##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527573_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2103109 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.120406502943975 31.0 31.0 33.0 30.0 33.0 2 29.50051043478964 31.0 28.0 31.0 25.0 33.0 3 31.191932039661282 31.0 31.0 33.0 28.0 34.0 4 35.26250422588653 35.0 35.0 37.0 35.0 37.0 5 35.34644186297524 35.0 35.0 37.0 33.0 37.0 6 34.900692260838596 35.0 35.0 37.0 33.0 37.0 7 36.07613205021708 37.0 35.0 37.0 35.0 37.0 8 36.54083502091427 37.0 37.0 37.0 35.0 37.0 9 38.51448450841112 39.0 39.0 39.0 37.0 39.0 10 36.8287554282731 39.0 37.0 39.0 32.0 39.0 11 36.84223737333633 38.0 37.0 39.0 33.0 39.0 12 36.97539594952045 39.0 37.0 39.0 34.0 39.0 13 36.96954033290714 39.0 37.0 39.0 33.0 39.0 14 37.886459998031484 40.0 38.0 40.0 34.0 40.0 15 37.97974855321336 40.0 38.0 40.0 34.0 40.0 16 38.0718840535607 40.0 38.0 40.0 34.0 40.0 17 38.04855288052117 40.0 38.0 40.0 34.0 40.0 18 37.87516481551836 40.0 38.0 40.0 34.0 40.0 19 37.81546510428133 40.0 37.0 40.0 34.0 40.0 20 37.67004230403655 39.0 37.0 40.0 33.0 40.0 21 37.61577930578016 39.0 37.0 40.0 33.0 40.0 22 37.44525319419964 39.0 36.0 40.0 33.0 40.0 23 37.17665323100229 38.0 36.0 40.0 33.0 40.0 24 37.12596969534152 38.0 36.0 40.0 33.0 40.0 25 36.731548864086456 38.0 36.0 40.0 32.0 40.0 26 36.03755820549482 38.0 35.0 40.0 31.0 40.0 27 35.793018336187046 38.0 34.0 39.0 30.0 40.0 28 35.77593172774212 38.0 34.0 39.0 30.0 40.0 29 35.43384246845979 37.0 34.0 39.0 30.0 40.0 30 35.12011693164739 37.0 34.0 38.0 30.0 40.0 31 35.09012324135363 37.0 34.0 38.0 30.0 40.0 32 34.97238516881436 37.0 34.0 38.0 29.0 40.0 33 34.532853504026654 36.0 33.0 38.0 28.0 40.0 34 34.108415683637894 36.0 33.0 38.0 26.0 40.0 35 33.957398308884606 36.0 33.0 38.0 26.0 40.0 36 33.630116175623805 35.0 32.0 38.0 25.0 40.0 37 33.25517269908502 35.0 32.0 38.0 24.0 40.0 38 32.74638214186711 35.0 31.0 38.0 23.0 39.0 39 31.865003668378577 34.0 30.0 37.0 20.0 39.0 40 31.589842466557844 34.0 30.0 37.0 19.0 39.0 41 31.19854605728947 34.0 29.0 37.0 19.0 38.0 42 30.805804168970795 33.0 29.0 36.0 18.0 38.0 43 30.337928752147416 33.0 28.0 35.0 18.0 38.0 44 29.885880855438305 32.0 27.0 35.0 18.0 38.0 45 29.402485082798847 32.0 27.0 35.0 17.0 37.0 46 29.21118971960084 32.0 26.0 35.0 17.0 37.0 47 28.87025874550487 31.0 26.0 35.0 15.0 37.0 48 28.284669030468702 31.0 24.0 34.0 14.0 36.0 49 27.428331104093985 30.0 24.0 33.0 12.0 35.0 50 29.845943315348848 33.0 27.0 35.0 15.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 6.0 12 15.0 13 35.0 14 36.0 15 91.0 16 176.0 17 384.0 18 778.0 19 1461.0 20 2502.0 21 4002.0 22 6264.0 23 9441.0 24 13337.0 25 18828.0 26 26776.0 27 36717.0 28 49752.0 29 60704.0 30 66915.0 31 77224.0 32 106466.0 33 159332.0 34 230088.0 35 433210.0 36 597275.0 37 198344.0 38 2947.