##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527555_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2089112 Sequences flagged as poor quality 0 Sequence length 50 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.851014689494868 30.0 25.0 31.0 16.0 33.0 2 30.59850931879191 31.0 30.0 33.0 28.0 33.0 3 27.618664772400905 28.0 25.0 30.0 23.0 31.0 4 33.95021808308985 35.0 33.0 35.0 32.0 35.0 5 34.9165674219477 35.0 35.0 35.0 35.0 37.0 6 34.29869006544408 35.0 33.0 35.0 32.0 37.0 7 35.7841800726816 36.0 35.0 37.0 35.0 37.0 8 36.525794213043625 37.0 37.0 37.0 35.0 37.0 9 38.63333368435967 39.0 39.0 39.0 38.0 39.0 10 37.47355862203654 39.0 37.0 39.0 35.0 39.0 11 37.168944987152436 39.0 37.0 39.0 34.0 39.0 12 37.03851540750328 39.0 37.0 39.0 34.0 39.0 13 37.08663298090289 39.0 37.0 39.0 34.0 39.0 14 37.87556866266624 40.0 38.0 40.0 34.0 40.0 15 37.878981117335975 40.0 38.0 40.0 34.0 40.0 16 38.027026315487156 40.0 38.0 40.0 34.0 40.0 17 37.903917549657464 40.0 37.0 40.0 34.0 40.0 18 37.7672269366123 39.0 37.0 40.0 34.0 40.0 19 37.714301100180364 39.0 37.0 40.0 34.0 40.0 20 37.54027835750309 39.0 37.0 40.0 33.0 40.0 21 37.42897221403161 39.0 36.0 40.0 33.0 40.0 22 37.2183200326263 38.0 36.0 40.0 33.0 40.0 23 37.03027745759921 38.0 36.0 40.0 33.0 40.0 24 36.88486974369972 38.0 36.0 40.0 33.0 40.0 25 36.684474073194735 38.0 35.0 40.0 32.0 40.0 26 36.050182565606825 38.0 35.0 39.0 31.0 40.0 27 35.900202095435766 38.0 34.0 39.0 31.0 40.0 28 35.75227082128675 37.0 34.0 39.0 31.0 40.0 29 35.401545249847786 37.0 34.0 38.0 30.0 40.0 30 35.08757165724001 36.0 34.0 38.0 30.0 40.0 31 34.92578904338303 36.0 33.0 38.0 30.0 40.0 32 34.878989254764704 36.0 33.0 38.0 30.0 39.0 33 34.3501095202172 36.0 33.0 38.0 29.0 39.0 34 33.83694316053902 35.0 32.0 38.0 27.0 39.0 35 33.70229504210401 35.0 32.0 38.0 27.0 39.0 36 33.31447428381054 35.0 31.0 38.0 26.0 38.0 37 33.108870180248836 34.0 31.0 37.0 26.0 38.0 38 32.6538036256553 34.0 31.0 37.0 25.0 38.0 39 31.814323023370694 33.0 30.0 36.0 23.0 38.0 40 31.51987734501549 33.0 29.0 36.0 23.0 38.0 41 31.178082840939116 33.0 29.0 36.0 23.0 38.0 42 30.87902563385783 32.0 29.0 35.0 23.0 38.0 43 30.369497183492317 32.0 28.0 35.0 22.0 37.0 44 29.87839474379545 31.0 27.0 34.0 21.0 37.0 45 29.345753123815285 31.0 26.0 34.0 20.0 37.0 46 29.214293441423916 31.0 26.0 34.0 20.0 37.0 47 28.650055143046423 30.0 26.0 34.0 19.0 36.0 48 28.111429162246925 30.0 24.0 33.0 18.0 36.0 49 27.37959525386863 29.0 24.0 33.0 17.0 35.0 50 31.264696674950887 33.0 29.0 35.0 23.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 7.0 13 5.0 14 21.0 15 69.0 16 150.0 17 301.0 18 564.0 19 968.0 20 1491.0 21 2455.0 22 3799.0 23 5910.0 24 8658.0 25 12477.0 26 17755.0 27 25314.0 28 35258.0 29 49485.0 30 69000.0 31 98871.0 32 153135.0 33 213689.0 34 340329.0 35 585074.0 36 424116.0 37 39290.0 38 920.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 100.0 0.0 0.0 7 99.68374122593714 0.25460578465874495 0.05006912027694063 0.011583869127169822 8 98.99971854070054 0.8989465380506166 0.08726195627615944 0.014072964972677387 9 98.4464212545809 0.95432892061316 0.19371867089940606 0.40553115390654026 10 63.67250774491746 27.083564691601026 3.4584072084215682 5.785520355059949 11 35.51619061113047 25.837820088152284 19.867867304385786 18.778121996331457 12 29.483675360631693 18.189977368374695 26.685452958003207 25.640894312990397 13 24.943612405653695 17.30553460034694 29.641158540087847 28.109694453911516 