##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527523_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1125816 Sequences flagged as poor quality 0 Sequence length 52 %GC 59 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.499333816538403 31.0 31.0 34.0 30.0 34.0 2 31.696930048960045 31.0 31.0 34.0 30.0 34.0 3 32.218115571283406 34.0 31.0 34.0 30.0 34.0 4 35.8536688055597 37.0 35.0 37.0 35.0 37.0 5 35.79561491398239 37.0 35.0 37.0 35.0 37.0 6 35.997784717929036 37.0 35.0 37.0 35.0 37.0 7 36.38455928855159 37.0 35.0 37.0 35.0 37.0 8 36.547954550299515 37.0 37.0 37.0 35.0 37.0 9 38.63756954955339 39.0 39.0 39.0 38.0 39.0 10 37.22313326511615 39.0 37.0 39.0 34.0 39.0 11 36.85104670745486 39.0 37.0 39.0 32.0 39.0 12 36.551778443369074 39.0 35.0 39.0 32.0 39.0 13 36.522553419031176 39.0 35.0 39.0 32.0 39.0 14 37.313906535348586 39.0 37.0 40.0 33.0 40.0 15 37.44674085285695 39.0 37.0 40.0 33.0 40.0 16 37.52264579647118 40.0 37.0 40.0 33.0 40.0 17 37.467343686712574 39.0 37.0 40.0 33.0 40.0 18 37.3194971469583 39.0 36.0 40.0 33.0 40.0 19 37.1722013188656 39.0 36.0 40.0 32.0 40.0 20 36.93810178572698 39.0 35.0 40.0 31.0 40.0 21 36.97598719506562 39.0 35.0 40.0 32.0 40.0 22 36.87765673964484 39.0 35.0 40.0 31.0 40.0 23 36.73054566643217 38.0 35.0 40.0 31.0 40.0 24 36.63377585680075 38.0 35.0 40.0 31.0 40.0 25 36.54588049912241 38.0 35.0 40.0 31.0 40.0 26 36.3818652426329 38.0 35.0 40.0 31.0 40.0 27 36.216319540670945 38.0 35.0 40.0 31.0 40.0 28 35.944030818535175 38.0 34.0 40.0 30.0 40.0 29 35.85438739545361 38.0 34.0 40.0 30.0 40.0 30 35.678201411243045 37.0 34.0 40.0 30.0 40.0 31 35.52477136583598 37.0 34.0 40.0 30.0 40.0 32 35.32285115862628 37.0 34.0 40.0 29.0 40.0 33 35.08610376828896 36.0 33.0 39.0 29.0 40.0 34 34.78908720430337 36.0 33.0 39.0 28.0 40.0 35 34.563386024003925 35.0 33.0 39.0 28.0 40.0 36 34.41444339039417 35.0 33.0 39.0 28.0 40.0 37 34.28846099184947 35.0 33.0 39.0 27.0 40.0 38 34.0801543058546 35.0 33.0 38.0 27.0 40.0 39 33.89318059078926 35.0 33.0 38.0 26.0 40.0 40 34.168964555486866 35.0 33.0 38.0 27.0 40.0 41 34.247695893467494 35.0 33.0 38.0 28.0 40.0 42 34.34473572946201 35.0 33.0 38.0 29.0 40.0 43 34.28407839291678 35.0 33.0 38.0 29.0 40.0 44 34.227425263098056 35.0 33.0 37.0 29.0 40.0 45 34.12949096477577 35.0 33.0 37.0 29.0 40.0 46 33.87357703212603 35.0 33.0 37.0 28.0 40.0 47 33.81846855969359 35.0 33.0 37.0 28.0 40.0 48 33.68688666709303 35.0 33.0 36.0 28.0 40.0 49 33.56627903671648 35.0 33.0 36.0 27.0 39.0 50 33.41483332978036 35.0 33.0 36.0 27.0 39.0 51 33.283588970133664 35.0 33.0 35.0 27.0 39.0 52 32.79126695658971 35.0 32.0 35.0 25.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 10.0 15 24.0 16 64.0 17 120.0 18 272.0 19 504.0 20 942.0 21 1495.0 22 2440.0 23 3350.0 24 4594.0 25 6412.0 26 8887.0 27 11929.0 28 15669.0 29 20184.0 30 26219.0 31 35263.0 32 48852.0 33 71813.0 34 117047.0 35 157974.0 36 213949.0 37 194042.0 38 168247.0 39 15512.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 100.0 0.