0 39.0 33.0 39.0 14 37.78102096025515 40.0 37.0 40.0 33.0 40.0 15 37.81188037616613 40.0 37.0 40.0 33.0 40.0 16 37.87334528201592 40.0 37.0 40.0 33.0 40.0 17 37.86932692820712 40.0 37.0 40.0 33.0 40.0 18 37.80337929031149 40.0 37.0 40.0 33.0 40.0 19 37.678006058653935 40.0 37.0 40.0 33.0 40.0 20 37.59059525385681 40.0 37.0 40.0 33.0 40.0 21 37.593563322418795 40.0 37.0 40.0 33.0 40.0 22 37.60582784807125 40.0 37.0 40.0 33.0 40.0 23 37.534639652368426 39.0 37.0 40.0 33.0 40.0 24 37.51694091330355 39.0 37.0 40.0 33.0 40.0 25 37.52207575095889 39.0 37.0 40.0 33.0 40.0 26 37.45919893766068 39.0 36.0 40.0 33.0 40.0 27 37.3965562895586 39.0 36.0 40.0 33.0 40.0 28 37.243028892230654 39.0 36.0 40.0 33.0 40.0 29 37.22689224251215 39.0 36.0 40.0 33.0 40.0 30 37.16620591123855 39.0 36.0 40.0 32.0 40.0 31 37.12888274548318 39.0 36.0 40.0 32.0 40.0 32 36.98501342744732 39.0 36.0 40.0 32.0 40.0 33 36.85359142224233 39.0 35.0 40.0 32.0 40.0 34 36.538119525029984 39.0 35.0 40.0 31.0 40.0 35 36.44686030909806 38.0 35.0 40.0 31.0 40.0 36 36.45678812298316 38.0 35.0 40.0 31.0 40.0 37 36.426327874748296 38.0 35.0 40.0 31.0 40.0 38 36.27503542119106 38.0 35.0 40.0 31.0 40.0 39 36.19314281310456 38.0 35.0 40.0 31.0 40.0 40 36.41027718440559 38.0 35.0 40.0 31.0 40.0 41 36.53534708815084 39.0 35.0 40.0 31.0 40.0 42 36.55346179155148 39.0 35.0 40.0 32.0 40.0 43 36.47179149219548 38.0 35.0 40.0 31.0 40.0 44 36.41406532517345 38.0 35.0 40.0 31.0 40.0 45 36.32652607533203 38.0 35.0 40.0 31.0 40.0 46 36.048897052285035 38.0 35.0 40.0 31.0 40.0 47 36.04073683981717 38.0 35.0 40.0 31.0 40.0 48 35.89838712545919 37.0 35.0 40.0 31.0 40.0 49 35.78341201415662 37.0 35.0 40.0 31.0 40.0 50 35.61923355854031 37.0 34.0 40.0 30.0 40.0 51 35.4676456813812 37.0 34.0 40.0 30.0 40.0 52 35.02045734340079 36.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 9.0 16 28.0 17 59.0 18 125.0 19 242.0 20 405.0 21 655.0 22 1076.0 23 1656.0 24 2528.0 25 3491.0 26 4805.0 27 6714.0 28 9233.0 29 11972.0 30 15943.0 31 20975.0 32 28716.0 33 42190.0 34 73177.0 35 77665.0 36 117208.0 37 192009.0 38 335989.0 39 65228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 100.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.59688016867798 0.2709202395796488 0.10581895572202911 0.026380636020337793 8 99.27319865705766 0.5588347465581668 0.13308882666440075 0.03487776971977243 9 97.7197052482645 1.466743601954736 0.23288074569264486 0.5806704040881094 10 53.07556718367443 35.77807067639161 4.365649447785113 6.780712692148846 11 33.27210786221996 22.5017932904261 23.620747233985373 20.605351613368562 12 28.59868432753091 16.89388265655969 28.834035170229207 25.673397845680196 13 25.265239016466655 16.701412697879473 30.307201024398626 27.726147261255246 14 27.227681685515154 17.780449873827443 29.015340290443888 25.97652815021351 15 25.74631510928697 20.06548721181378 27.478050718007797 26.710146960891446 16 30.125994708064173 23.245490096887085 22.98899522382043 23.63951997122831 17 30.928282215499163 22.038501896046462 22.717976180360555 24.315239708093817 18 30.43663410749467 20.164389895919992 24.39309716571189 25.005878830873446 19 30.870778357207644 