##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527519_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1499021 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.647181727274003 31.0 28.0 33.0 25.0 33.0 2 30.508796741339847 31.0 31.0 33.0 26.0 34.0 3 31.53839806113457 33.0 31.0 34.0 28.0 34.0 4 35.804271587923054 37.0 35.0 37.0 33.0 37.0 5 36.0356005686378 37.0 35.0 37.0 35.0 37.0 6 36.35199039906713 37.0 37.0 37.0 35.0 37.0 7 36.433821140597765 37.0 37.0 37.0 35.0 37.0 8 36.551023634758955 37.0 37.0 37.0 35.0 37.0 9 38.521019385318816 39.0 39.0 39.0 37.0 39.0 10 37.23366917474805 39.0 37.0 39.0 34.0 39.0 11 37.072830200510865 39.0 37.0 39.0 34.0 39.0 12 36.86639413323763 39.0 35.0 39.0 33.0 39.0 13 36.68984623964574 39.0 35.0 39.0 33.0 39.0 14 37.52586721600298 39.0 37.0 40.0 33.0 40.0 15 37.63179701952141 40.0 37.0 40.0 33.0 40.0 16 37.786022343916464 40.0 37.0 40.0 33.0 40.0 17 37.76754895361706 40.0 37.0 40.0 34.0 40.0 18 37.579525570355585 40.0 36.0 40.0 33.0 40.0 19 37.51659116183162 39.0 36.0 40.0 33.0 40.0 20 37.3979937572589 39.0 36.0 40.0 33.0 40.0 21 37.365607953457626 39.0 36.0 40.0 33.0 40.0 22 37.159772945142194 39.0 36.0 40.0 33.0 40.0 23 37.015566826615505 38.0 36.0 40.0 33.0 40.0 24 36.78548399255247 38.0 35.0 40.0 32.0 40.0 25 36.37682193911893 38.0 35.0 40.0 32.0 40.0 26 35.645396562156236 37.0 35.0 39.0 31.0 40.0 27 35.349716915240016 37.0 34.0 39.0 30.0 40.0 28 35.18903937970182 36.0 34.0 39.0 30.0 40.0 29 34.79792811441601 36.0 34.0 38.0 29.0 40.0 30 34.40981814130689 36.0 33.0 38.0 27.0 40.0 31 34.26167545351266 35.0 33.0 38.0 27.0 40.0 32 33.90770176001537 35.0 33.0 38.0 26.0 40.0 33 33.29844211655474 35.0 32.0 38.0 24.0 39.0 34 32.70640104441499 35.0 31.0 38.0 22.0 39.0 35 32.40331656461117 35.0 31.0 38.0 21.0 39.0 36 31.92519050767134 34.0 31.0 37.0 21.0 39.0 37 31.372938738016344 34.0 30.0 37.0 18.0 39.0 38 30.631889079605955 34.0 29.0 37.0 15.0 38.0 39 29.584145919236622 33.0 27.0 36.0 10.0 38.0 40 29.12209168517319 33.0 26.0 36.0 10.0 38.0 41 28.578085964105906 32.0 24.0 35.0 10.0 38.0 42 28.135828650832778 32.0 24.0 35.0 9.0 38.0 43 27.61468985424487 31.0 23.0 35.0 9.0 37.0 44 27.180356379263532 31.0 23.0 34.0 9.0 37.0 45 26.69934977562022 30.0 22.0 34.0 9.0 36.0 46 26.584620895904727 30.0 22.0 34.0 9.0 36.0 47 26.20427932630697 30.0 21.0 34.0 9.0 36.0 48 25.733845623243436 29.0 20.0 33.0 8.0 35.0 49 25.08317762059371 28.0 20.0 33.0 8.0 35.0 50 27.113185872646213 31.0 22.0 34.0 8.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 12.0 12 37.0 13 75.0 14 135.0 15 229.0 16 404.0 17 724.0 18 1311.0 19 2210.0 20 3679.0 21 5598.0 22 8231.0 23 11499.0 24 16517.0 25 22777.0 26 31837.0 27 44256.0 28 58865.0 29 70994.0 30 70839.0 31 68320.0 32 83149.0 33 119016.0 34 163423.0 35 292360.0 36 328387.0 37 90985.0 38 3141.0 39 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.42535828383991 0.2758467026145731 0.22648115003058664 0.07231386351492074 8 99.10901848606524 0.5105999182132872 0.21720843136954052 0.16317316435193369 9 97.26354734189849 1.5378036731973734 0.5865161328627151 0.6121328520414324 10 60.1572626400831 29.039686568767216 4.0124854821913765 6.790565308958313 11 35.85293334783168 34.57863498910289 16.288964597560675 13.279467065504752 12 34.948342951833226 26.537253313996267 21.81803990737955 16.696363826790954 13 23.721949192172758 28.21908432236773 25.430197442197272 22.62876904326224 14 24.74374942045508 31.670203419431747 21.638389322097556 21.947657838015612 15 22.513693937576594 32.36218838828809 21.808633768306116 23.315483905829204 16 26.850457732079803 34.99323892060218 20.4915074572004 17.664795890117617 17 30.705440417445786 32.19901522393616 17.91949545736851 19.176048901249548 18 25.968949067424674 32.687600774105235 22.28200939146283 19.06144076700727 19 27.09428353572098 32.39480967911724 19.972435342800402 20.53847144236138 20 21.73538596190447 35.43325944066161 20.245613637167192 22.585740960266733 21 23.884255123844163 34.64034192983287 24.274376409670044 17.201026536652922 22 22.9551820821723 35.70130104915141 20.834731468071492 