##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527522_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1587064 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.136682578648372 31.0 30.0 33.0 26.0 33.0 2 30.871136261675648 31.0 31.0 33.0 28.0 34.0 3 31.928947414849056 31.0 31.0 33.0 30.0 34.0 4 35.942311715217535 37.0 35.0 37.0 35.0 37.0 5 35.212844598579515 35.0 35.0 37.0 33.0 37.0 6 35.608577221838566 35.0 35.0 37.0 35.0 37.0 7 36.34816743370148 37.0 36.0 37.0 35.0 37.0 8 36.648828906710754 37.0 37.0 37.0 35.0 37.0 9 38.598579515381864 39.0 39.0 39.0 38.0 39.0 10 37.23368307768307 39.0 37.0 39.0 34.0 39.0 11 37.2756687821033 39.0 37.0 39.0 34.0 39.0 12 37.04570830161859 39.0 37.0 39.0 34.0 39.0 13 37.00736769279626 39.0 37.0 39.0 34.0 39.0 14 37.688267769919804 40.0 37.0 40.0 33.0 40.0 15 37.7515809066301 40.0 37.0 40.0 33.0 40.0 16 37.86918674987272 40.0 37.0 40.0 34.0 40.0 17 37.82186477671978 40.0 37.0 40.0 34.0 40.0 18 37.678086706018156 39.0 37.0 40.0 34.0 40.0 19 37.58187256468548 39.0 36.0 40.0 34.0 40.0 20 37.41495112988512 39.0 36.0 40.0 33.0 40.0 21 37.33146615385391 39.0 36.0 40.0 33.0 40.0 22 37.169656044116685 38.0 36.0 40.0 33.0 40.0 23 36.97989495067622 38.0 35.0 40.0 33.0 40.0 24 36.74271863012456 38.0 35.0 40.0 32.0 40.0 25 36.50333067853596 38.0 35.0 40.0 32.0 40.0 26 35.82998480212518 38.0 34.0 39.0 31.0 40.0 27 35.762329685507325 37.0 34.0 39.0 31.0 40.0 28 35.60822373892924 37.0 34.0 39.0 31.0 40.0 29 35.27138666115544 36.0 34.0 38.0 30.0 40.0 30 35.011991324861505 36.0 34.0 38.0 30.0 40.0 31 34.82532210421256 36.0 33.0 38.0 30.0 39.0 32 34.727082839759454 36.0 33.0 38.0 30.0 39.0 33 34.182813673550655 35.0 33.0 38.0 28.0 39.0 34 33.69312390678637 35.0 32.0 38.0 27.0 39.0 35 33.49936423483867 35.0 32.0 38.0 26.0 39.0 36 33.18806739992842 35.0 31.0 38.0 26.0 39.0 37 32.89690963943483 34.0 31.0 37.0 25.0 38.0 38 32.39067800668404 34.0 31.0 37.0 24.0 38.0 39 31.611566389257145 34.0 30.0 36.0 23.0 38.0 40 31.374866420005745 33.0 29.0 36.0 22.0 38.0 41 30.979786574454465 33.0 29.0 36.0 21.0 38.0 42 30.583926672144287 33.0 29.0 35.0 21.0 38.0 43 30.10612048411406 32.0 27.0 35.0 20.0 38.0 44 29.60712674473115 31.0 27.0 35.0 19.0 37.0 45 29.040257355721003 31.0 26.0 34.0 18.0 37.0 46 28.94564302384781 31.0 26.0 34.0 18.0 37.0 47 28.45496967986168 31.0 25.0 34.0 18.0 36.0 48 27.96898990840949 30.0 24.0 33.0 17.0 36.0 49 27.457696097951942 29.0 24.0 33.0 15.0 35.0 50 30.87140468185278 33.0 29.0 36.0 22.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 6.0 14 17.0 15 44.0 16 88.0 17 238.0 18 473.0 19 893.0 20 1470.0 21 2253.0 22 3477.0 23 5117.0 24 7480.0 25 10693.0 26 15315.0 27 21230.0 28 30311.0 29 40555.0 30 53174.0 31 66931.0 32 101530.0 33 157373.0 34 214458.0 35 387050.0 36 400132.0 37 65496.0 38 1251.0 39 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.57714370687005 0.24151514998765017 0.15815367244169107 0.023187470700614467 8 99.34129940569505 0.5087381479259815 0.08575583593352254 0.06420661044545148 9 96.85047357888529 1.5885937807170978 0.6111914831411965 0.9497411572564181 10 52.53108885337957 34.30649299587162 4.401145763497881 8.761272387250923 11 34.239072904432334 25.08764611887107 22.99321262406557 17.68006835263102 12 33.855660515265924 18.391948906912386 24.93774668192335 22.81464389589834 13 26.062906095784417 18.44443576314503 28.735703160049 26.756954981021558 14 26.126104555329842 20.17171330204705 29.327361719502175 24.374820423120934 15 26.694071568632395 19.883571172933166 27.957410665228373 25.464946593206072 16 30.70512594325119 22.868138903031003 25.323301391752317 21.10343376196549 17 32.75620894935554 21.879520926692308 22.70078585362657 22.663484270325583 18 30.27281823543348 22.35127253847356 23.92751647066533 23.448392755427633 19 28.685106586753907 23.654874661639354 24.5133151530121 23.146703598594637 20 27.2791771472354 26.313431594441056 22.978972492602693 23.428418765720853 21 28.0526809252809 25.145740814485112 26.61354551549276 20.188032744741232 22 27.067024392211025 24.828236290407947 