21.811549383167375 21.513556880405808 25.804115379219173 20 31.506778934222307 20.993156843255548 23.726269778066726 23.773794444455422 21 31.98449569511494 19.948997437027348 25.308613919885865 22.757892947971854 22 33.41211296050018 19.315466957018337 23.00450743301591 24.26791264946557 23 30.93124633190595 21.692787119135744 23.652463279537912 23.723503269420394 24 29.793717258864188 21.12940739408718 22.48707151227243 26.5898038347762 25 28.38665120056595 21.40862715960581 22.86005616012552 27.34466547970272 26 27.801040602466543 21.998980343956067 22.73161111583174 27.468367937745654 27 27.586142162975026 20.892179277664592 22.22968740428374 29.29199115507664 28 28.566968281978372 22.47966122125548 22.469682029352654 26.48368846741349 29 30.533165498475455 21.4701819769866 21.817971635382065 26.17868088915588 30 28.294763591955785 21.766988833185458 21.581237538360607 28.357010036498153 31 30.09783560219977 21.749994565786587 21.051945151990008 27.100224680023633 32 33.125384100084375 21.657316526134615 21.872313769506356 23.34498560427465 33 31.59886415059292 21.47561619039903 23.48350864435148 23.442011014656565 34 28.669823121293618 23.24311880376166 26.3141410089457 21.772917065999014 35 28.375091146579507 24.964084789537853 24.856289756211307 21.804534307671332 36 28.838184933198697 24.792857665106226 22.725584079137956 23.643373322557125 37 29.611819315368155 25.959533882814647 20.737551205110925 23.691095596706273 38 30.704096211266407 24.95953981104746 21.318221609199036 23.018142368487098 39 30.009504933277743 23.415827986396682 21.534305695253263 25.040361385072313 40 28.08184123006879 23.756800177056554 22.765303238988803 25.39605535388586 41 26.98096839659087 22.619567515655476 23.837720554961635 26.561743532792022 42 27.027307416416857 21.99473177710635 22.652568011650953 28.325392794825838 43 25.497230527237264 22.025854999377536 25.09687720456158 27.38003726882362 44 27.790863802803262 22.09689498926002 25.245577044301683 24.866664163635036 45 27.686032885883492 21.296879971070222 24.311583964525454 26.70550317852083 46 26.647702908588627 22.96014449079444 24.453861552050874 25.938291048566057 47 27.523302895151296 23.971797420428295 23.631418053049778 24.873481631370627 48 28.369064109885723 22.703649617727788 24.764994970882494 24.162291301503995 49 26.986797825524206 22.6698586906905 24.401890711052005 25.941452772733292 50 26.843927414717434 23.18413288726675 23.908464133203438 26.063475564812382 51 26.773480248116304 22.715209671714227 24.450107004602284 26.061203075567185 52 27.683760396638295 22.463062169377515 23.724096092701753 26.129081341282433 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 10.5 4 21.0 5 16.5 6 12.0 7 25.0 8 38.0 9 254.5 10 471.0 11 849.0 12 1227.0 13 1237.0 14 1227.5 15 1208.0 16 1315.5 17 1423.0 18 1432.5 19 1442.0 20 1643.5 21 1845.0 22 2095.5 23 2346.0 24 3177.0 25 4008.0 26 4997.0 27 5986.0 28 5866.5 29 5747.0 30 8023.0 31 10299.0 32 10518.0 33 10737.0 34 12337.0 35 13937.0 36 16073.5 37 18210.0 38 19818.5 39 22411.5 40 23396.0 41 28783.0 42 34170.0 43 33014.5 44 31859.0 45 35205.0 46 38551.0 47 40914.5 48 43278.0 49 46473.5 50 49669.0 51 51808.0 52 53947.0 53 59006.5 54 64066.0 55 68992.5 56 73919.0 57 87129.0 58 100339.0 59 91927.0 60 83515.0 61 79333.0 62 75151.0 63 76784.5 64 64921.0 65 51424.0 66 41171.0 67 30918.0 68 27081.5 69 23245.0 70 20735.5 71 18226.0 72 19977.5 73 21729.0 74 15722.0 75 9715.0 76 6538.5 77 3362.0 78 2053.5 79 745.0 80 675.5 81 606.0 82 373.0 83 140.0 84 103.5 85 67.0 86 41.0 87 15.0 88 10.