##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527562_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3014863 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.92437367800792 31.0 30.0 31.0 27.0 33.0 2 29.625962440084344 31.0 30.0 31.0 25.0 33.0 3 30.822678178079734 31.0 31.0 33.0 30.0 34.0 4 35.679251760361915 37.0 35.0 37.0 35.0 37.0 5 33.21561444085519 35.0 33.0 35.0 28.0 35.0 6 34.194669210508074 35.0 35.0 35.0 32.0 37.0 7 35.51409433861505 35.0 35.0 37.0 35.0 37.0 8 36.14176597742584 37.0 35.0 37.0 35.0 37.0 9 38.4379973484699 39.0 39.0 39.0 37.0 39.0 10 36.883547610621115 39.0 37.0 39.0 32.0 39.0 11 36.34429756841356 37.0 35.0 39.0 31.0 39.0 12 36.15816705435703 37.0 35.0 39.0 32.0 39.0 13 36.104403417336044 37.0 35.0 39.0 32.0 39.0 14 36.81275268561125 38.0 36.0 40.0 32.0 40.0 15 36.91877110170512 38.0 36.0 40.0 32.0 40.0 16 36.93734275819498 38.0 36.0 40.0 32.0 40.0 17 36.80335856057141 38.0 36.0 40.0 32.0 40.0 18 36.675044935706865 38.0 35.0 40.0 31.0 40.0 19 36.5507746123124 38.0 35.0 40.0 31.0 40.0 20 36.37202950847186 38.0 35.0 40.0 30.0 40.0 21 36.38124286244516 38.0 35.0 40.0 30.0 40.0 22 36.404410747685716 38.0 35.0 40.0 31.0 40.0 23 36.344081306513765 38.0 35.0 40.0 31.0 40.0 24 36.30288706319325 38.0 35.0 40.0 31.0 40.0 25 36.26354796221254 38.0 35.0 40.0 31.0 40.0 26 36.11953810173132 38.0 35.0 40.0 30.0 40.0 27 36.01964832232841 38.0 35.0 40.0 30.0 40.0 28 35.73296066852789 38.0 34.0 40.0 30.0 40.0 29 35.68958788508798 38.0 34.0 40.0 30.0 40.0 30 35.552417141342744 38.0 34.0 40.0 30.0 40.0 31 35.41540759895226 38.0 34.0 39.0 29.0 40.0 32 35.32173800268868 38.0 34.0 39.0 29.0 40.0 33 35.10927561219199 37.0 33.0 39.0 28.0 40.0 34 34.618418482033846 37.0 33.0 39.0 26.0 40.0 35 34.45083010405448 37.0 33.0 39.0 26.0 40.0 36 34.46323332104975 37.0 33.0 39.0 26.0 40.0 37 34.356598624879474 36.0 33.0 39.0 26.0 40.0 38 34.296794580715606 36.0 33.0 39.0 26.0 40.0 39 34.134429989024376 36.0 32.0 39.0 26.0 40.0 40 34.67221760988808 37.0 33.0 39.0 27.0 40.0 41 34.9282803231855 37.0 33.0 39.0 28.0 40.0 42 35.055984301774245 37.0 33.0 40.0 28.0 40.0 43 35.05391521936486 37.0 33.0 40.0 28.0 40.0 44 34.925374055139486 36.0 33.0 40.0 28.0 40.0 45 34.793293426600144 36.0 33.0 39.0 28.0 40.0 46 34.44766843468509 36.0 33.0 39.0 26.0 40.0 47 34.356148521508274 36.0 33.0 39.0 26.0 40.0 48 34.19353317215409 35.0 33.0 39.0 26.0 40.0 49 33.98189668983301 35.0 33.0 39.0 26.0 40.0 50 33.863891991112034 35.0 32.0 39.0 26.0 40.0 51 33.70506852218492 35.0 32.0 38.0 26.0 40.0 52 33.110197047096335 35.0 31.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 17.0 12 54.0 13 87.0 14 157.0 15 241.0 16 413.0 17 740.0 18 1170.0 19 1898.0 20 3070.0 21 4727.0 22 6988.0 23 9962.0 24 14234.0 25 19839.0 26 26569.0 27 36074.0 28 48151.0 29 64270.0 30 85158.0 31 115362.0 32 158773.0 33 228217.0 34 289328.0 35 355908.0 36 504927.0 37 626272.0 38 406816.0 39 5435.