##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527548_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3390487 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73611755479375 33.0 31.0 34.0 30.0 34.0 2 32.33131877514941 34.0 31.0 34.0 30.0 34.0 3 32.107496061775194 33.0 31.0 34.0 30.0 34.0 4 36.25373817979541 37.0 37.0 37.0 35.0 37.0 5 35.47861767350826 37.0 35.0 37.0 33.0 37.0 6 36.11391814804186 37.0 35.0 37.0 35.0 37.0 7 36.49182167635505 37.0 37.0 37.0 35.0 37.0 8 36.611553443502366 37.0 37.0 37.0 35.0 37.0 9 38.591313283312985 39.0 39.0 39.0 39.0 39.0 10 37.42874430723374 39.0 37.0 39.0 34.0 39.0 11 37.46129213885793 39.0 37.0 39.0 35.0 39.0 12 37.29983303283569 39.0 37.0 39.0 35.0 39.0 13 37.25236993977561 39.0 37.0 39.0 34.0 39.0 14 38.06793861766761 40.0 38.0 40.0 34.0 40.0 15 38.235784121868036 40.0 38.0 40.0 35.0 40.0 16 38.26890060336465 40.0 38.0 40.0 35.0 40.0 17 38.25667581087909 40.0 38.0 40.0 35.0 40.0 18 38.15614069601211 40.0 38.0 40.0 34.0 40.0 19 38.00957060150946 40.0 38.0 40.0 34.0 40.0 20 38.008636222465974 40.0 38.0 40.0 34.0 40.0 21 37.99938946823863 40.0 38.0 40.0 34.0 40.0 22 37.97247150630573 40.0 38.0 40.0 34.0 40.0 23 37.836859129676654 40.0 37.0 40.0 34.0 40.0 24 37.73099852617043 40.0 37.0 40.0 34.0 40.0 25 37.58785655276071 39.0 37.0 40.0 34.0 40.0 26 37.330867512543186 39.0 35.0 40.0 34.0 40.0 27 37.20407333813697 39.0 35.0 40.0 33.0 40.0 28 37.028895848885426 39.0 35.0 40.0 33.0 40.0 29 36.92592067157314 39.0 35.0 40.0 33.0 40.0 30 36.645976816899754 39.0 35.0 40.0 32.0 40.0 31 36.57854845041435 39.0 35.0 40.0 32.0 40.0 32 36.3280546422977 39.0 35.0 40.0 31.0 40.0 33 36.08481613408339 38.0 35.0 40.0 30.0 40.0 34 35.589706139560484 38.0 35.0 40.0 28.0 40.0 35 35.376649726130786 38.0 35.0 40.0 27.0 40.0 36 35.143958375301246 38.0 35.0 40.0 26.0 40.0 37 34.6751906142097 38.0 34.0 40.0 23.0 40.0 38 34.61859255027375 38.0 34.0 40.0 23.0 40.0 39 34.298927263251564 38.0 34.0 40.0 21.0 40.0 40 33.83151889389342 38.0 33.0 40.0 17.0 40.0 41 33.6082256029886 38.0 33.0 40.0 15.0 40.0 42 33.394412661071996 37.0 33.0 40.0 15.0 40.0 43 33.22025301969894 37.0 33.0 40.0 13.0 40.0 44 33.05218984765315 37.0 33.0 40.0 12.0 40.0 45 32.91107236217098 36.0 33.0 40.0 11.0 40.0 46 32.75211732119899 36.0 33.0 40.0 10.0 40.0 47 32.60392327119968 35.0 32.0 40.0 10.0 40.0 48 32.38640260234002 35.0 32.0 39.0 10.0 40.0 49 32.18598419637061 35.0 31.0 39.0 10.0 40.0 50 32.393628407954374 35.0 32.0 39.0 10.0 40.0 51 32.445169381271775 35.0 33.0 39.0 10.0 40.0 52 32.06751773417801 35.0 32.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 34.0 12 48.0 13 61.0 14 116.0 15 253.0 16 458.0 17 962.0 18 1710.0 19 3003.0 20 4993.0 21 8007.0 22 12782.0 23 19862.0 24 28860.0 25 39554.0 26 56288.0 27 75866.0 28 91814.0 29 90270.0 30 74598.0 31 71198.0 32 85101.0 33 114489.0 34 210530.0 35 222606.0 36 356492.0 37 578761.0 38 1009329.0 39 232436.