14 26.071603628718805 17.68607906134281 30.455475819391204 25.78684149054718 15 25.440378495743648 17.52859588188666 28.88490420810373 28.146121414265966 16 30.720755995848954 17.497242847678823 25.437697930986946 26.344303225485277 17 31.214267114448628 18.389823044432276 23.79417666453498 26.60173317658412 18 28.87987814918492 18.6314568103577 23.64435224152654 28.844312798930837 19 29.962969912575293 19.062501196680696 23.47102500966918 27.50350388107483 20 29.278995094566497 21.816542148051422 21.965887898781876 26.938574858600212 21 30.516889472656324 19.42691440190856 24.429614113556383 25.626582011878728 22 30.778771075940398 18.50953898115563 24.156962384017707 26.554727558886267 23 29.755465480070004 19.31471361994953 23.702127985479 27.22769291450147 24 29.775761184656446 19.924972907149066 22.882066638839852 27.417199269354636 25 30.112746468355933 19.774526210179253 22.503963406461693 27.60876391500312 26 29.123474471450074 19.46171387651787 22.28913528810327 29.125676363928786 27 28.13013376018136 18.36311313132087 22.764887665189804 30.74186544330797 28 30.781643109608293 19.768638541160072 21.50420848666802 27.94550986256362 29 31.320628094616275 20.507325600542238 21.014526746292205 27.157519558549275 30 29.655040036149334 19.175611455967896 22.968706321154635 28.200642186728142 31 32.238386453191595 20.17306874882725 21.052437590708397 26.536107207272757 32 32.968457411570085 20.38320587886145 21.91720692811108 24.731129781457383 33 33.87893995152007 19.5417478813965 21.430062150808574 25.14925001627486 34 30.40636404367023 21.95262867668177 23.883209708239672 23.757797571408332 35 29.650301180597303 23.48370982503571 23.801021678110125 23.06496731625686 36 30.94927414135767 22.90035191985877 20.977142441381794 25.173231497401765 37 29.955359023355378 24.044187195325094 20.907112687112996 25.093341094206533 38 32.202198828976144 22.68207736109888 20.457639418087687 24.6580843918373 39 31.793125500212533 21.246826402796977 20.686779837557776 26.273268259432715 40 30.129356396401917 21.583715952040865 21.82645066420565 26.460476987351562 41 27.809471201161067 22.588544797981154 22.468062985613027 27.133921015244756 42 27.879836026024456 19.956230206901303 22.735592921777293 29.428340845296947 43 27.328261960105536 18.919186716652817 25.68229946503586 28.070251858205786 44 27.538351222911935 18.30466724617924 24.768705555278988 29.388275975629835 45 28.027506423781972 19.468654624548613 24.339575858067924 28.164263093601495 46 28.710045224956826 20.319542465889814 23.070472047453656 27.899940261699708 47 27.996488460168724 21.493246891502228 23.69322468110853 26.817039967220524 48 28.42466081282382 21.994656102688605 24.250973619413415 25.329709465074156 49 28.629197477205626 20.788354094945603 23.916094493737052 26.66635393411172 50 26.720060963701325 21.392629978670364 24.048208042460146 27.839101015168165 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 2.0 2 4.0 3 5.0 4 6.0 5 11.5 6 17.0 7 232.0 8 447.0 9 857.5 10 1268.0 11 1692.5 12 2117.0 13 1962.5 14 1808.0 15 2079.0 16 2350.0 17 2665.0 18 2980.0 19 3078.0 20 3176.0 21 4338.0 22 5500.0 23 5893.5 24 6287.0 25 7223.0 26 8159.0 27 8723.0 28 9287.0 29 12248.0 30 15209.0 31 16347.0 32 17485.0 33 20170.5 34 22856.0 35 26461.0 36 30066.0 37 33305.0 38 36544.0 39 39714.0 40 42884.0 41 49409.5 42 55935.0 43 61156.0 44 66377.0 45 73990.5 46 81604.0 47 89597.5 48 97591.0 49 101937.5 50 106284.0 51 126802.0 52 147320.0 53 173163.0 54 199006.0 55 205406.0 56 211806.0 57 208407.0 58 205008.0 59 207904.5 60 210801.0 61 181461.5 62 152122.0 63 130271.0 64 108420.0 65 90484.5 66 72549.0 67 65274.0 68 57999.0 69 48994.5 70 39990.0 71 42131.5 72 44273.0 73 29987.0 74 15701.0 75 9988.5 76 4276.0 77 3568.0 78 2860.0 79 1722.0 80 584.0 81 351.5 82 119.0 83 70.0 84 21.0 85 16.0 86 11.0 87 8.0 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2089112.