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.49762228001737 0.39563986821291713 0.07181089157285091 0.03492696019686467 8 98.72591225538275 1.063166054311589 0.12362087431501863 0.0873008159906437 9 98.28012085457947 1.0323188814881472 0.3286053130772443 0.35895495085514667 10 66.29677700114401 23.52047174282878 3.932848689973641 6.249902566053582 11 35.98107111334744 25.46782391106992 19.383534177174884 19.167570798407755 12 30.709455122836427 17.185092655951532 27.18747087346921 24.91798134774283 13 24.21420144132586 16.940570765570442 30.26137506082366 28.58385273228004 14 25.82611548186435 16.48250683364385 31.014808964785463 26.676568719706335 15 26.2310095019243 16.35281603177325 28.792087733339788 28.62408673296266 16 31.36062899043837 17.02322792113605 25.808635417264398 25.80750767116118 17 32.24773397663509 17.412930537805533 23.047216407511716 27.292119078047662 18 30.709189770812138 19.05237485086387 23.433104588832062 26.805330789491926 19 32.06202072863676 18.87681131779454 21.690571014337966 27.37059693923074 20 30.304030398727903 20.32082386496501 22.523842708607322 26.851303027699768 21 32.321136980353664 18.616335136953154 24.34230013105073 24.720227751642447 22 32.8235147003363 17.543450564752032 23.88612683229719 25.74690790261448 23 32.47613573154071 19.05983787654696 22.956797705235694 25.50722868667664 24 32.53962120335153 18.587776625339195 22.214972952336474 26.6576292189728 25 30.061067451489503 18.61507471483779 22.675358714475582 28.648499119197123 26 29.212471677817533 18.264013986705198 22.810190711816755 29.71332362366051 27 28.438605667985577 18.057570111809394 22.857556048152105 30.646268172052928 28 31.117168508154435 19.751577434861883 21.097774592079308 28.033479464904374 29 31.29249985820251 20.47151064575737 21.006593002733457 27.229396493306663 30 31.090401122704414 18.713487146845477 22.470042585682997 27.726069144767106 31 32.88507636997104 20.033248608643245 20.461792127867835 26.619882893517882 32 35.48277318073823 19.761428628763564 19.834035576409274 24.921762614088934 33 34.887256900230625 18.97127663844095 21.85336448123845 24.288101980089973 34 31.285003663516385 21.306905156221028 23.902644995809098 23.505446184453486 35 30.383636006014203 23.387795730684942 23.887752113445952 22.340816149854902 36 31.49065148233933 22.994378185675433 20.74359597766134 24.771374354323893 37 31.54889625167047 24.009780875615245 19.82614135368672 24.615181519027566 38 32.640687155602095 22.530377002205405 20.676660929534773 24.152274912657724 39 32.40707786721983 21.420873850652583 20.092587955074574 26.079460327053006 40 29.783708248102812 21.31798360323504 21.17747970637472 27.720828442287427 41 27.51955893186523 21.967432682679114 22.05582807576994 28.457180309685715 42 27.14501454958318 19.80415030467388 22.199914224958146 30.85092092078479 43 27.337129415167453 18.613681616710277 25.05161926097471 28.99756970714756 44 27.83257481351557 18.48030905550269 24.22600960640666 29.461106524575083 45 28.930501983008845 18.82387358894915 24.052104523489128 28.19351990455288 46 28.88021777440633 20.783033922271095 23.047647604551187 27.289100698771385 47 27.410864108916392 20.635465027764113 23.931468859447342 28.02220200387215 48 29.164774651451825 20.164664198671716 24.448540447774906 26.222020702101556 49 29.21947033745812 19.770914963631846 24.26362325584944 26.745991443060596 50 26.881685834480706 20.486801556156948 23.68100971752282 28.95050289183953 51 26.10493412138462 21.2311471532869 23.571153979467724 29.092764745860755 52 27.812275383657564 20.34254956195356 24.205179472500078 27.639995581888794 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 5.0 6 10.0 7 13.0 8 16.0 9 16.0 10 16.0 11 271.5 12 527.0 13 960.0 14 1837.5 15 2282.0 16 2232.5 17 2183.0 18 2462.5 