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.4819033371902 0.29600467425476046 0.13933101645869753 0.08276097209633897 8 98.83813151326049 0.7582686499019167 0.2762140070143316 0.1273858298232673 9 96.73197390227422 1.6735353947677722 0.7764961198789436 0.817994583079068 10 58.85856515597907 27.80924982163329 5.667474908471851 7.664710113915789 11 34.937576814186286 30.123460140091968 17.558215088274927 17.38074795744682 12 30.1212775627808 24.80180575828782 23.00530867689509 22.071608002036285 13 22.97584388319436 25.927160316497304 24.730724524235015 26.366271276073324 14 23.884887333294596 28.40668611913274 25.407824893591986 22.30060165398068 15 26.46714174099473 25.858173176891697 23.542547132609563 24.13213794950401 16 27.198629577402894 26.96096460478981 23.12776896062424 22.712636857183057 17 29.999731601979303 26.951290478329515 19.46245480369044 23.58652311600074 18 28.71165705693607 26.522030610941734 20.112302450945837 24.65400988117636 19 27.54713408427757 27.562176171151815 21.332009236431226 23.55868050813939 20 26.83228102629504 30.29558880479412 20.055850383735436 22.816279785175404 21 28.24594224959423 27.092922049251335 22.871434103714307 21.789701597440132 22 28.040367062312875 27.42664991784366 20.368224387823933 24.16475863201953 23 27.65172082948556 29.56351108262618 19.491241228767432 23.293526859120828 24 27.106400938862173 29.463938366376276 19.4162962429881 24.013364451773448 25 26.31409588062128 26.960079776150152 19.861453531601803 26.864370811626763 26 27.74896349698436 27.044521922661847 19.472305895878677 25.734208684475124 27 26.464251300771835 25.813666296316722 19.630837693818027 28.091244709093417 28 28.550293807349796 29.68676771213103 17.76381976984427 23.999118710674896 29 29.855622510866432 28.05243022610026 18.740464128014647 23.351483135018654 30 27.818894453805605 28.793385728952803 19.244993418349633 24.14272639889196 31 30.879310258378812 27.813791941983556 18.50530616988061 22.801591629757024 32 31.171598652346994 26.862955085803307 20.12424763758127 21.841198624268433 33 32.06217867816629 27.232105594270084 19.024110695602136 21.681605031961485 34 27.781407213771946 29.860607045536526 20.900950217476133 21.457035523215396 35 27.99712843612142 31.975141034311587 20.29360383921248 19.73412669035451 36 30.04332415962663 30.5209546593159 17.351401140898048 22.084320040159422 37 29.330801150395207 30.095175117910788 19.01602926069323 21.557994471000775 38 31.879609035516136 28.593207996373383 18.524978859969085 21.0022041081414 39 31.069961335937872 26.077699162391717 18.384792509158714 24.467546992511696 40 29.831289723275745 26.189747962460853 19.930971568391207 24.047990745872198 41 29.56062064240329 25.43566750145333 19.52232820830754 25.48138364783584 42 30.041996916667134 23.52290393680908 20.577073441072034 25.858025705451755 43 28.16043830871494 23.825839768741186 22.344076234476052 25.66964568806782 44 28.263107925203666 22.94859116109279 22.00716298278094 26.78113793092261 45 28.42983913520388 24.520489239451443 21.557021159497147 25.492650465847532 46 28.192144668302817 24.320075552568113 22.61229728944544 24.875482489683634 47 29.102131935618686 24.85607524818706 21.320860395571493 24.72093242062276 48 29.4048023189589 23.94732674096671 22.32413809579568 24.323732844278712 49 29.223146999236395 23.459933631953167 22.65013846093496 24.666780907875477 50 26.074897205032787 24.714561654417196 22.474499975962157 26.73604116458786 51 25.555532287839476 25.52235121385217 22.525554588470623 26.39656190983773 52 27.546632681381762 24.419235348786177 22.67597545721308 25.358156512618983 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 147.0 6 294.0 7 335.5 8 377.0 9 487.5 10 598.0 11 7195.0 12 13792.0 13 12648.5 14 10507.5 15 9510.0 16 8582.5 17 7655.0 18 8264.0 19 8873.0 20 9625.0 21 10377.0 22 12080.5 23 13784.0 24 16614.0 25 19444.0 26 23664.5 