##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527518_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1280997 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.430809752091534 31.0 31.0 33.0 30.0 34.0 2 32.08728435741848 33.0 31.0 34.0 30.0 34.0 3 32.63973998377826 34.0 31.0 34.0 31.0 34.0 4 36.28010604240291 37.0 37.0 37.0 35.0 37.0 5 36.354485607694635 37.0 37.0 37.0 35.0 37.0 6 36.531523493029255 37.0 37.0 37.0 35.0 37.0 7 36.56295604127098 37.0 37.0 37.0 35.0 37.0 8 36.62697804912892 37.0 37.0 37.0 35.0 37.0 9 38.6370709689406 39.0 39.0 39.0 39.0 39.0 10 37.63573685184274 39.0 37.0 39.0 35.0 39.0 11 37.55599739890101 39.0 37.0 39.0 35.0 39.0 12 37.28158145569427 39.0 37.0 39.0 35.0 39.0 13 37.10399946291834 39.0 37.0 39.0 34.0 39.0 14 37.941739910397914 40.0 38.0 40.0 34.0 40.0 15 38.10797293045963 40.0 38.0 40.0 35.0 40.0 16 38.248659442606034 40.0 38.0 40.0 35.0 40.0 17 38.29510685817375 40.0 38.0 40.0 35.0 40.0 18 38.17059758922152 40.0 38.0 40.0 35.0 40.0 19 38.09556618789896 40.0 38.0 40.0 34.0 40.0 20 38.121846499250196 40.0 38.0 40.0 34.0 40.0 21 38.09139677922743 40.0 38.0 40.0 34.0 40.0 22 38.03754185216671 40.0 38.0 40.0 34.0 40.0 23 37.96725675391902 40.0 38.0 40.0 34.0 40.0 24 37.82416274198925 39.0 37.0 40.0 34.0 40.0 25 37.5857624959309 39.0 37.0 40.0 34.0 40.0 26 37.29399834660035 39.0 35.0 40.0 34.0 40.0 27 37.163325128786404 39.0 35.0 40.0 33.0 40.0 28 37.02408046232739 39.0 35.0 40.0 33.0 40.0 29 36.92354158518716 39.0 35.0 40.0 33.0 40.0 30 36.6396627002249 39.0 35.0 40.0 33.0 40.0 31 36.478430472514766 39.0 35.0 40.0 32.0 40.0 32 36.052105508443816 38.0 35.0 40.0 31.0 40.0 33 35.60977035855665 38.0 35.0 40.0 30.0 40.0 34 35.03219679671381 38.0 35.0 40.0 25.0 40.0 35 34.69891732767524 38.0 34.0 40.0 23.0 40.0 36 34.33783763740274 38.0 34.0 40.0 21.0 40.0 37 33.852049614479974 37.0 34.0 40.0 18.0 40.0 38 33.60601703204613 38.0 33.0 40.0 15.0 40.0 39 33.07814304014764 37.0 33.0 40.0 10.0 40.0 40 32.54460549087937 37.0 33.0 40.0 10.0 40.0 41 32.15739459186868 37.0 32.0 40.0 9.0 40.0 42 31.788089277336326 36.0 31.0 40.0 9.0 40.0 43 31.582976384800276 35.0 31.0 40.0 9.0 40.0 44 31.340811102602114 35.0 31.0 40.0 8.0 40.0 45 31.17857887255005 35.0 30.0 40.0 8.0 40.0 46 31.023907940455754 35.0 30.0 40.0 8.0 40.0 47 30.85783885520419 35.0 30.0 39.0 8.0 40.0 48 30.637369174166682 35.0 29.0 39.0 8.0 40.0 49 30.411872939593145 35.0 28.0 39.0 8.0 40.0 50 30.529085548209714 35.0 29.0 39.0 8.0 40.0 51 30.502496883287 35.0 29.0 39.0 8.0 40.0 52 30.14544296356666 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 15.0 12 25.0 13 49.0 14 56.0 15 87.0 16 199.0 17 367.0 18 664.0 19 1204.0 20 1878.0 21 3412.0 22 5482.0 23 9078.0 24 13784.0 25 20209.0 26 30366.0 27 43415.0 28 52906.0 29 48573.0 30 32706.0 31 25392.0 32 28757.0 33 37956.0 34 72138.0 35 78965.0 36 133414.0 37 204194.0 38 342104.0 39 93599.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.46799250895981 0.26198343946160685 0.20140562390075856 0.06861842767781658 8 99.12357327925045 0.511008222501692 0.21584750003317726 0.14957099821467185 9 97.32021230338557 1.5152260309743113 0.5746305416796448 0.5899311239604776 10 60.73410007985968 28.599988914884268 3.972218514172945 6.693692491083117 11 36.127094755100906 34.60921454148605 16.089030653467574 13.174660049945471 12 34.7466075252323 27.100375722972032 21.579753894817866 16.57326285697781 13 23.713170288455007 28.87204263554091 25.22066796409359 22.19411911191049 14 24.621915586063043 32.164009751779275 21.519176079257015 21.694898582900663 15 22.153681858739716 33.21483188485219 21.584281618145866 23.04720463826223 16 26.564543086361635 35.69391653532365 20.163825520278344 17.57771485803636 