##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527520_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1738886 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.850422051819383 31.0 30.0 31.0 26.0 33.0 2 30.710246675170197 31.0 31.0 33.0 28.0 34.0 3 31.728911498511117 31.0 31.0 34.0 30.0 34.0 4 35.77603534676799 37.0 35.0 37.0 35.0 37.0 5 34.743911906818504 35.0 35.0 37.0 32.0 37.0 6 35.438951719664196 35.0 35.0 37.0 35.0 37.0 7 36.131014914146185 37.0 35.0 37.0 35.0 37.0 8 36.5095998242553 37.0 37.0 37.0 35.0 37.0 9 38.57945086681933 39.0 39.0 39.0 37.0 39.0 10 37.062710839008425 39.0 37.0 39.0 33.0 39.0 11 37.08401873383304 39.0 37.0 39.0 34.0 39.0 12 36.89657976428587 39.0 35.0 39.0 33.0 39.0 13 36.81250064696593 39.0 35.0 39.0 33.0 39.0 14 37.475565390715666 40.0 37.0 40.0 33.0 40.0 15 37.6040861793125 40.0 37.0 40.0 33.0 40.0 16 37.62850871189946 40.0 37.0 40.0 33.0 40.0 17 37.66310327416518 40.0 37.0 40.0 33.0 40.0 18 37.57293462596168 40.0 36.0 40.0 33.0 40.0 19 37.42341476094465 39.0 36.0 40.0 33.0 40.0 20 37.314400138939526 39.0 36.0 40.0 32.0 40.0 21 37.37707474785581 39.0 36.0 40.0 32.0 40.0 22 37.3965573361336 39.0 36.0 40.0 33.0 40.0 23 37.377518710254726 39.0 36.0 40.0 33.0 40.0 24 37.32095548529346 39.0 36.0 40.0 33.0 40.0 25 37.29033990727397 39.0 36.0 40.0 33.0 40.0 26 37.163332156334576 39.0 35.0 40.0 33.0 40.0 27 37.08288237411768 39.0 35.0 40.0 33.0 40.0 28 36.90847531120499 39.0 35.0 40.0 32.0 40.0 29 36.86659217453013 39.0 35.0 40.0 32.0 40.0 30 36.78111331047579 39.0 35.0 40.0 32.0 40.0 31 36.61226152835781 38.0 35.0 40.0 31.0 40.0 32 36.55385804474819 38.0 35.0 40.0 31.0 40.0 33 36.38238389405631 38.0 35.0 40.0 31.0 40.0 34 36.02187262419733 38.0 35.0 40.0 30.0 40.0 35 35.85792168089225 38.0 35.0 40.0 30.0 40.0 36 35.82434386152974 38.0 34.0 40.0 30.0 40.0 37 35.69559591600599 38.0 34.0 40.0 30.0 40.0 38 35.582552277722634 38.0 34.0 40.0 29.0 40.0 39 35.400306863129614 38.0 34.0 40.0 29.0 40.0 40 35.58075284981304 38.0 35.0 40.0 29.0 40.0 41 35.5981979267186 38.0 35.0 40.0 30.0 40.0 42 35.631642902409936 38.0 35.0 40.0 30.0 40.0 43 35.58452480496134 38.0 35.0 40.0 30.0 40.0 44 35.470447746430764 38.0 35.0 40.0 30.0 40.0 45 35.31366173515688 38.0 34.0 40.0 29.0 40.0 46 35.11747693638341 37.0 34.0 40.0 29.0 40.0 47 34.99753635373452 37.0 34.0 40.0 28.0 40.0 48 34.877838455194876 37.0 34.0 40.0 28.0 40.0 49 34.75330412689504 36.0 34.0 40.0 27.0 40.0 50 34.59032046954199 36.0 34.0 40.0 27.0 40.0 51 34.399692101724895 36.0 34.0 40.0 27.0 40.0 52 33.95845846133674 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 5.0 13 11.0 14 16.0 15 33.0 16 72.0 17 173.0 18 323.0 19 654.0 20 1088.0 21 1901.0 22 2997.0 23 4458.0 24 6695.0 25 9768.0 26 14000.0 27 19459.0 28 24884.0 29 29351.0 30 34638.0 31 43514.0 32 60009.0 33 86380.0 34 146713.0 35 133963.0 36 210147.0 37 335055.0 38 522002.0 39 50576.