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.24441966676047 #Duplication Level Percentage of deduplicated Percentage of total 1 69.94258304000113 7.165211732390148 2 9.892436324416094 2.026845384680478 3 3.558197312860682 1.0935499959025268 4 1.7147634499262068 0.7026702564106426 5 0.9413183051992611 0.48216298792324713 6 0.6064924604550475 0.372789797377658 7 0.45342696979422564 0.3251567316759699 8 0.3334718317502355 0.27329803131942004 9 0.30374005540790433 0.28004765374832846 >10 7.736578593383478 22.272163847168244 >50 3.011957624459296 21.18918516644549 >100 1.3935500299503993 27.26480778618732 >500 0.06991369641785056 4.909675671563856 >1k 0.037318797412231035 7.6695625507028335 >5k 0.002361949203305762 1.6217662474786152 >10k+ 0.0018895593626446095 2.3511061590252313 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AGTTTAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 16551 0.792250487288379 No Hit AGTTTAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 11229 0.5375011009462394 No Hit AGTTTAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 10456 0.5004997338582134 No Hit AGTTTAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 10347 0.49528220602820716 No Hit AGTTTAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 7739 0.37044447593044316 No Hit AGTTTAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 7670 0.3671416372123658 No Hit AGTTTAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 6337 0.30333462255733534 No Hit AGTTTAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5961 0.2853365449052037 No Hit AGTTTAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 5805 0.27786925736868107 No Hit AGTTTAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 4653 0.22272621094512884 No Hit AGTTTAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 4450 0.21300916370208967 No Hit AGTTTAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 4217 0.20185609962510387 No Hit AGTTTAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 4099 0.19620776674491364 No Hit AGTTTAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 4060 0.19434094486078296 No Hit AGTTTAGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 4043 0.1935272019882132 No Hit AGTTTAGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 3778 0.18084238662168423 No Hit AGTTTAGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 3691 0.17667793780323887 No Hit AGTTTAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 3680 0.17615139829745843 No Hit AGTTTAGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 3613 0.17294429403497755 No Hit AGTTTAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 3513 0.1681575712551553 No Hit AGTTTAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3493 0.16720022669919085 No Hit AGTTTAGGGGCTCTTTTCCTCTGGCGCGCCACCGACGATCCTATTGTCAT 3429 0.16413672412010463 No Hit AGTTTAGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 3080 0.14743106161852498 No Hit AGTTTAGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCC 3062 0.146569451518157 