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.3851570771778 0.5428062845083033 0.026292040617649774 0.045744597696248765 8 99.73734606720814 0.17605008278439815 0.06439773462093273 0.022206115386528526 9 98.725813099121 0.768331592373887 0.2507514549446801 0.2551038535604397 10 63.61208225855734 27.71065609300277 2.94435325133059 5.732908397109297 11 36.371751689441254 25.845253576072825 18.527805609442396 19.255189125043522 12 29.457211480384004 16.586191704505886 26.376246207195493 27.580350607914617 13 24.972197943536067 16.629893339586577 30.188503272293165 28.209405444584196 14 25.535966800969252 17.477012229351864 29.497804259310577 27.489216710368304 15 25.981243826699924 17.06548849900872 28.00519800748968 28.94806966680168 16 30.620101330945733 17.728385455527366 23.46138267709821 28.190130536428686 17 31.617244736262407 18.60010872114093 22.431374221009474 27.35127232158719 18 29.96981744796663 18.530825641134964 22.688698686108566 28.810658224789844 19 30.92672337220292 17.75370042706801 23.093116459528023 28.226459741201047 20 29.562201993931513 19.98310558741393 22.616484398871574 27.838208019782982 21 33.13072473654665 18.09913875802085 23.334541346010358 25.435595159422142 22 32.05275107122301 18.04699879909328 22.65663305549042 27.243617074193295 23 30.43703411569919 20.457872334377907 21.920900040503955 27.184193509418947 24 29.381799512531355 19.929455612640076 21.94230673573657 28.746438139092 25 29.329748378065336 20.146364947735687 22.714724253341576 27.809162420857405 26 29.119856175431863 20.898885785954366 21.49827325246754 28.482984786146226 27 30.260539910607058 18.74302727976863 21.14111009259062 29.85532271703369 28 31.33949064500771 19.610842269074162 21.02110824504182 28.028558840876304 29 31.268964022540096 19.967650131104904 19.75935676877927 29.004029077575733 30 30.636445031870217 19.560034677069787 21.411402929075443 28.392117361984553 31 32.74993426989845 19.662982228001734 19.829883391246884 27.757200110852924 32 33.5865718732013 18.417929750509852 21.21492322013544 26.780575156153404 33 33.481670184115345 19.019004881792405 21.491167295543853 26.008157638548397 34 31.817899194895084 21.571642257704635 22.72120843903444 23.889250108365843 35 30.601092896174865 23.537682889566327 23.101377134451813 22.759847079807003 36 32.78004576236258 21.980145956355212 20.52280301576812 24.717005265514082 37 31.011461908517912 22.84627328089137 19.765485656625952 26.37677915396477 38 33.77923213029483 21.214745571212347 20.076193623114257 24.92982867537857 39 31.78858712258486 20.182338854661865 20.70400491732219 27.325069105431083 40 31.1487845260682 21.30703418675876 20.621398168084305 26.922783119088734 41 29.072157439581602 20.420121938220813 21.66366439986641 28.844056222331183 42 27.61454802560987 18.648962174991297 24.478511586262762 29.25797821313607 43 28.74208574047624 17.324234155492547 26.167242249177487 27.766437854853727 44 28.436174294911424 18.10731060848309 24.23655375301115 29.219961343594335 45 28.87985248033426 18.432941084511146 25.093620982469606 27.593585452684987 46 29.254602883597318 20.254020195129577 23.21231888692291 27.279058034350196 47 29.067805040965844 20.283421091901342 24.11539718746225 26.533376679670567 48 29.074111577735618 20.571656469618482 23.656974141422754 26.697257811223146 49 29.282049642215068 20.60167913762107 23.149786465994442 26.966484754169418 50 27.018447064173895 21.11659454120389 23.57934156203145 28.285616832590758 51 27.863434166862078 22.557682605328047 22.355251657464454 27.223631570345418 52 28.760383579554738 22.400729781776064 21.736322809411128 27.10256382925807 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 10.0 8 18.0 9 13.0 10 8.0 11 33.5 12 59.0 13 156.5 14 330.5 15 407.0 16 402.5 17 398.0 18 559.0 19 720.0 20 756.5 21 793.0 22 825.0 23 857.0 24 990.0 25 1123.0 26 1419.0 27 1715.0 28 2031.5 29 2348.0 30 2587.5 31 2827.0 32 4030.0 33 5233.0 34 5407.0 35 5581.0 36 7073.5 37 8566.0 38 