17 30.266425292174766 32.99828180706122 17.721665234188684 19.01362766657533 18 25.478357872813127 33.505933269164565 22.09177695185859 18.923931906163716 19 26.95158536671046 33.30359087492008 19.450709096118104 20.294114662251356 20 21.68599926463528 35.99579077858886 19.969133417174277 22.349076539601576 21 23.691780698939965 35.46854520346262 23.732217952110737 17.10745614548668 22 22.82909327656505 36.49766549023924 20.70855747515412 19.964683758041588 23 23.89849468812183 34.746685589427614 23.63354480923843 17.72127491321213 24 26.880546948978022 34.12107912821029 19.00277674342719 19.995597179384493 25 22.89248140315707 31.613344918059916 20.771477216574276 24.72269646220873 26 23.88210120710665 30.971657232608663 23.8628974150603 21.283344145224383 27 23.657822773979955 30.561586014643282 23.063988440253958 22.716602771122805 28 29.856900523576556 33.00874240923281 18.047427121218863 19.08692994597177 29 31.97087893258142 32.26721061797959 17.30909596197337 18.45281448746562 30 31.68524204194077 32.49547032506712 16.93157751345241 18.8877101195397 31 32.160887183966864 32.357608956149 17.206831866116783 18.274671993767356 32 31.5251323773592 33.60538705398998 18.143211888864688 16.726268679786134 33 30.809674027339646 35.47361937615779 16.328609668875103 17.388096927627466 34 25.391160166651446 37.801805937094315 18.73813912132503 18.068894774929216 35 24.56680226417392 39.917814015177235 19.41425311690816 16.10113060374068 36 25.824962899991178 39.60102951060775 16.41650995279458 18.157497636606486 37 26.269616556479054 39.21952978812597 16.99199920062264 17.518854454772338 38 28.87563358852519 37.00828339176439 16.40331710378713 17.7127659159233 39 27.58999435595868 35.37916169983224 16.770062693355253 20.260781250853828 40 27.987341110088472 33.821624874999706 18.016982085047818 20.174051929864003 41 27.293350413779265 32.937469798914435 18.866945043587144 20.90223474371915 42 27.31606709461459 31.2940623592405 19.68349652653363 21.70637401961129 43 28.11591283976465 29.854948918693797 20.312303619758673 21.716834621782876 44 27.313412911974034 29.271887443920637 19.837517183880994 23.577182460224343 45 28.2810966770414 29.402098521698335 20.152506211958343 22.164298589301925 46 27.086324167816162 31.22731747225013 20.637831314202923 21.048527045730786 47 27.631758700449726 29.790858214343984 19.878110565442388 22.699272519763902 48 27.792414814398477 29.22473666995317 20.3320538611722 22.65079465447616 49 27.801938646226336 28.719505197904443 20.920501765421776 22.55805439044744 50 24.7826497642071 29.473136939430773 21.63135432791802 24.112858968444108 51 24.519339233425214 29.850108938584558 21.6311981995274 23.99935362846283 52 25.078278871847477 28.96220678112439 21.73478938670426 24.224724960323872 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 39.5 4 79.0 5 59.0 6 39.0 7 59.0 8 79.0 9 828.0 10 1577.0 11 2845.5 12 4114.0 13 3732.5 14 3099.5 15 2848.0 16 3331.0 17 3814.0 18 4247.5 19 4681.0 20 5456.5 21 6232.0 22 8054.0 23 9876.0 24 11946.0 25 14016.0 26 18100.0 27 22184.0 28 26736.0 29 31288.0 30 35860.5 31 40433.0 32 46469.5 33 52506.0 34 57526.0 35 62546.0 36 60489.5 37 58433.0 38 55181.0 39 48546.0 40 45163.0 41 44067.0 42 42971.0 43 41711.0 44 40451.0 45 43739.5 46 47028.0 47 44862.5 48 42697.0 49 44207.0 50 45717.0 51 51189.5 52 56662.0 53 59795.0 54 62928.0 55 72147.5 56 81367.0 57 85895.5 58 90424.0 59 81441.0 60 72458.0 61 73151.5 62 73845.0 63 66679.0 64 52550.5 65 45588.0 66 37881.5 67 30175.0 68 26935.0 69 23695.0 70 20809.0 71 17923.0 72 18426.5 73 18930.0 74 14000.0 75 9070.0 76 5879.5 77 2689.0 78 1760.0 79 831.0 80 777.5 81 724.0 82 402.0 83 80.0 84 57.0 85 34.0 86 20.0 87 6.0 88 4.5 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1280997.