19 2742.0 20 2730.5 21 2719.0 22 2984.0 23 3249.0 24 3614.0 25 3979.0 26 4847.0 27 5715.0 28 7039.5 29 8364.0 30 10130.0 31 11896.0 32 12923.5 33 13951.0 34 17205.5 35 20460.0 36 23916.0 37 27372.0 38 29495.5 39 37386.5 40 43154.0 41 44920.5 42 46687.0 43 51485.0 44 56283.0 45 61748.5 46 67214.0 47 78073.5 48 88933.0 49 95071.0 50 101209.0 51 110227.0 52 119245.0 53 135417.0 54 151589.0 55 169615.0 56 187641.0 57 214790.5 58 241940.0 59 280923.0 60 319906.0 61 310315.0 62 300724.0 63 305147.0 64 271072.0 65 232574.0 66 209439.0 67 186304.0 68 154977.0 69 123650.0 70 111577.5 71 99505.0 72 86370.5 73 73236.0 74 72939.0 75 72642.0 76 53631.0 77 34620.0 78 23480.5 79 12341.0 80 8341.5 81 4342.0 82 3089.0 83 1836.0 84 1248.5 85 661.0 86 474.0 87 287.0 88 214.0 89 118.5 90 96.0 91 65.0 92 34.0 93 20.0 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3014863.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.404446087507468 #Duplication Level Percentage of deduplicated Percentage of total 1 68.8475363875732 7.16320480602214 2 9.730237559288565 2.0247546420851625 3 3.508071351355634 1.094986177389275 4 1.7266028263404638 0.718573840847895 5 0.9641843115632511 0.5015901844040176 6 0.6810477247611908 0.42515546011784616 7 0.5331008293494645 0.3882633186720415 8 0.43688353017809656 0.36364249090063583 9 0.3798139194607551 0.3556578103482897 >10 9.218283327051168 25.69476209507229 >50 2.566858624210064 18.199134584336626 >100 1.2944437139681488 25.66127587522475 >500 0.07038497699149439 5.006716119006578 >1k 0.038071873918126505 7.818446082814614 >5k 0.0028793854223793155 1.8901093987728972 >10k+ 0.0015996585679885088 2.69372711398503 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGGTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 20435 0.677808577039819 No Hit GTGGTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 19047 0.6317700008259082 No Hit GTGGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 17414 0.5776050188681874 No Hit GTGGTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 13399 0.4444314716788126 No Hit GTGGTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 10629 0.3525533332692066 No Hit GTGGTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 8833 0.29298180381662453 No Hit GTGGTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6897 0.22876661393900818 No Hit GTGGTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 6323 0.2097276061963678 No Hit GTGGTAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 6109 0.2026294395466726 No Hit GTGGTAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 6066 0.20120317241612637 No Hit GTGGTAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 5857 0.19427085078161097 No Hit GTGGTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 5776 0.1915841615356983 No Hit GTGGTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5602 0.18581275500744146 No Hit GTGGTAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 5319 0.1764259271482651 No Hit GTGGTAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4901 0.1625612838792343 No Hit GTGGTAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 4878 0.16179839680940725 No Hit GTGGTAGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAG 4373 0.14504805027624804 No Hit GTGGTAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 4218 0.1399068548056744 