8808.5 39 12175.5 40 15300.0 41 17031.5 42 18763.0 43 20146.0 44 21529.0 45 22719.5 46 23910.0 47 29894.5 48 35879.0 49 36022.5 50 36166.0 51 40780.5 52 45395.0 53 54396.0 54 63397.0 55 67910.5 56 72424.0 57 82374.0 58 92324.0 59 102242.5 60 112161.0 61 111233.0 62 110305.0 63 111937.0 64 104127.5 65 94686.0 66 84201.0 67 73716.0 68 60927.0 69 48138.0 70 41220.0 71 34302.0 72 28388.0 73 22474.0 74 26510.5 75 30547.0 76 21779.0 77 13011.0 78 8652.0 79 4293.0 80 3275.5 81 2258.0 82 1584.0 83 910.0 84 574.0 85 238.0 86 187.0 87 136.0 88 76.0 89 12.0 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1125816.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.88448218572683 #Duplication Level Percentage of deduplicated Percentage of total 1 68.1089999999755 6.05113197187451 2 10.413999999996253 1.8504599496425185 3 3.9959999999985625 1.0650717244245493 4 1.8970000000352396 0.6741545082654753 5 1.0259999999996714 0.4557739361276404 6 0.5989999999997846 0.3193082897549075 7 0.4349999999998435 0.2705324825552846 8 0.3259999999998827 0.23170729540367235 9 0.26199999999990575 0.20949608993936328 >10 6.930999999997507 17.84776972843464 >50 4.024999999998552 24.979965492667997 >100 1.8339999999993404 29.964515378146384 >500 0.10199999999996331 6.166186016179631 >1k 0.03999999999998561 7.718305054025549 >5k 0.003999999999998561 2.1956220825578816 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TGAAGCGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 7469 0.6634299032879263 No Hit TGAAGCGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 6198 0.5505340126628152 No Hit TGAAGCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5766 0.512161845274894 No Hit TGAAGCGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 5280 0.4689931569634825 No Hit TGAAGCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4901 0.4353286860375052 No Hit TGAAGCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4771 0.42378150603651044 No Hit TGAAGCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 4507 0.4003318481883363 No Hit TGAAGCGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4345 0.3859422854178658 No Hit TGAAGCGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 4256 0.37803690834026166 No Hit TGAAGCGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 4236 0.37626041910933933 No Hit TGAAGCGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 3562 0.3163927320272584 No Hit TGAAGCGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 3376 0.29987138217968123 No Hit TGAAGCGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 3228 0.28672536187085634 No Hit TGAAGCGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 2987 0.26531866663824283 No Hit TGAAGCGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 2818 0.25030733263694954 No Hit TGAAGCGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2652 0.2355624720202946 No Hit TGAAGCGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 2310 0.2051845061715236 No Hit TGAAGCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 2308 0.20500685724843137 No Hit TGAAGCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 2204 0.19576911324763552 No Hit TGAAGCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 2114 0.18777491170848523 No Hit TGAAGCGGGAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTCGAAG 2050 0.18209014616953392 No Hit TGAAGCGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1858 0.16503584955268003 No Hit TGAAGCGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1794 