27 27885.0 28 32717.0 29 37549.0 30 43350.0 31 49151.0 32 53258.0 33 57365.0 34 60908.5 35 64452.0 36 65854.0 37 67256.0 38 67592.5 39 69103.0 40 70277.0 41 72772.5 42 75268.0 43 77357.0 44 79446.0 45 83416.5 46 87387.0 47 93571.5 48 99756.0 49 102892.5 50 106029.0 51 114975.0 52 123921.0 53 149711.5 54 175502.0 55 194114.0 56 212726.0 57 239697.0 58 266668.0 59 292090.5 60 317513.0 61 300271.5 62 283030.0 63 288915.0 64 257690.5 65 220581.0 66 196342.0 67 172103.0 68 135827.0 69 99551.0 70 87385.0 71 75219.0 72 67859.5 73 60500.0 74 60147.5 75 59795.0 76 43656.5 77 27518.0 78 18406.5 79 9295.0 80 6538.5 81 3782.0 82 2537.5 83 1293.0 84 899.0 85 505.0 86 331.5 87 158.0 88 100.5 89 32.5 90 22.0 91 12.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3390487.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.064863233613746 #Duplication Level Percentage of deduplicated Percentage of total 1 76.5648214640976 13.065682067908796 2 8.50741082053196 2.9035560424908717 3 3.1163029499418395 1.5953785090579364 4 1.5215979558706314 1.0386344405391426 5 0.9281105857564335 0.7919040105801338 6 0.6305462765996106 0.6456111583582042 7 0.45328027593923587 0.5414616140778431 8 0.3686670733667957 0.503300254859281 9 0.3193540362491586 0.49047596565249757 >10 5.504445778361607 24.29993630021033 >50 1.3672897328520306 15.88463196176392 >100 0.646811245146733 20.77578390664866 >500 0.04652509854462417 5.394404781191938 >1k 0.020988766260732712 6.337527207082775 >5k 0.002448689397085483 2.825785573415695 >10k+ 0.0013992510840488473 2.9059262061619737 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGACATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 15169 0.44739885450084305 No Hit GGACATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 14028 0.41374587190571743 No Hit GGACATGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTGGACATGGGAAG 12031 0.3548457787922502 No Hit GGACATGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 11468 0.3382404946546027 No Hit GGACATGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 11386 0.33582196303952794 No Hit GGACATGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 11334 0.33428826006411466 No Hit GGACATGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 11105 0.3275340681146986 No Hit GGACATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 10838 0.3196590932217112 No Hit GGACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 9632 0.2840889819073189 No Hit GGACATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 9523 0.2808741045165488 No Hit GGACATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 9246 0.2727041867436743 No Hit GGACATGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 8140 0.24008350422815364 No Hit GGACATGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 6403 0.1888519259917528 No Hit GGACATGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 6377 0.18808507450404618 No Hit GGACATGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 6291 0.18554856573701656 No Hit GGACATGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 6183 0.18236318263423512 No Hit GGACATGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 5922 0.1746651734691801 No Hit GGACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 5497 0.16213010107397552 No Hit GGACATGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 5453 0.16083235240247198 No Hit GGACATGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 5407 0.159475615154991 No Hit GGACATGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 5395 0.1591216836991264 No Hit GGACATGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 5205 0.15351776898127023 No Hit GGACATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 4706 0.13880011927490063 No Hit GGACATGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4615 0.1361161390679274 No Hit GGACATGGGGCTCTCAGCTCCTGAAGGCAAATCCCAATTCCAGAGCAAGGAA 4576 0.13496586183636747 No Hit GGACATGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 4532 0.13366811316486393 No Hit GGACATGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 3971 0.11712181760319387 No Hit GGACATGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 3941 0.11623698896353239 No Hit GGACATGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 3822 0.11272716869287508 No Hit GGACATGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 3759 0.11086902854958594 No Hit GGACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 3744 0.11042661422975521 No Hit GGACATGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 3713 0.10951229130210499 No Hit GGACATGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 3474 0.1024631564728017 Illumina Single End Adapter 2 (97% over 34bp) GGACATGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTT 3434 0.10128338495325304 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002624991630995783 0.0 0.0 0.0 0.0 8 0.006252789053607933 0.0 0.0 0.0 0.0 9 0.011178335147723616 0.0 0.0 0.0 0.0 10 0.06273435055200034 0.0 0.0 0.0 0.0 11 0.14390263109694862 0.0 0.0 0.0 0.0 12 0.21085466483133544 0.0 0.0 0.0 0.0 13 0.26241068023561215 0.0 0.0 0.0 0.0 14 0.3201310018295307 0.0 0.0 0.0 0.0 15 0.375580263248318 0.0 0.0 0.0 0.0 16 0.4317078932908458 0.0 0.0 0.0 0.0 17 0.4828214943752918 0.0 0.0 0.0 0.0 18 0.532253921044381 0.0 0.0 0.0 0.0 19 0.5896498054704236 0.0 0.0 0.0 0.0 20 0.6537703875578936 0.0 0.0 0.0 0.0 21 0.7124345263674511 0.0 0.0 0.0 0.0 22 0.7769680284867632 0.0 0.0 0.0 0.0 23 0.8533582343775393 0.0 0.0 0.0 0.0 24 0.927093954349331 0.0 0.0 0.0 0.0 25 0.9927482394122142 0.0 0.0 0.0 0.0 26 1.0539193927008126 0.0 0.0 0.0 0.0 27 1.1194851948997298 0.0 0.0 0.0 0.0 28 1.2296758548255753 0.0 0.0 0.0 0.0 29 1.2781054757030479 0.0 0.0 0.0 0.0 30 1.3388637089598043 0.0 0.0 0.0 0.0 31 1.3699801827879003 0.0 0.0 0.0 0.0 32 1.3989730678808088 0.0 0.0 0.0 0.0 33 1.4240137183832293 0.0 0.0 0.0 0.0 34 1.456427940882829 0.0 0.0 0.0 0.0 35 1.5211089144420846 0.0 0.0 0.0 0.0 36 1.5489220280154443 0.0 0.0 0.0 0.0 37 1.5734612756220567 0.0 0.0 0.0 0.0 38 1.5969682231490638 0.0 0.0 0.0 0.0 39 1.622451287971315 0.0 0.0 0.0 0.0 40 1.6486717099932842 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGAT 35 1.0203621E-7 46.000004 41 ATCGTTA 25 3.418576E-5 46.0 15 ATGGGAT 18755 0.0 44.45481 5 ATGGGGC 40800 0.0 43.50833 5 ATGGGAG 33500 0.0 43.466568 5 TGGGATT 6410 0.0 43.27301 6 ATGGGAC 13005 0.0 43.188004 5 ATGGGCT 8675 0.0 42.95101 5 CATGGGG 209015 0.0 42.897976 4 ACATGGG 350580 0.0 42.709877 3 ATGGGGT 32095 0.0 42.653374 5 GGACATG 364045 0.0 42.63319 1 GACATGG 360925 0.0 42.60345 2 ATGGGGG 78085 0.0 42.580265 5 TGGGGCT 19380 0.0 42.47523 6 TATAGTC 65 0.0 42.461536 19 TGGGATC 6090 0.0 42.147785 6 CATGGGA 97750 0.0 42.143528 4 TGGGGAC 10920 0.0 41.99817 6 ATGGGGA 59465 0.0 41.996803 5 >>END_MODULE