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.54985690232888 0.27159790576712856 0.14602191327220795 0.032523278631778 8 98.78632063292963 0.895911719268949 0.1664678340494953 0.1512998137519263 9 95.87605777922114 2.3926006688193526 0.8040001730770968 0.927341378882407 10 49.840260300345825 31.407834781744548 7.410885503319134 11.341019414590495 11 27.637702087718708 33.83295872919568 21.020451151129112 17.5088880319565 12 34.65759501766195 21.51871348560631 24.710321718940865 19.113369777790883 13 22.38405142101527 22.462839538987282 30.90224995470991 24.250859085287544 14 26.87235896950657 24.263839867548473 26.834082303865376 22.02971885907958 15 24.316809066957536 23.552797311028577 26.74521387146363 25.385179750550257 16 26.62325157659446 28.720147172590675 25.789390849451934 18.867210401362936 17 32.6574133818076 23.046023767669674 23.19485105146714 21.10171179905559 18 27.536803846115443 24.544899955256717 27.61754145885924 20.3007547397686 19 29.545116301627733 23.60781110251537 24.824818875293673 22.022253720563224 20 23.32832012035515 24.782833414720777 26.751490293655728 25.137356171268344 21 24.73195635604241 24.175494470329404 31.752942905003973 19.339606268624213 22 22.695637743930533 24.33378393606798 31.251352164818847 21.719226155182636 23 23.69049821003096 29.868684885091547 27.993366011937564 18.44745089293993 24 25.72662662753096 24.341249074584344 31.38054185493952 18.551582442945183 25 26.96469845357516 23.301455131426856 28.610404881534908 21.123441533463076 26 31.67001805422353 22.79924625875311 25.306106340660424 20.22462934636293 27 27.62624286235283 22.141886131436838 28.616015622585422 21.61585538362491 28 33.46849830417729 25.870699046031376 20.99933954921024 19.66146310058109 29 34.09033958772465 25.31499793876589 21.466980551174476 19.127681922334983 30 30.944615804506565 27.692525684593615 21.594363392482272 19.768495118417544 31 29.29334618414928 30.680007550726092 20.70767611188959 19.318970153235043 32 28.51411885926978 32.19676203183002 21.23499067333172 18.054128435568483 33 28.45011837237157 32.49061270718731 20.72417549447033 18.33509342597079 34 25.290890771709883 35.004652635693155 21.17075244316866 18.5337041494283 35 24.850067210020974 36.744552945187344 21.543248590539054 16.86213125425263 36 25.814448989567353 36.725390838040255 20.05207528473322 17.408084887659175 37 25.29293536378761 37.38917003350753 19.952175564842335 17.36571903786252 38 25.874027451739305 35.65093392686732 19.46779743703251 19.00724118436087 39 24.65307314076446 35.05438852670023 19.648767610237986 20.643770722297322 40 24.41532987591228 35.00446244108127 20.217164207846576 20.36304347515987 41 22.256097995871826 35.494546407247554 21.207127162691044 21.042228434189575 42 21.758216050618394 35.724729436277435 21.708337513652406 20.808716999451764 43 22.81327311137939 34.05539132779138 22.107413358033273 21.023922202795955 44 23.165418435278436 33.97403558255896 21.82321505922898 21.03733092293362 45 24.393124654975086 33.87156823540767 20.92292886388675 20.812378245730486 46 23.24648888859303 35.17668366214019 20.875522856875225 20.70130459239155 47 23.987677291096183 34.78497785896975 20.642772200584943 20.58457264934913 48 23.893198117643927 35.29793272721481 20.590373585011523 20.218495570129747 49 24.014304536759624 35.008599173889706 19.969483274523576 21.007613014827093 50 22.217678684271714 36.06132635065515 20.886126206487635 20.834868758585504 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 12.5 2 25.0 3 60.5 4 96.0 5 225.0 6 354.0 7 3319.5 8 6285.0 9 5211.0 10 4137.0 11 4105.5 12 4074.0 13 4247.0 14 4420.0 15 5614.5 16 6809.0 17 8083.5 18 