20.508785400604797 23 23.992258947673182 34.230207582148616 23.90286727137245 17.874666198805752 24 27.040982080971514 33.58598712092759 19.23161850300963 20.141412295091264 25 22.977063029804118 30.807440322717294 21.05374107500829 25.1617555724703 26 24.365035579888474 30.09590926344594 23.97865006560949 21.560405091056094 27 23.824482779093824 29.748816060615564 23.236632442107215 23.1900687181834 28 30.054282094780525 32.5748605256364 18.22896410390515 19.141893275677926 29 32.415423132831364 31.53818392137268 17.411830788227782 18.634562157568173 30 31.909359508639305 32.11509378454338 16.98555257064444 18.989994136172875 31 32.45885147706403 31.717033984180343 17.376607799357046 18.44750673939858 32 31.499225160955053 32.98406093043393 18.54163484033913 16.975079068271892 33 31.10736940976811 34.871692924915656 16.559341063267293 17.46159660204894 34 25.263288506298444 37.40421248268036 18.940161612145527 18.392337398875664 35 24.28218150379481 39.846273000845216 19.576643689447977 16.294901805911994 36 25.547007013243977 39.41545848924065 16.656337703074207 18.38119679444117 37 25.45608100220077 39.148284113431366 17.60975997000709 17.78587491436077 38 28.507405833540687 36.733174518569115 16.717711092773214 18.041708555116973 39 26.755195557633947 35.17542449371957 17.273673951198816 20.795705997447666 40 26.929442616214182 33.873441399420024 18.59807167477974 20.599044309586056 41 26.037994130836058 33.3940618577058 19.165041717227442 21.402902294230703 42 25.667685776249964 31.902354936988875 20.073968276628545 22.355991010132612 43 26.560268335133397 30.662545754862673 20.420861348840344 22.35632456116359 44 25.739732798940107 30.1148549620052 19.888847454438597 24.256564784616092 45 26.640854264216447 30.72051692404576 20.366625951204153 22.27200286053364 46 26.141928632087208 32.100884510623935 20.816319451161792 20.940867406127065 47 26.63845269679344 30.99209417346388 19.996851278267616 22.372601851475064 48 26.718705074845516 30.597036332379602 20.313658047485657 22.370600545289225 49 26.545391959152003 30.767414199000548 20.516924045760533 22.170269796086913 50 24.719867166637425 29.683773609575848 21.76133623211416 23.835022991672563 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 41.0 4 82.0 5 62.5 6 43.0 7 69.5 8 96.0 9 894.0 10 1692.0 11 3194.0 12 4696.0 13 4356.0 14 4016.0 15 3957.5 16 3899.0 17 4880.0 18 5861.0 19 7501.0 20 9141.0 21 12141.5 22 15142.0 23 19292.5 24 23443.0 25 29073.5 26 34704.0 27 38595.0 28 42486.0 29 44312.0 30 46138.0 31 45894.5 32 45651.0 33 48638.0 34 51625.0 35 56364.0 36 61103.0 37 59573.5 38 58044.0 39 56770.0 40 55496.0 41 53390.5 42 51285.0 43 49130.5 44 46976.0 45 50002.5 46 53029.0 47 55194.5 48 57360.0 49 58606.5 50 59853.0 51 65828.5 52 71804.0 53 78585.5 54 85367.0 55 96129.0 56 106891.0 57 101451.0 58 96011.0 59 95200.0 60 94389.0 61 91877.5 62 89366.0 63 78734.5 64 68103.0 65 58026.0 66 47949.0 67 39881.5 68 31814.0 69 28641.0 70 25468.0 71 21533.5 72 17599.0 73 20112.5 74 22626.0 75 14432.5 76 6239.0 77 4167.5 78 2096.0 79 1640.5 80 1185.0 81 679.0 82 173.0 83 122.0 84 71.0 85 39.0 86 7.0 87 4.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1499021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.425895042629367 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41152401326993 18.837119217527327 2 7.977753941211882 3.7377205300550465 3 2.8412462881353435 1.9967621200835652 4 1.3266767733943416 1.2431436339612014 5 0.8154757083057858 0.955162417629259 6 0.5778419349092633 0.8121878711048562 7 0.396217895011608 0.649723117578743 8 0.3009413571198994 0.5639856516701764 9 0.25944053166106074 0.5469863998046374 >10 3.648745409907804 21.205255725033105 >50 0.9274458065479253 14.880887254990919 >100 0.47425822876149026 21.744006860814665 >500 0.02540153629389715 3.887864643840228 >1k 0.014721344897599482 5.7900755853991095 >5k 0.0023092305721724676 3.149118970507222 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAA 7459 0.4975914280053448 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAA 6316 0.4213416623249441 