25.225447745018474 22.87929157236255 23 29.82047352847774 24.646454081246883 25.012664895681585 20.52040749459379 24 30.51760987584622 24.84795824238972 22.822835121961056 21.811596759803006 25 29.332276455139805 22.025387760039923 23.377192098113245 25.265143686707027 26 26.64177374069351 22.45549013776382 24.77883689630664 26.123899225236038 27 25.863985321322897 22.271628617371448 24.489560597430224 27.374825463875435 28 29.17847043345448 24.773355075787745 21.582179420615677 24.4659950701421 29 30.077552007984554 25.020415055725543 21.77769768578961 23.124335250500295 30 30.423977861006236 23.614737653932043 22.941985956457962 23.019298528603763 31 31.411965743032415 23.461624735990483 22.889184053069066 22.237225467908036 32 32.85261337917059 22.247117948614548 23.17549890867665 21.724769763538205 33 32.84511525685165 22.631538488680984 23.412288351320427 21.111057903146943 34 28.88339726690291 25.030811611882065 26.034551851721165 20.05123926949386 35 27.643938744751313 28.7414370182929 24.533037104993877 19.08158713196191 36 28.453609936335273 28.049656472580814 22.57394786851696 20.922785722566953 37 27.718919967940803 30.366639278567213 21.700700160800068 20.213740592691913 38 29.86949486599154 27.86144730143208 21.41967809741762 20.849379735158756 39 28.876340210602724 25.930208233568404 20.884791035522195 24.30866052030668 40 28.171075646602784 26.084014255253727 22.022111269614836 23.722798828528653 41 24.976434472711876 26.842143732073815 21.574618288865477 26.606803506348832 42 23.963494855910035 25.705012526274935 23.50264387573532 26.828848742079714 43 24.5735521692887 24.831827827989294 23.746175327523023 26.848444675198984 44 26.271215275502435 23.439571435052397 22.913316665238455 27.375896624206714 45 26.015144946895653 25.11593735350307 23.081614856111663 25.787302843489613 46 26.047720822852767 26.015964069501923 22.752327568390438 25.183987539254876 47 25.917165281299305 25.68686581007445 23.757391006285822 24.638577902340423 48 25.49808955404445 26.060007661946837 23.698666216359264 24.743236567649447 49 27.37583361477546 24.44261857114773 23.390676116401103 24.79087169767571 50 25.607095870109838 24.717087653680004 23.395716870901236 26.28009960530892 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 33.0 2 66.0 3 51.5 4 37.0 5 50.0 6 63.0 7 939.5 8 1816.0 9 2194.0 10 2572.0 11 3251.0 12 3930.0 13 3583.5 14 3237.0 15 3580.0 16 3923.0 17 4693.5 18 5464.0 19 6355.0 20 7246.0 21 8991.5 22 10737.0 23 13040.0 24 15343.0 25 17285.5 26 19228.0 27 20369.0 28 21510.0 29 24632.0 30 27754.0 31 28437.5 32 29121.0 33 31169.5 34 33218.0 35 36492.5 36 39767.0 37 42759.0 38 45751.0 39 45862.0 40 45973.0 41 52300.5 42 58628.0 43 59857.5 44 61087.0 45 64687.5 46 68288.0 47 76702.5 48 85117.0 49 90640.5 50 96164.0 51 100191.5 52 104219.0 53 113030.0 54 121841.0 55 134450.5 56 147060.0 57 140256.5 58 133453.0 59 130004.0 60 126555.0 61 110195.5 62 93836.0 63 72112.5 64 50389.0 65 41669.0 66 32949.0 67 32504.0 68 32059.0 69 26678.5 70 21298.0 71 22506.5 72 23715.0 73 16504.0 74 9293.0 75 5872.0 76 2451.0 77 1881.5 78 1312.0 79 822.5 80 333.0 81 243.5 82 154.0 83 114.0 84 74.0 85 52.0 86 30.0 87 15.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1587064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.336584256205983 #Duplication Level Percentage of deduplicated Percentage of total 1 74.52340155461765 9.938876238922303 2 8.950489512373663 2.387379150321187 3 3.2577632420995455 1.3034230189509406 4 1.5008061015273417 0.8006250810098968 5 0.8699642969514232 0.5801176073091827 6 0.6312687087840114 0.5051380993802596 7 0.47638172752283264 0.44473135330576524 8 0.3948301342298131 0.42125482816360166 9 0.3345902183017383 0.40160615739151373 >10 5.770497794462779 20.44369827516403 >50 2.0732006874346403 19.095286164388362 >100 1.1299254034331498 29.778414286170623 >500 0.06158021843805506 5.3017101945203535 >1k 0.022913569651369325 5.651163665601124 >5k 9.547320688070552E-4 0.7563958261815688 >10k+ 0.0014320981032105828 2.190180053219285 