##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527556_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2207663 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality warn #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.578023004416888 31.0 30.0 33.0 28.0 33.0 2 28.681722708583692 30.0 28.0 31.0 25.0 33.0 3 30.794099914706184 31.0 30.0 33.0 28.0 33.0 4 35.26944918676447 35.0 35.0 37.0 33.0 37.0 5 35.666128843034464 37.0 35.0 37.0 35.0 37.0 6 35.93497286497079 37.0 35.0 37.0 35.0 37.0 7 36.31019861274117 37.0 35.0 37.0 35.0 37.0 8 36.14187219697934 37.0 35.0 37.0 35.0 37.0 9 33.56335047514045 35.0 33.0 35.0 30.0 35.0 10 29.884607387993547 33.0 26.0 35.0 18.0 37.0 11 30.158204852824003 33.0 25.0 35.0 21.0 39.0 12 32.06539856853152 33.0 31.0 35.0 22.0 39.0 13 32.49857337827377 35.0 31.0 35.0 23.0 39.0 14 33.32489741414337 35.0 32.0 35.0 27.0 40.0 15 33.48226472971645 35.0 33.0 35.0 27.0 40.0 16 33.63417333170869 35.0 33.0 35.0 27.0 40.0 17 33.86866111358482 35.0 33.0 35.0 29.0 40.0 18 33.70609418194715 35.0 33.0 35.0 29.0 40.0 19 33.692631982327015 35.0 33.0 35.0 27.0 40.0 20 33.77281677502409 35.0 33.0 35.0 29.0 40.0 21 33.82960352191435 35.0 33.0 36.0 29.0 39.0 22 33.561745157662195 35.0 33.0 35.0 29.0 38.0 23 32.91994475606105 35.0 33.0 35.0 27.0 36.0 24 32.77712404474777 35.0 33.0 35.0 25.0 35.0 25 32.67933103920299 35.0 33.0 35.0 25.0 35.0 26 32.55688164362043 35.0 33.0 35.0 24.0 35.0 27 32.41064963266586 35.0 33.0 35.0 23.0 35.0 28 32.133822055268396 35.0 33.0 35.0 23.0 35.0 29 31.81342442211515 35.0 32.0 35.0 21.0 35.0 30 31.085243535811397 35.0 31.0 35.0 20.0 35.0 31 30.514877950121917 34.0 30.0 35.0 18.0 35.0 32 30.27404273206554 34.0 29.0 35.0 17.0 35.0 33 29.978228561152676 34.0 29.0 35.0 15.0 35.0 34 29.620099172745114 34.0 27.0 35.0 14.0 35.0 35 29.08170721708884 34.0 25.0 35.0 10.0 35.0 36 28.333329860581077 33.0 23.0 35.0 9.0 35.0 37 27.49976694812569 33.0 20.0 35.0 8.0 35.0 38 26.819229655975573 33.0 18.0 35.0 8.0 35.0 39 26.258439807162596 33.0 15.0 35.0 8.0 35.0 40 25.9514405051858 33.0 14.0 35.0 8.0 35.0 41 25.8083602433886 33.0 10.0 35.0 8.0 35.0 42 25.70564257316447 33.0 10.0 35.0 8.0 35.0 43 25.634012528180254 33.0 10.0 35.0 8.0 35.0 44 25.485401530940184 33.0 10.0 35.0 8.0 35.0 45 25.41240488244809 33.0 10.0 35.0 8.0 35.0 46 25.18251970522675 33.0 10.0 35.0 8.0 35.0 47 25.07032776288772 33.0 10.0 35.0 8.0 35.0 48 24.89573318029065 33.0 10.0 35.0 8.0 35.0 49 24.719585371499182 33.0 10.0 35.0 8.0 35.0 50 24.442550334901657 32.0 10.0 35.0 8.0 35.0 51 24.157896381830017 32.0 9.0 35.0 8.0 35.0 52 23.49533692415917 31.0 9.0 35.0 8.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 16.0 11 31.0 12 62.0 13 131.0 14 500.0 15 1663.0 16 4377.0 17 8198.0 18 12939.0 19 17983.0 20 24845.0 21 34625.0 22 48701.0 23 67161.0 24 92643.0 25 124337.0 26 150550.0 27 142721.0 28 108919.0 29 90273.0 30 102684.0 31 131280.0 32 182377.0 33 331142.0 34 376698.0 35 51290.0 36 38717.0 37 30200.0 38 30418.0 39 2181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.59380711639413 1.0464912443611185 0.1990792978819684 0.16062234136278952 8 94.4110582095184 4.35908922693364 0.6813992896560752 0.5484532738918938 9 77.11294703947115 18.372324036775538 2.655568354409165 1.8591605693441438 10 30.8254475433977 50.67041482327692 6.100161120605817 12.40397651271956 11 18.86275215012436 60.27165378049095 