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.61205047369408 0.22175116712653964 0.1431376179922088 0.023060741187173855 8 99.35797976405584 0.5029656918279864 0.08810238278990111 0.050952161326274406 9 96.89157311060069 1.5416766826577475 0.5926207928524354 0.9741294138891221 10 52.42247047822571 34.47655567990081 4.28107420497951 8.819899636893966 11 34.01166033886063 25.07915987592056 23.04302869768346 17.866151087535354 12 33.48068821072802 18.42369194990356 25.138853265826512 22.956766573541913 13 25.76672651341146 18.408222275640842 28.876878645293598 26.948172565654104 14 25.99031793918635 20.108621266719037 29.403997731881216 24.497063062213396 15 26.57356491454874 19.77260153914633 28.01661523527132 25.637218311033617 16 30.675271409396593 22.633341116093867 25.46515412741261 21.226233347096933 17 32.55636079650995 21.788259839920503 22.72098343422168 22.93439592934787 18 30.062235247163986 22.310605755638953 23.902026929884997 23.72513206731206 19 28.632181753145403 23.529202029345225 24.590053632037982 23.24856258547139 20 27.236805633031725 26.208676129429993 22.960274566590332 23.59424367094795 21 28.032659990361648 24.99502555084117 26.629807819489027 20.342506639308155 22 27.118338982544 24.57947214480995 25.33892388575214 22.963264986893908 23 29.87205601747326 24.378308871311862 24.991517557792747 20.758117553422135 24 30.453290209939006 24.592526479596707 22.883788816518162 22.070394493946125 25 29.277479949806946 21.926221730464217 23.410562854609214 25.385735465119623 26 26.65459380315903 22.243723855387877 24.758954871107132 26.342727470345956 27 25.874036595843545 22.195129525454803 24.47066685222608 27.460167026475574 28 29.196796109693217 24.552500853995028 21.68117978981946 24.569523246492295 29 30.024222404458946 24.870348027415254 21.838809444667447 23.266620123458353 30 30.369903489935513 23.4331635311343 23.030491935641553 23.166441043288636 31 31.39872309053037 23.325163351709083 22.860613059165466 22.41550049859508 32 32.81710244374847 22.113755588347942 23.210607250849108 21.858534717054482 33 32.87432298609569 22.429992535450857 23.447195503327993 21.248488975125454 34 28.93611197053746 24.859248967442372 26.0163691006771 20.188269961343067 35 27.6065250971024 28.557421245556064 24.612309260066503 19.223744397275038 36 28.525389243458164 27.895388196811062 22.52988407520677 21.049338484524 37 27.83839768679488 30.08006275281991 21.764509001740194 20.317030558645016 38 30.01875913659665 27.60940050124045 21.495371174418565 20.876469187744338 39 28.812297068352954 25.73429195473424 20.909996399994018 24.54341457691879 40 28.19575291307193 25.915384907348727 22.14147448423876 23.74738769534058 41 25.025504834704513 26.52508560078119 21.735927484607963 26.71348207990633 42 23.98207818108835 25.505812341924656 23.62696577003898 26.88514370694801 43 24.616794890521863 24.57366382845109 23.930780971265513 26.878760309761535 44 26.396612543893045 23.072932900719195 23.128600724831873 27.401853830555883 45 26.079858024045276 24.620130359322005 23.349374254551478 25.950637362081242 46 26.24473369732116 25.64900746799963 22.931808065623624 25.17445076905559 47 26.006535218524963 25.324719389310168 23.825771212143867 24.842974180021002 48 25.69696920902233 25.622323717598512 23.828301567785353 24.85240550559381 49 27.565119277514455 23.989554231847286 23.52667167370374 24.91865481693452 50 