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1012106.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.097169664047046 #Duplication Level Percentage of deduplicated Percentage of total 1 69.19292300674465 6.294597601437004 2 10.29726412737719 1.8735191768451132 3 4.042444582016444 1.10324412660334 4 1.8702551236518847 0.6805611269965794 5 0.9731408773473221 0.44264138341240944 6 0.6473124585926385 0.3533226756881196 7 0.4463849336939168 0.28425876341015666 8 0.3160535661920433 0.23001543316609133 9 0.3030204294418559 0.2480965432474464 >10 6.138607409338243 16.088927444358596 >50 3.5667350906346056 22.822016666238518 >100 2.0635799854463306 36.9666813555102 >500 0.10969556764741022 6.363957925355644 >1k 0.029324557687921537 4.6628515195048745 >5k 0.003258284187546838 1.5853082582259168 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGCAATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5468 0.5402596170756818 No Hit TGCAATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5395 0.533046933819185 No Hit TGCAATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 5182 0.5120017073310503 No Hit TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4590 0.45350981023726766 No Hit TGCAATGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 3221 0.3182472982078952 No Hit TGCAATGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACAAC 3062 0.3025374812519637 No Hit TGCAATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2732 0.26993220077738894 No Hit TGCAATGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGGC 2225 0.21983863350281493 No Hit TGCAATGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 2107 0.2081797756361488 No Hit TGCAATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 2084 0.20590728639095116 No Hit TGCAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2039 0.20146111178078185 No Hit TGCAATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1709 0.16885583130620704 No Hit TGCAATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 1673 0.16529889161807163 No Hit TGCAATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 1667 0.16470606833671572 No Hit TGCAATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1557 0.15383764151185744 No Hit TGCAATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1530 0.15116993674575588 No Hit TGCAATGGGGTGCCAGGCGGTGGTGGCGCACGCCTTTAATCCCAGCACTTGG 1523 0.150478309584174 No Hit TGCAATGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 1456 0.14385844960903305 No Hit TGCAATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1415 0.13980749051976768 No Hit TGCAATGGGGGGCTGGAGAGATGGCTTAGCAGTTAAGAGCACTGACTGCTCT 1327 0.13111274905988107 No Hit TGCAATGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1246 0.12310963476157635 No Hit TGCAATGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 1181 0.11668738254688737 No Hit TGCAATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGCTC 1138 0.11243881569717007 No Hit TGCAATGGGGGATGCAAGAGCCTAGTGCGGTGCTGTGAGAAGTATCGGTGGG 1138 0.11243881569717007 No Hit TGCAATGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 1136 0.1122412079367181 No Hit TGCAATGGGGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGA 1132 0.11184599241581415 No Hit TGCAATGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTGC 1116 0.11026513033219841 No Hit TGCAATGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACTGACTGCTCT 1101 0.10878307212880865 No Hit TGCAATGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 1056 0.10433689751863935 No Hit TGCAATGGGGGGGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCT 1032 0.10196560439321573 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002865312526553543 0.0 0.0 0.0 0.0 8 0.0037545474485874007 0.0 0.0 0.0 0.0 9 0.004742586250847243 0.0 0.0 0.0 0.0 10 0.019958383805648815 0.0 0.0 0.0 0.0 11 0.03487776971977243 0.0 0.0 0.0 0.0 12 0.044362942221466924 0.0 0.0 0.0 0.0 13 0.05068639055592991 0.0 0.0 0.0 0.0 14 0.057800269932200776 0.0 0.0 0.0 0.0 15 0.0663962075118614 0.0 0.0 0.0 0.0 16 0.07657300717513778 0.0 0.0 0.0 0.0 17 0.08635459131751022 0.0 0.0 0.0 0.0 18 0.09327086293332912 0.0 0.0 0.0 0.0 19 0.10166919275253777 0.0 0.0 0.0 0.0 20 0.10868426824858266 0.0 0.0 0.0 0.0 21 0.11688499030733936 0.0 0.0 0.0 0.0 22 0.12310963476157635 0.0 0.0 0.0 0.0 23 0.13180437622146296 0.0 0.0 0.0 0.0 24 0.14010390216044563 0.0 0.0 0.0 0.0 25 0.14879864362033227 0.0 0.0 0.0 9.880388022598423E-5 26 0.15887663940338265 0.0 0.0 0.0 9.880388022598423E-5 27 0.1678677925039472 0.0 0.0 0.0 9.880388022598423E-5 28 0.1828859822982968 0.0 0.0 0.0 9.880388022598423E-5 29 0.19009866555479366 0.0 0.0 0.0 9.880388022598423E-5 30 0.19918862253558423 0.0 0.0 0.0 9.880388022598423E-5 31 0.21262595024631809 0.0 0.0 0.0 9.880388022598423E-5 32 0.225470454675696 0.0 0.0 0.0 9.880388022598423E-5 33 0.23278194181241885 0.0 0.0 0.0 9.880388022598423E-5 34 0.24147668327230548 0.0 0.0 0.0 9.880388022598423E-5 35 0.256890088587559 0.0 0.0 0.0 9.880388022598423E-5 36 0.26993220077738894 0.0 0.0 0.0 9.880388022598423E-5 37 0.2809982353626992 0.0 0.0 0.0 9.880388022598423E-5 38 0.28989058458303774 0.0 0.0 0.0 9.880388022598423E-5 39 0.29986977648586216 0.0 0.0 0.0 9.880388022598423E-5 40 0.3098489683886866 0.0 0.0 0.0 9.880388022598423E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 20 6.311095E-4 46.0 19 AACGTTA 25 3.4168654E-5 46.0 39 AACCGTT 55 1.8189894E-12 46.0 32 GATACGG 40 5.6097633E-9 46.0 11 TCGTTAG 25 3.4168654E-5 46.0 20 CTCGTTA 25 3.4168654E-5 46.0 19 CTCGTAA 20 6.311095E-4 46.0 40 CTCAAAT 30 1.8611809E-6 46.0 23 CGAAATA 40 5.6097633E-9 46.0 20 ACGTTAT 20 6.311095E-4 46.0 22 TAGACGC 20 6.311095E-4 46.0 45 GACGTTA 50 1.6370905E-11 46.0 9 GGCGTAA 20 6.311095E-4 46.0 31 ACCGAAT 25 3.4168654E-5 46.0 20 GATTTCG 25 3.4168654E-5 46.0 38 CCTCGAT 25 3.4168654E-5 46.0 40 ATCGTGA 20 6.311095E-4 46.0 19 CGTTATC 20 6.311095E-4 46.0 23 CGTTAGC 20 6.311095E-4 46.0 40 GTTACGC 50 1.6370905E-11 46.0 12 >>END_MODULE