10.411462256694069 10.454131812690616 12 30.735533457778658 45.97875672147425 13.654665589811488 9.63104423093561 13 18.949268978100374 46.588904194163696 21.235351591252833 13.226475236483104 14 26.31755843169904 46.96328198642637 14.380772790049932 12.338386791824659 15 18.98759004431383 46.69036895576906 15.552283115674811 18.769757884242296 16 21.917838003354678 50.77921766139125 15.186828786821177 12.11611554843289 17 25.90812094056022 45.77492126289203 13.212614425299513 15.104343371248238 18 20.87619351323096 48.805093893406735 18.088222704280497 12.230489889081802 19 25.535917393189088 45.68727201570167 15.450682463763718 13.326128127345523 20 19.404682689341627 42.79403151658564 19.238534142212828 18.56275165185991 21 19.9384598102156 42.7674423134328 23.678704584893616 13.61539329145798 22 16.260588685863738 46.377232394618204 21.096199918194035 16.265979001324023 23 16.913677495161174 53.612349348609825 17.8632336547743 11.610739501454706 24 19.970937593283033 53.52655726893099 16.485079470915625 10.017425666870352 25 28.17096631143431 50.04608946202387 10.772069831310304 11.010874395231518 26 30.38108624368846 48.4668176256974 10.265561365117774 10.886534765496364 27 34.49108854023463 42.984096757521414 10.755672401086578 11.769142301157377 28 35.404044910840106 43.26317014870476 9.982773638911373 11.35001130154376 29 34.046274272839646 44.62664817954552 10.24517781925955 11.08189972835528 30 28.60232743856286 49.210952939828225 10.190368729285222 11.996350892323694 31 24.770990862282876 53.22809686079805 10.898357222094134 11.102555054824943 32 21.506226267324315 56.16350865145632 11.620115932549488 10.710149148669883 33 19.493373762209178 57.60933620756429 11.579031763453026 11.318258266773507 34 17.922436531300292 58.48007598985896 12.095460221963226 11.502027256877522 35 19.954313679216437 57.1754384613956 11.708761708648467 11.161486150739492 36 21.75282187544023 54.39109139393105 11.940137602523574 11.91594912810515 37 23.746559144217212 51.61358413852114 12.299340977314019 12.340515739947627 38 25.035297506911153 49.402965941812674 11.958165716415957 13.603570834860212 39 26.16880384370259 46.718317061979114 12.697227792466514 14.415651301851778 40 26.114357127876854 46.144089926768714 13.627170451287176 14.114382494067257 41 25.7506693729976 46.19799308137157 13.752280126088085 14.299057419542747 42 25.467564569411184 46.25959668663197 13.688955243621875 14.58388350033497 43 25.414295569568363 45.89255697087825 13.915076712342417 14.778070747210965 44 25.380730664055157 45.42889924775657 13.758712267225567 15.43165782096271 45 25.5237778592113 44.737081701328506 14.048068024875175 15.691072414585017 46 24.53060091146158 44.79234375898858 14.137936813725647 16.5391185158242 47 23.231987853218538 44.40890661301113 14.935159940624995 17.423945593145334 48 22.229932738828346 43.964907687450484 16.0815305596914 17.72362901402977 49 20.969867230641633 43.58042871579585 17.069136004906547 18.380568048655977 50 19.79183417034212 43.20179302728723 17.88384368447539 19.122529117895258 51 19.74599384054541 42.35429048727093 18.52950382372672 19.370211848456943 52 20.305499525969317 40.50640881330167 19.4317248601802 19.756366800548815 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 162.5 6 325.0 7 1479.5 8 2634.0 9 6569.0 10 10504.0 11 11910.5 12 13317.0 13 10322.0 14 7515.0 15 7703.0 