25.655563389434384 24.592756511927753 23.33396208837152 26.417718010266345 51 23.509246724627147 25.868975884560573 23.89616110544337 26.725616285368908 52 24.3381107214619 25.444106169122072 25.207057851981098 25.010725257434935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 38.0 2 76.0 3 56.5 4 37.0 5 58.0 6 79.0 7 1057.5 8 2036.0 9 2492.5 10 2949.0 11 3662.5 12 4376.0 13 3874.5 14 3504.5 15 3636.0 16 4000.5 17 4365.0 18 4704.0 19 5043.0 20 6647.0 21 8251.0 22 10727.0 23 13203.0 24 15125.5 25 17048.0 26 19417.5 27 21787.0 28 23776.0 29 25765.0 30 28021.0 31 30277.0 32 33546.5 33 36816.0 34 35952.5 35 35089.0 36 39081.0 37 43073.0 38 46349.5 39 50459.5 40 51293.0 41 55925.5 42 60558.0 43 61287.0 44 62016.0 45 68441.0 46 74866.0 47 81459.0 48 88052.0 49 92495.0 50 96938.0 51 106029.0 52 115120.0 53 128242.5 54 141365.0 55 144072.5 56 146780.0 57 140763.5 58 134747.0 59 134973.0 60 135199.0 61 117554.0 62 99909.0 63 86022.5 64 56719.5 65 41303.0 66 35454.0 67 29605.0 68 30430.5 69 31256.0 70 29591.5 71 27927.0 72 21478.0 73 15029.0 74 9976.0 75 4923.0 76 3326.5 77 1730.0 78 1275.5 79 821.0 80 533.0 81 245.0 82 172.0 83 99.0 84 71.0 85 43.0 86 26.5 87 10.0 88 7.0 89 5.5 90 7.0 91 3.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1738886.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.970460278213856 #Duplication Level Percentage of deduplicated Percentage of total 1 73.69240357492366 8.821319897997284 2 9.159439288999499 2.1928540835935975 3 3.4174825105374245 1.2272651593163642 4 1.6613201269861348 0.7954706635793892 5 0.9404837459148883 0.5629011661389972 6 0.6396128986689014 0.4593876478169585 7 0.48440523761894516 0.4058987558833429 8 0.37344192663556297 0.3576217399208528 9 0.3193178479175121 0.34401434531591807 >10 5.4818928564235705 17.63888970392606 >50 2.373231392579741 19.856157515306265 >100 1.3438200074317832 31.607860922942514 >500 0.0837781015023756 6.54448429713552 >1k 0.025037133782319147 5.035810324121057 >5k 0.002888900051806055 1.9576566384248661 >10k+ 0.0014444500259030275 2.192407138581036 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAGTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 15465 0.8893624998993609 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 11341 0.6521991665928646 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 11233 0.6459882936546731 No Hit AAAGTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 7219 0.4151508494518905 No Hit AAAGTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 5977 0.34372581066268865 No Hit AAAGTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5331 0.3065755891990619 No Hit AAAGTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 5268 0.30295257998511693 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5147 0.29599410197103204 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 5024 0.2889206077914251 No Hit AAAGTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4512 0.2594764694177767 No Hit AAAGTTGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 4072 0.23417291300292256 No Hit AAAGTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 3069 0.1764923059936074 