9358.0 19 11554.0 20 13750.0 21 17350.0 22 20950.0 23 26721.0 24 32492.0 25 38404.0 26 44316.0 27 62352.0 28 80388.0 29 94333.0 30 108278.0 31 97287.5 32 86297.0 33 75912.0 34 65527.0 35 66628.0 36 67729.0 37 67285.5 38 66842.0 39 67444.0 40 68046.0 41 72864.5 42 77683.0 43 82477.5 44 87272.0 45 92728.0 46 98184.0 47 117368.5 48 136553.0 49 135374.0 50 134195.0 51 136029.5 52 137864.0 53 136431.5 54 134999.0 55 136547.0 56 138095.0 57 129647.0 58 121199.0 59 119878.5 60 118558.0 61 99715.5 62 80873.0 63 66690.5 64 52508.0 65 43057.0 66 33606.0 67 29331.0 68 25056.0 69 20157.5 70 15259.0 71 14341.5 72 13424.0 73 8819.5 74 4215.0 75 2821.5 76 1428.0 77 1502.5 78 1577.0 79 952.5 80 328.0 81 182.0 82 36.0 83 23.5 84 11.0 85 7.5 86 4.0 87 6.5 88 9.0 89 4.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2103109.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.014228384343323 #Duplication Level Percentage of deduplicated Percentage of total 1 77.03183181272479 13.10637179326023 2 8.436767885511427 2.870901912595694 3 3.112342770739463 1.588623321351633 4 1.5301362103898586 1.0413634777090661 5 0.9060648111924103 0.7707996814322289 6 0.6502942984594547 0.6638553426615289 7 0.538300935613472 0.641114254062331 8 0.4095735626937994 0.5574862508689169 9 0.3505847378792218 0.5368435918507997 >10 4.899385343735761 20.48796708846029 >50 1.2658451926352197 14.962396429270871 >100 0.8054819395181632 27.059093295646118 >500 0.040569919300552953 4.534998847286852 >1k 0.02056669520097476 6.757463216261744 >5k 0.0016904133041897062 2.188670102299728 >10k+ 5.634711013965687E-4 2.2320513949820304 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATTGTGGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAA 32610 1.5505615733659073 No Hit TATTGTGGGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAA 13954 0.6634939035494594 No Hit TATTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 9689 0.46069889863055125 No Hit TATTGTGGGGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAA 9039 0.429792274199768 No Hit TATTGTGGGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAA 7940 0.3775363045852592 No Hit TATTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 7162 0.3405434525742603 No Hit TATTGTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTATTGTGGGA 6572 0.31248974732170326 No Hit TATTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 5257 0.24996326866558033 No Hit TATTGTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 4591 0.21829586578727017 No Hit TATTGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 4537 0.21572823852686668 No Hit TATTGTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 4418 0.2100699488233848 No Hit TATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4328 0.20579057005604562 No Hit TATTGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4218 0.20056021822929768 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGTAAAAAAAAAAAAAAAAAAA 4024 0.19133577955303316 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGGAAAAAAAAAAAAAAAAAAA 4022 0.19124068224709226 No Hit TATTGTGGGAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAA 3929 0.18681865752084176 No Hit TATTGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3550 