16 9073.5 17 10444.0 18 12537.5 19 14631.0 20 18004.5 21 21378.0 22 26832.5 23 32287.0 24 40677.0 25 49067.0 26 59797.0 27 70527.0 28 82531.5 29 94536.0 30 106536.5 31 118537.0 32 135460.5 33 152384.0 34 177499.0 35 202614.0 36 200560.5 37 198507.0 38 166691.0 39 115068.0 40 95261.0 41 88440.5 42 81620.0 43 81749.5 44 81879.0 45 79029.0 46 76179.0 47 67965.0 48 59751.0 49 57965.5 50 56180.0 51 58772.5 52 61365.0 53 68497.5 54 75630.0 55 77012.0 56 78394.0 57 80026.0 58 81658.0 59 81130.5 60 80603.0 61 69348.5 62 58094.0 63 52834.0 64 40943.0 65 34312.0 66 31715.0 67 29118.0 68 25236.5 69 21355.0 70 18180.0 71 15005.0 72 13436.0 73 11867.0 74 11850.5 75 11834.0 76 9013.0 77 6192.0 78 3727.5 79 1263.0 80 922.5 81 582.0 82 414.0 83 246.0 84 146.5 85 47.0 86 36.0 87 25.0 88 21.0 89 14.0 90 11.0 91 7.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2207663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.700413367494946 #Duplication Level Percentage of deduplicated Percentage of total 1 84.66715788331928 30.226525350854573 2 7.166241987758383 5.116756025089459 3 2.483981467940565 2.6603749560802523 4 1.1640898073932207 1.6623394928330222 5 0.7019058565307915 1.2529164611607433 6 0.4814352336793009 1.031246211121654 7 0.36791780382689876 0.9194372377316841 8 0.27079229423278867 0.77339174726743 9 0.23497925841476333 0.754997099237502 >10 1.8843595251717828 14.517363701740383 >50 0.35882353912712156 8.847121234104826 >100 0.19302217411387845 13.05776086652329 >500 0.015712422850680044 3.8694826290410704 >1k 0.00740910996210929 4.518348823247137 >5k 0.0011496894768790275 2.7227479893649704 >10k+ 0.0010219462016702468 8.06919017460211 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAAGGGGGGGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAAA 40256 1.8234667157079683 No Hit TAAGGGGGGGAGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAAAA 33428 1.5141803798858793 No Hit TAAGGGGGGCAGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAA 25879 1.1722350739220615 No Hit TAAGGGGGGCAGAGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAA 23169 1.0494808310869912 No Hit TAAGGGGGGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAA 15142 0.6858836697448841 No Hit TAAGGGGGGAGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAA 14546 0.6588867956748834 No Hit TAAGGGGGGAGAGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAAA 12533 0.5677044005357702 No Hit TAAGGGGGGAGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAA 11984 0.5428364745887393 No Hit TAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8515 0.38570198440613446 No Hit TAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 8235 0.37301888920546294 No Hit TAAGGGGGGGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAA 7268 0.32921691399457254 No Hit TAAGGGGGGGCAGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAA 7098 0.321516463337022 No Hit TAAGGGGGGGCAGAGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAA 6861 0.3107811291850251 No Hit TAAGGGGGGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 5769 0.2613170579024063 No Hit TAAGGGGGGGTGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAA 5608 0.2540242781620202 No Hit TAAGGGGGGGAGTGCAGTGCTTAAGGGGAAAAAAAAAAAAAAAAAAAAAAAA 5268 0.23862337684691912 No Hit TAAGGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 5081 0.23015288112361354 Illumina Single End