No Hit GTGGTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4120 0.13665629250815045 No Hit GTGGTAGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAAGA 3960 0.13134925202239703 No Hit GTGGTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 3885 0.12886157679470012 No Hit GTGGTAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 3720 0.12338869129376691 No Hit GTGGTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 3586 0.11894404488694843 No Hit GTGGTAGGGGTATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 3565 0.1182474958231933 No Hit GTGGTAGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 3170 0.10514573962398954 No Hit GTGGTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 3108 0.10308926143576011 No Hit GTGGTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3107 0.10305609243272415 No Hit GTGGTAGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3107 0.10305609243272415 No Hit GTGGTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 3098 0.10275757140540051 No Hit GTGGTAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 3092 0.10255855738718475 No Hit GTGGTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3076 0.1020278533386094 No Hit GTGGTAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCATCA 3058 0.10143081128396216 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.032737805996491384 0.0 0.0 0.0 0.0 7 0.03379921409364207 0.0 0.0 0.0 0.0 8 0.03389872110274994 0.0 0.0 0.0 0.0 9 0.03419724213007357 0.0 0.0 0.0 0.0 10 0.04059885971601363 0.0 0.0 0.0 0.0 11 0.05744871325828072 0.0 0.0 0.0 0.0 12 0.06451371090493996 0.0 0.0 0.0 0.0 13 0.07041779344534063 0.0 0.0 0.0 0.0 14 0.07831201616789885 0.0 0.0 0.0 0.0 15 0.08517799979634232 0.0 0.0 0.0 0.0 16 0.09151327937621045 0.0 0.0 0.0 0.0 17 0.09658813684071217 0.0 0.0 0.0 0.0 18 0.10189517732646558 0.0 0.0 0.0 0.0 19 0.10803144288811797 0.0 0.0 0.0 0.0 20 0.11413453944673439 0.0 0.0 0.0 0.0 21 0.1192093969112361 0.0 0.0 0.0 0.0 22 0.12398573334841417 0.0 0.0 0.0 0.0 23 0.12925960483113164 0.0 0.0 0.0 0.0 24 0.1350973493654604 0.0 0.0 0.0 0.0 25 0.14057023486639358 0.0 0.0 0.0 0.0 26 0.1461426273764347 0.0 0.0 0.0 0.0 27 0.153141287017022 0.0 0.0 0.0 0.0 28 0.1641865650279963 0.0 0.0 0.0 0.0 29 0.1699911405592891 0.0 0.0 0.0 0.0 30 0.17874775736078224 0.0 0.0 0.0 0.0 31 0.18544789597404593 0.0 0.0 0.0 0.0 32 0.1940054987573233 0.0 0.0 0.0 0.0 33 0.19917986323093287 0.0 0.0 0.0 0.0 34 0.20737260698081472 0.0 0.0 0.0 0.0 35 0.22150260227413318 0.0 0.0 0.0 0.0 36 0.23115478215759722 0.0 0.0 0.0 0.0 37 0.2384187938224722 0.0 0.0 0.0 0.0 38 0.24561646748127527 0.0 0.0 0.0 0.0 39 0.2525819581188266 0.0 0.0 0.0 0.0 40 0.2596137867624499 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTATA 20 6.313092E-4 46.000004 31 CCGAATA 25 3.4184857E-5 46.0 39 TGGTAGG 308830 0.0 44.186543 2 TAGGGGG 72390 0.0 44.17309 5 TAGGGGA 58480 0.0 44.15937 5 GTAGGGA 72445 0.0 44.1459 4 GTAGGGG 201855 0.0 44.12108 4 GGTAGGG 304670 0.0 44.093082 3 TAGGGAT 21290 0.0 44.044624 5 GTGGTAG 313500 0.0 44.016937 1 AGGGATA 3040 0.0 43.80592 6 TAGGGAG 28135 0.0 43.711037 5 TAGGGGT 29390 0.0 43.65226 5 TAGGGGC 42230 0.0 43.641724 5 AGGGGGG 27960 0.0 43.35944 6 GTAGGGC 19250 0.0 42.98909 4 AGGGGAG 28720 0.0 42.940807 6 GTAGGGT 11765 0.0 42.676586 4 TAGGGAA 11750 0.0 42.652767 5 AGGGATT 7900 0.0 42.535442 6 >>END_MODULE