0.16879771804504665 No Hit TATTGTGGGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAA 3232 0.15367724640044808 No Hit TATTGTGGGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAA 3087 0.14678269171973493 No Hit TATTGTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 2943 0.1399356856919922 No Hit TATTGTGGGGAGTGCAGTGCTTATTGGGGGAAAAAAAAAAAAAAAAAAAA 2909 0.1383190314909974 No Hit TATTGTGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 2858 0.13589405018950518 No Hit TATTGTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 2832 0.13465778521227384 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGCAAAAAAAAAAAAAAAAAAA 2682 0.12752548726670848 No Hit TATTGTGGGGAGTGCAGTGCTTATTGTGGGGAGTGCAGTGCTTATTGTGG 2508 0.11925202164985267 No Hit TATTGTGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 2492 0.1184912432023257 No Hit TATTGTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 2383 0.11330844002854822 No Hit TATTGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2313 0.10998003432061772 No Hit TATTGTGGGACGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAA 2251 0.10703201783645071 No Hit TATTGTGGGGCAGAGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAA 2106 0.10013746315573754 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.705838356452281E-4 0.0 0.0 0.0 0.0 8 0.008368562922796679 0.0 0.0 0.0 0.0 9 0.018211134087676863 0.0 0.0 0.0 0.0 10 0.1402209776098148 0.0 0.0 0.0 0.0 11 0.28766935047113584 0.0 0.0 0.0 0.0 12 0.3445850880767473 0.0 0.0 0.0 0.0 13 0.3859524161610264 0.0 0.0 0.0 0.0 14 0.4282707173047141 0.0 0.0 0.0 0.0 15 0.47510614048059324 0.0 0.0 0.0 0.0 16 0.537394875871864 0.0 0.0 0.0 0.0 17 0.5748156657595969 0.0 0.0 0.0 0.0 18 0.612046261035448 0.0 0.0 0.0 0.0 19 0.6473749101924817 0.0 0.0 0.0 0.0 20 0.6895981140302285 0.0 0.0 0.0 0.0 21 0.7356252101056103 0.0 0.0 0.0 0.0 22 0.7892125420032913 0.0 0.0 0.0 0.0 23 0.8546394884906108 0.0 0.0 0.0 0.0 24 0.919923789019019 0.0 0.0 0.0 0.0 25 0.979739994455827 0.0 0.0 0.0 0.0 26 1.041838535235216 0.0 0.0 0.0 0.0 27 1.1131615146908695 0.0 0.0 0.0 0.0 28 1.2076882367960957 0.0 0.0 0.0 0.0 29 1.2666961151324063 0.0 0.0 0.0 0.0 30 1.341109757031138 0.0 0.0 0.0 0.0 31 1.4121949932219395 0.0 0.0 0.0 0.0 32 1.4819964157825392 0.0 0.0 0.0 0.0 33 1.5507993166307594 0.0 0.0 0.0 0.0 34 1.6229306231869105 0.0 0.0 0.0 0.0 35 1.7169343101094618 0.0 0.0 0.0 0.0 36 1.7867357326700612 0.0 0.0 0.0 0.0 37 1.8628611260757288 0.0 0.0 0.0 0.0 38 1.9369419274036677 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTATCG 20 7.857973E-4 44.000004 37 TAAGTCG 20 7.857973E-4 44.000004 44 CCGTCTA 20 7.857973E-4 44.000004 41 GCCGATA 20 7.857973E-4 44.000004 12 TATTCGC 40 8.3182385E-9 44.000004 25 TATTCGA 40 8.3182385E-9 44.000004 14 ACTACGG 20 7.857973E-4 44.000004 43 TCGTCAA 20 7.857973E-4 44.000004 36 CCAACGA 20 7.857973E-4 44.000004 20 GACCGTT 35 1.4468606E-7 44.0 44 TAACGGG 25 4.4441033E-5 44.0 31 AATGCGC 50 2.7284841E-11 44.0 29 GTCGTTA 30 2.5287227E-6 44.0 39 GCGATAG 35 1.4468606E-7 44.0 13 ATAACGG 25 4.4441033E-5 44.0 34 CGATAGC 30 2.5287227E-6 44.0 14 GTTATCG 35 1.4468606E-7 44.0 5 TACGTAA 55 1.8189894E-12 44.0 40 CGTATCT 65 0.0 40.615387 41 TAGACCG 60 3.6379788E-12 40.333332 42 >>END_MODULE