Adapter 2 (97% over 34bp) TAAGGGGGGGAGTGCAGTGCTTAAGGGGGGTAAAAAAAAAAAAAAAAAAAAA 4770 0.2160655860971534 No Hit TAAGGGGGGCAGAGTGCAGTGCTTAAGGGGAAAAAAAAAAAAAAAAAAAAAA 3882 0.17584205560359528 No Hit TAAGGGGGGCAGTGCTTAAGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3711 0.16809630817747093 No Hit TAAGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 3551 0.16084882520565866 Illumina Single End Adapter 2 (97% over 34bp) TAAGGGGGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAA 3057 0.13847222153018826 Illumina Single End Adapter 2 (97% over 34bp) TAAGGGGGGCAGAGTGCAGTGCTTAAGGGGGGTAAAAAAAAAAAAAAAAAAA 2962 0.13416902851567472 No Hit TAAGGGGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTAAGGGGGGAAG 2700 0.12230127514933212 No Hit TAAGGGGGGAGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAA 2343 0.10613032876847599 Illumina Single End Adapter 2 (100% over 34bp) TAAGGGGGAGAGTGCAGTGCTTAAGGGGGGAAAAAAAAAAAAAAAAAAAAAA 2342 0.10608503199990216 No Hit TAAGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 2340 0.1059944384627545 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.02133477799827238 0.0 0.0 0.0 0.0 8 0.07650624212119332 0.0 0.0 0.0 0.0 9 0.1891140087957265 0.0 0.0 0.0 0.0 10 0.4538283243411698 0.0 0.0 0.0 0.0 11 0.8034287841939644 0.0 0.0 0.0 0.0 12 0.996166534475597 0.0 0.0 0.0 0.0 13 1.1387154651774296 0.0 0.0 0.0 0.0 14 1.3010590837460247 0.0 0.0 0.0 0.0 15 1.4613190509602236 0.0 0.0 0.0 0.0 16 1.6367534356466544 0.0 0.0 0.0 0.0 17 1.785825101023118 0.0 0.0 0.0 0.0 18 1.9532872544405555 0.0 0.0 0.0 0.0 19 2.125867942706835 0.0 0.0 0.0 0.0 20 2.2928318316699605 0.0 0.0 0.0 0.0 21 2.4582556305015757 0.0 0.0 0.0 0.0 22 2.6519446129232587 0.0 0.0 0.0 0.0 23 2.8663795153517544 0.0 0.0 0.0 0.0 24 3.0900096618007367 0.0 0.0 0.0 0.0 25 3.2817508831737454 0.0 0.0 0.0 4.5296768573826714E-5 26 3.4585441709173907 0.0 0.0 0.0 4.5296768573826714E-5 27 3.6169922673886368 0.0 0.0 0.0 4.5296768573826714E-5 28 3.7661092295336744 0.0 0.0 0.0 4.5296768573826714E-5 29 3.8734625710536434 0.0 0.0 0.0 4.5296768573826714E-5 30 4.005230870834906 0.0 0.0 0.0 4.5296768573826714E-5 31 4.128075707207124 0.0 0.0 0.0 4.5296768573826714E-5 32 4.2453490410447605 0.0 0.0 0.0 4.5296768573826714E-5 33 4.368012690342684 0.0 0.0 0.0 4.5296768573826714E-5 34 4.503087654229835 0.0 0.0 0.0 4.5296768573826714E-5 35 4.650256855326198 0.0 0.0 0.0 9.059353714765343E-5 36 4.7739170335327445 0.0 0.0 0.0 9.059353714765343E-5 37 4.902741043356708 0.0 0.0 0.0 9.059353714765343E-5 38 5.040941484275454 0.0 0.0 0.0 9.059353714765343E-5 39 5.189197807817588 0.0 0.0 0.0 9.059353714765343E-5 40 5.346015220620176 0.0 0.0 0.0 9.059353714765343E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTA 35 1.0201438E-7 46.000004 16 ATCGTTC 35 1.0201438E-7 46.000004 22 TTACGTC 35 1.0201438E-7 46.000004 19 TACGTCG 35 1.0201438E-7 46.000004 40 ATAATAG 30 1.8621886E-6 46.0 35 TAGGTCG 20 6.3127256E-4 46.0 42 CACATCG 25 3.4181863E-5 46.0 12 TACGGAC 55 1.8189894E-12 46.0 13 TTGCGAC 100 0.0 46.0 13 ACGCTAG 25 3.4181863E-5 46.0 12 ATAACCG 85 0.0 46.0 31 CGGTCGA 20 6.3127256E-4 46.0 26 TTACCGT 30 1.8621886E-6 46.0 45 CTAGGCG 25 3.4181863E-5 46.0 28 CGATAAA 25 3.4181863E-5 46.0 24 CCGCATA 20 6.3127256E-4 46.0 19 TACGGTC 45 3.110472E-10 45.999996 18 ATTGCGA 105 0.0 43.809525 12 CGTATAT 90 0.0 43.444443 36 TAACCGT 90 0.0 43.444443 32 >>END_MODULE