No Hit ATGCTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGA 5891 0.39298982469224913 No Hit ATGCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 5723 0.38178251005156033 No Hit ATGCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 5707 0.3807151467524471 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 5237 0.3493613498409962 No Hit ATGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 5202 0.34702649262418606 No Hit ATGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5036 0.33595259839588637 No Hit ATGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 4798 0.3200755693215772 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAA 4204 0.2804497068419989 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAA 3774 0.25176431817833106 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAA 3697 0.24662763230134868 No Hit ATGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3547 0.23662110137216225 No Hit ATGCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 3530 0.2354870278668544 No Hit ATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3161 0.21087096178105577 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGTAAAAAAAAAAAAAAAAA 2329 0.15536807022716825 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGAAAAAAAAAAAAAAAAAAAA 2271 0.15149887826788283 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGGAAAAAAAAAAAAAAAA 2247 0.14989783331921303 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAA 2133 0.1422928698130313 No Hit ATGCTTGGGCAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAA 1914 0.1276833346564191 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 1798 0.11994495073784824 No Hit ATGCTTGGGAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAA 1663 0.11093907290158043 No Hit ATGCTTGGGGGGGCTGGAGAGATGGCTCAGTGGTTATGAGCACCGACTGC 1615 0.10773698300424077 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTG 1512 0.10086583176619941 No Hit ATGCTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1511 0.10079912156000483 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGCAAAAAAAAAAAAAAAA 1504 0.1003321501166428 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.002668408247783053 0.0 0.0 0.0 0.0 8 0.004336163402647461 0.0 0.0 0.0 0.0 9 0.007071281856625091 0.0 0.0 0.0 0.0 10 0.07951856578393499 0.0 0.0 0.0 0.0 11 0.22648115003058664 0.0 0.0 0.0 0.0 12 0.3091350955056667 0.0 0.0 0.0 0.0 13 0.37864713036041525 0.0 0.0 0.0 0.0 14 0.46336909222752715 0.0 0.0 0.0 0.0 15 0.5608327034778032 0.0 0.0 0.0 0.0 16 0.6667685109147904 0.0 0.0 0.0 0.0 17 0.7411503908217429 0.0 0.0 0.0 0.0 18 0.8147317482543607 0.0 0.0 0.0 0.0 19 0.8877794240374217 0.0 0.0 0.0 0.0 20 0.9717008634301988 0.0 0.0 0.0 0.0 21 1.056823086534478 0.0 0.0 0.0 0.0 22 1.1594233836617365 0.0 0.0 0.0 0.0 23 1.2749654607907428 0.0 0.0 0.0 0.0 24 1.3970451381268174 0.0 0.0 0.0 0.0 25 1.5186578440195302 0.0 0.0 0.0 0.0 26 1.6586825668219458 0.0 0.0 0.0 0.0 27 1.79737308550047 0.0 0.0 0.0 0.0 28 1.951540372016136 0.0 0.0 0.0 0.0 29 2.0629464163610782 0.0 0.0 0.0 0.0 30 2.164546060395418 0.0 0.0 0.0 0.0 31 2.251936430510313 0.0 0.0 0.0 0.0 32 2.3421286292853805 0.0 0.0 0.0 0.0 33 2.431587015792307 0.0 0.0 0.0 0.0 34 2.521979345185958 0.0 0.0 0.0 0.0 35 2.6374547121087697 0.0 0.0 0.0 0.0 36 2.7263127067599453 0.0 0.0 0.0 0.0 37 2.8191733137827955 0.0 0.0 0.0 0.0 38 2.900960026577346 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTCGTC 30 2.5282334E-6 44.000004 39 AGTACGG 30 2.5282334E-6 44.000004 12 TAATCGT 30 2.5282334E-6 44.000004 30 AACGTTG 25 4.443491E-5 44.0 18 AAGTACG 25 4.443491E-5 44.0 44 GTACCGG 35 1.4464786E-7 44.0 26 ACGTTTA 20 7.85725E-4 44.0 10 ACGTTAG 20 7.85725E-4 44.0 39 CGATTAC 20 7.85725E-4 44.0 44 TACGGAA 35 1.4464786E-7 44.0 31 TATGCGC 25 4.443491E-5 44.0 40 TACGCAC 45 4.802132E-10 44.0 16 TAATTCG 20 7.85725E-4 44.0 43 CGTAGCA 20 7.85725E-4 44.0 32 AACGATA 45 4.802132E-10 44.0 44 CATACGT 25 4.443491E-5 44.0 30 CGTAATT 35 1.4464786E-7 44.0 40 CATAACG 25 4.443491E-5 44.0 33 TATAGGG 20 7.85725E-4 44.0 13 CATCGCG 25 4.443491E-5 44.0 28 >>END_MODULE