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2789 0.16039004282051844 No Hit AAAGTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTAAAGTTGGGAAG 2766 0.15906735691701468 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 2684 0.15435169413061006 No Hit AAAGTTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2522 0.14503538472332286 No Hit AAAGTTGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 2170 0.12479253959143959 No Hit AAAGTTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 2030 0.11674140800489509 No Hit AAAGTTGGGGAGTGCAGTGCTAAAGTTGGGAAAAAAAAAAAAAAAAAAAAAA 2013 0.11576377059795753 No Hit AAAGTTGGGGGGCTGGTGAGATGGCTCAGCGGGTAAGAGCACCCGACTGCTC 1915 0.1101279784873764 No Hit AAAGTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGGCTGCT 1915 0.1101279784873764 No Hit AAAGTTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1914 0.11007047040461537 No Hit AAAGTTGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTT 1900 0.10926535724596093 No Hit AAAGTTGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTCT 1851 0.10644746119067033 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.450484965661924E-4 0.0 0.0 0.0 0.0 8 0.0016102263173088977 0.0 0.0 0.0 0.0 9 0.0032779607173788277 0.0 0.0 0.0 0.0 10 0.033872260746247884 0.0 0.0 0.0 0.0 11 0.07619820965836749 0.0 0.0 0.0 0.0 12 0.10518228336992765 0.0 0.0 0.0 0.0 13 0.12134205462577766 0.0 0.0 0.0 0.0 14 0.13853697137132623 0.0 0.0 0.0 0.0 15 0.15987247007566913 0.0 0.0 0.0 0.0 16 0.18373832442149743 0.0 0.0 0.0 0.0 17 0.2007032088360019 0.0 0.0 0.0 0.0 18 0.21709301242289603 0.0 0.0 0.0 0.0 19 0.23704831714097416 0.0 0.0 0.0 0.0 20 0.2586138481763612 0.0 0.0 0.0 0.0 21 0.27805158014959 0.0 0.0 0.0 0.0 22 0.29817940911595125 0.0 0.0 0.0 0.0 23 0.3237129978618495 0.0 0.0 0.0 0.0 24 0.3492465866077477 0.0 0.0 0.0 0.0 25 0.3717897550500723 0.0 0.0 0.0 0.0 26 0.392780205257849 0.0 0.0 0.0 0.0 27 0.41515084945189046 0.0 0.0 0.0 0.0 28 0.44810298087396183 0.0 0.0 0.0 0.0 29 0.4672531724333855 0.0 0.0 0.0 0.0 30 0.48881870346877254 0.0 0.0 0.0 0.0 31 0.5063586687108873 0.0 0.0 0.0 0.0 32 0.5238986339530021 0.0 0.0 0.0 0.0 33 0.5406334860364624 0.0 0.0 0.0 0.0 34 0.5598411856786472 0.0 0.0 0.0 0.0 35 0.595553705073248 0.0 0.0 0.0 0.0 36 0.6208572614881022 0.0 0.0 0.0 0.0 37 0.6450106562477356 0.0 0.0 0.0 0.0 38 0.6657135660417072 0.0 0.0 0.0 0.0 39 0.6893493880564914 0.0 0.0 0.0 0.0 40 0.7133302585678417 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAA 35 1.0199801E-7 46.000004 18 ACGCAAT 35 1.0199801E-7 46.000004 32 AAATCGC 20 6.312353E-4 46.0 16 CGAGTTA 20 6.312353E-4 46.0 33 ATAGCGG 20 6.312353E-4 46.0 36 CACGACG 25 3.4178844E-5 46.0 23 TAACGCG 20 6.312353E-4 46.0 20 CGTTCGA 20 6.312353E-4 46.0 41 TCGATAA 20 6.312353E-4 46.0 44 CGTACGT 20 6.312353E-4 46.0 22 TTACGCC 30 1.8619576E-6 46.0 25 ATACGCC 30 1.8619576E-6 46.0 33 GGTTATA 45 3.110472E-10 46.0 9 CGATAGT 20 6.312353E-4 46.0 13 TACGTCG 40 5.6134013E-9 46.0 44 TACCGAT 30 1.8619576E-6 46.0 45 TTGGGAC 9790 0.0 42.73442 5 TTGGGAT 17780 0.0 42.571995 5 CGCATTA 60 1.8189894E-12 42.166668 33 TGGGATT 6365 0.0 41.91673 6 >>END_MODULE