No Hit AGTTTAGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2980 0.14264433883870276 No Hit AGTTTAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 2978 0.14254860438310632 No Hit AGTTTAGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2808 0.1344111756574085 No Hit AGTTTAGGGGACCTTGCCTGCGCCCGCGCGAGCTTAGCAGATCTCCACTT 2793 0.13369316724043517 No Hit AGTTTAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 2753 0.13177847812850627 No Hit AGTTTAGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2603 0.12459839395877292 No Hit AGTTTAGGGGCTCTTTCCTTTTGCGGCCATCGGTGGATCGCAGCCGCCAA 2464 0.11794484929482 No Hit AGTTTAGGGGCTTTTCCTCAGCTGCCGCCAAGGTGCTCGGTCCTTCCGAG 2429 0.11626949632188222 No Hit AGTTTAGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 2401 0.11492921394353199 No Hit AGTTTAGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 2340 0.11200931304784043 No Hit AGTTTAGGGGATCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCGTGGT 2329 0.11148277354205997 No Hit AGTTTAGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 2261 0.10822780205178084 No Hit AGTTTAGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTC 2260 0.10817993482398264 No Hit AGTTTAGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 2175 0.10411122046113373 No Hit AGTTTAGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 2139 0.10238800026039771 No Hit AGTTTAGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATCC 2096 0.10032970946507415 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.015461114578825836 0.0 0.0 0.0 0.0 7 0.015604716262220503 0.0 0.0 0.0 0.0 8 0.016226990223597394 0.0 0.0 0.0 0.0 9 0.017423670918552955 0.0 0.0 0.0 0.0 10 0.032836918269580566 0.0 0.0 0.0 0.0 11 0.05739280613006866 0.0 0.0 0.0 0.0 12 0.07113070050815849 0.0 0.0 0.0 0.0 13 0.08137428725697808 0.0 0.0 0.0 0.0 14 0.09334109420653368 0.0 0.0 0.0 0.0 15 0.10435055660012484 0.0 0.0 0.0 0.0 16 0.11435480720995332 0.0 0.0 0.0 0.0 17 0.12273157207464223 0.0 0.0 0.0 0.0 18 0.12952871842198982 0.0 0.0 0.0 0.0 19 0.14053818081558098 0.0 0.0 0.0 0.0 20 0.1495372196416468 0.0 0.0 0.0 0.0 21 0.15954147025147528 0.0 0.0 0.0 0.0 22 0.16696089056019975 0.0 0.0 0.0 0.0 23 0.1771087428534229 0.0 0.0 0.0 0.0 24 0.1865385867296727 0.0 0.0 0.0 0.0 25 0.1970215096174834 0.0 0.0 0.0 0.0 26 0.2065949551771279 0.0 0.0 0.0 0.0 27 0.21746081588732438 0.0 0.0 0.0 0.0 28 0.23531529185606134 0.0 0.0 0.0 0.0 29 0.24522380801029336 0.0 0.0 0.0 0.0 30 0.2561854031760863 0.0 0.0 0.0 0.0 31 0.26695552943068634 0.0 0.0 0.0 0.0 32 0.27935314143042594 0.0 0.0 0.0 0.0 33 0.2866289600557557 0.0 0.0 0.0 0.0 34 0.29711188294356644 0.0 0.0 0.0 0.0 35 0.3121421924722083 0.0 0.0 0.0 0.0 36 0.3254492818001141 0.0 0.0 0.0 0.0 37 0.3354056651821444 0.0 0.0 0.0 0.0 38 0.34651086203133197 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATT 20 7.857961E-4 44.000004 29 CCGTATA 25 4.4440952E-5 44.0 29 ATATCGT 45 4.802132E-10 44.0 23 GAACGTA 50 2.7284841E-11 44.0 10 CGGTATA 25 4.4440952E-5 44.0 18 GTACGAT 30 2.5287154E-6 44.0 19 ACGGTAT 25 4.4440952E-5 44.0 17 TAGGGAT 16550 0.0 42.989727 5 TAGGGGC 26810 0.0 42.98247 5 TAGGGGA 39520 0.0 42.95901 5 AGTTTAG 213845 0.0 42.852905 1 TTAGGGG 133155 0.0 42.850063 4 TTTAGGG 208750 0.0 42.836502 3 GTTTAGG 211925 0.0 42.825905 2 TAGGGGG 47410 0.0 42.607887 5 AGGGATT 5530 0.0 42.488247 6 TAGGGGT 19685 0.0 42.44653 5 TTAGGGC 11940 0.0 42.323284 4 TTAGGGA 57430 0.0 42.23402 4 GTTTAGA 1960 0.0 42.091835 2 >>END_MODULE