0.1593510840137287 No Hit TGAAGCGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCG 1637 0.14540564355098878 No Hit TGAAGCGGGGGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCTTCA 1547 0.13741144201183852 No Hit TGAAGCGGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGT 1494 0.13270374554989448 No Hit TGAAGCGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAAGA 1472 0.13074960739587996 No Hit TGAAGCGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1457 0.12941724047268827 No Hit TGAAGCGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTACTC 1385 0.12302187924136804 No Hit TGAAGCGGGGGCAGCGTGTCTCAGTCGGTTGTCGAGTCCCTTCTGTCCCAGT 1330 0.11813653385633176 No Hit TGAAGCGGGGAGTCCGGAGTAGGCGAGCGAGCGAGGCAGAGGTTTTTGGTCG 1330 0.11813653385633176 No Hit TGAAGCGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 1295 0.11502767770221776 No Hit TGAAGCGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATCCGC 1291 0.11467237985603332 No Hit TGAAGCGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTGC 1283 0.1139617841636644 No Hit TGAAGCGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 1281 0.11378413524057217 No Hit TGAAGCGGGGACAGGAGCCACTGCCAGGATCAAGAGTCACCGCTTCGCAAGC 1245 0.11058645462491207 No Hit TGAAGCGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCTTG 1199 0.10650052939379083 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.882446154611411E-4 0.0 0.0 0.0 0.0 8 0.001598840307830054 0.0 0.0 0.0 0.0 9 0.001687664769376168 0.0 0.0 0.0 0.0 10 0.007550079231419699 0.0 0.0 0.0 0.0 11 0.013590142616555459 0.0 0.0 0.0 0.0 12 0.02007432830942179 0.0 0.0 0.0 0.0 13 0.027357934156203145 0.0 0.0 0.0 0.0 14 0.03366447092597725 0.0 0.0 0.0 0.0 15 0.04077042784966638 0.0 0.0 0.0 0.0 16 0.04796520923490162 0.0 0.0 0.0 0.0 17 0.05524881508168297 0.0 0.0 0.0 0.0 18 0.061111229543726504 0.0 0.0 0.0 0.0 19 0.06812836200586952 0.0 0.0 0.0 0.0 20 0.07336900523709025 0.0 0.0 0.0 0.0 21 0.07798787723748819 0.0 0.0 0.0 0.0 22 0.08296204708407058 0.0 0.0 0.0 0.0 23 0.08846916369992965 0.0 0.0 0.0 0.0 24 0.09459805154661152 0.0 0.0 0.0 0.0 25 0.1001051681624706 0.0 0.0 0.0 0.0 26 0.1057899337014219 0.0 0.0 0.0 0.0 27 0.11031998124027372 0.0 0.0 0.0 0.0 28 0.11840300724097011 0.0 0.0 0.0 0.0 29 0.12293305477982193 0.0 0.0 0.0 0.0 30 0.13083843185742608 0.0 0.0 0.0 0.0 31 0.13812203770420745 0.0 0.0 0.0 0.0 32 0.14620506370490383 0.0 0.0 0.0 0.0 33 0.15224512709003957 0.0 0.0 0.0 0.0 34 0.1606834509369204 0.0 0.0 0.0 0.0 35 0.17152003524554635 0.0 0.0 0.0 0.0 36 0.18235661955417226 0.0 0.0 0.0 0.0 37 0.19097259232414532 0.0 0.0 0.0 0.0 38 0.19745677801701167 0.0 0.0 0.0 0.0 39 0.2083821867871837 0.0 0.0 0.0 0.0 40 0.2160210904801495 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGCG 20 6.3113973E-4 46.000004 13 TAGACGT 20 6.3113973E-4 46.000004 26 TTTAACG 20 6.3113973E-4 46.000004 42 TAAACGT 40 5.6115823E-9 46.000004 36 GCCGATA 20 6.3113973E-4 46.000004 30 TAATTCG 20 6.3113973E-4 46.000004 16 CTCATAA 40 5.6115823E-9 46.000004 45 CGAATAG 20 6.3113973E-4 46.000004 40 TATACAA 20 6.3113973E-4 46.000004 22 CGATCTA 20 6.3113973E-4 46.000004 42 TATAACG 35 1.01954356E-7 46.000004 22 AATAACC 20 6.3113973E-4 46.000004 41 ACGAAAT 20 6.3113973E-4 46.000004 41 TCAAACG 20 6.3113973E-4 46.000004 32 AACGTAA 75 0.0 46.0 38 GATACTA 25 3.4171113E-5 46.0 9 CTATATG 25 3.4171113E-5 46.0 36 CACGATT 25 3.4171113E-5 46.0 29 GATCACG 30 1.8613682E-6 46.0 40 TATGCGT 25 3.4171113E-5 46.0 25 >>END_MODULE