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAGTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 13298 0.8378994167847043 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 10697 0.6740118860991113 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 10407 0.6557391510361271 No Hit AAAGTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 6754 0.42556569867377747 No Hit AAAGTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5127 0.3230493540273108 No Hit AAAGTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 4656 0.2933719119077744 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4627 0.29154463840147593 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 4570 0.28795310082013076 No Hit AAAGTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 4446 0.2801399313449237 No Hit AAAGTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3933 0.2478160931128171 No Hit AAAGTTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 3757 0.23672643321252326 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 2679 0.16880226632322326 No Hit AAAGTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 2606 0.16420257784185138 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 2465 0.15531824803536592 No Hit AAAGTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 2369 0.14926934263520564 No Hit AAAGTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 2022 0.12740506999087622 No Hit AAAGTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAAAGTTGGGA 1967 0.12393955127203439 No Hit AAAGTTGGGGAGTGCAGTGCTAAAGTTGGGAAAAAAAAAAAAAAAAAAAA 1963 0.12368751354702773 No Hit AAAGTTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 1891 0.1191508344969075 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTG 1773 0.11171572160921046 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 1731 0.10906932549664035 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGC 1700 0.10711603312783859 No Hit AAAGTTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1698 0.10699001426533523 No Hit AAAGTTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTC 1622 0.10220129749020834 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 4.4106601876168827E-4 0.0 0.0 0.0 0.0 8 0.0017012546437950834 0.0 0.0 0.0 0.0 9 0.003780565875100185 0.0 0.0 0.0 0.0 10 0.03849876249477022 0.0 0.0 0.0 0.0 11 0.0860078736585292 0.0 0.0 0.0 0.0 12 0.11864675904689415 0.0 0.0 0.0 0.0 13 0.13509222060357995 0.0 0.0 0.0 0.0 14 0.15494019144785592 0.0 0.0 0.0 0.0 15 0.1776865961297087 0.0 0.0 0.0 0.0 16 0.20320541578663495 0.0 0.0 0.0 0.0 17 0.2218562074371292 0.0 0.0 0.0 0.0 18 0.23987690477510673 0.0 0.0 0.0 0.0 19 0.2643245641007546 0.0 0.0 0.0 0.0 20 0.286377865038839 0.0 0.0 0.0 0.0 21 0.30824213768316844 0.0 0.0 0.0 0.0 22 0.33300484416507464 0.0 0.0 0.0 0.0 23 0.3628713145783661 0.0 0.0 0.0 0.0 24 0.3928007944229092 0.0 0.0 0.0 0.0 25 0.4212180479174123 0.0 0.0 0.0 0.0 26 0.45228169752448544 0.0 0.0 0.0 0.0 27 0.48240020566278363 0.0 0.0 0.0 0.0 28 0.5239864302888856 0.0 0.0 0.0 0.0 29 0.5488121462020435 0.0 0.0 0.0 0.0 30 0.5774814374215532 0.0 0.0 0.0 0.0 31 0.6023071533347112 0.0 0.0 0.0 0.0 32 0.6262507372103456 0.0 0.0 0.0 0.0 33 0.6484300570109334 0.0 0.0 0.0 0.0 34 0.674452952117873 0.0 0.0 0.0 0.0 35 0.7132037523376499 0.0 0.0 0.0 0.0 36 0.7426291567321797 0.0 0.0 0.0 0.0 37 0.770605344207921 0.0 0.0 0.0 0.0 38 0.8001567674649541 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACG 20 7.8573875E-4 44.000004 27 CGACAAT 20 7.8573875E-4 44.000004 30 ACCGTAC 20 7.8573875E-4 44.000004 44 CGAACAA 35 1.4465513E-7 44.0 18 AATTTCG 75 0.0 44.0 42 TCCGATT 25 4.4436092E-5 44.0 19 ACCGATT 35 1.4465513E-7 44.0 35 CGCGATT 25 4.4436092E-5 44.0 15 TTATCGT 30 2.5283298E-6 44.0 39 AATTGCG 70 0.0 44.0 43 CTACGCG 25 4.4436092E-5 44.0 40 ATTATCG 30 2.5283298E-6 44.0 38 CCAACGG 25 4.4436092E-5 44.0 32 GGCGATA 25 4.4436092E-5 44.0 20 TATACGG 25 4.4436092E-5 44.0 34 TATCGTT 35 1.4465513E-7 44.0 40 CGTCAAA 25 4.4436092E-5 44.0 34 TCGGTTA 50 2.7284841E-11 44.0 19 TACGTCG 50 2.7284841E-11 44.0 44 GTACGGT 30 2.5283298E-6 44.0 12 >>END_MODULE