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.496397162728215 #Duplication Level Percentage of deduplicated Percentage of total 1 78.69925089272208 17.70449604491869 2 8.235102395904303 3.705202683479958 3 2.9429191500431915 1.9861523405151054 4 1.463781210439519 1.3171921387754586 5 0.9093428439949724 1.0228468887797852 6 0.6185723778658386 0.8349389931817858 7 0.47964847887500656 0.755325387548942 8 0.39540150517565775 0.7116087439337706 9 0.3196565176413387 0.6472007978862773 >10 4.513432961930113 24.692954835836776 >50 0.8968805329505116 13.705342144766306 >100 0.48503689644055836 20.95220830869369 >500 0.025915328762888934 4.0828227309459875 >1k 0.014358492963222247 6.940081708296162 >5k 7.004142908888901E-4 0.9416262524413185 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAA 6444 0.5030456745800341 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAA 5508 0.42997758776952644 No Hit ATGCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4935 0.38524680385668353 No Hit ATGCTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGAAG 4927 0.38462229029420053 No Hit ATGCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 4865 0.3797823101849575 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4518 0.35269403441225855 No Hit ATGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4330 0.33801796569390874 No Hit ATGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 4168 0.32537156605362855 No Hit ATGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4051 0.31623805520231507 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAA 3471 0.2709608219222996 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAA 3468 0.2707266293363685 No Hit ATGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 3364 0.26260795302408985 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAAA 3184 0.24855639786822295 No Hit ATGCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2996 0.23388032914987308 No Hit ATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2672 0.20858752986931273 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGTAAAAAAAAAAAAAAAAAAA 2075 0.16198320526902094 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGGAAAAAAAAAAAAAAAAAA 2021 0.15776773872226085 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGAAAAAAAAAAAAAAAAAAAAAA 1966 0.15347420798019043 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAAA 1889 0.14746326494129183 No Hit ATGCTTGGGCAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAA 1648 0.12864979387149228 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1553 0.12123369531700698 No Hit ATGCTTGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA 1451 0.11327114739534908 Illumina Single End Adapter 2 (97% over 34bp) ATGCTTGGGGGGGCTGGAGAGATGGCTCAGTGGTTATGAGCACCGACTGCTC 1439 0.11233437705162462 No Hit ATGCTTGGGAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAA 1399 0.10921180923920977 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGCAAAAAAAAAAAAAAAAAA 1347 0.10515247108307045 No Hit ATGCTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1341 0.10468408591120823 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.001639348101517802 0.0 0.0 0.0 0.0 8 0.005074172695174149 0.0 0.0 0.0 0.0 9 0.009367703437244584 0.0 0.0 0.0 0.0 10 0.08797834811478872 0.0 0.0 0.0 0.0 11 0.2440286745402214 0.0 0.0 0.0 0.0 12 0.33825215827983984 0.0 0.0 0.0 0.0 13 0.4155357116371077 0.0 0.0 0.0 0.0 14 0.5093688744001742 0.0 0.0 0.0 0.0 15 0.6184245552487633 0.0 0.0 0.0 0.0 16 0.7338034359174924 0.0 0.0 0.0 0.0 17 0.8184250236339351 0.0 0.0 0.0 0.0 18 0.8968014757255481 0.0 0.0 0.0 0.0 19 0.979549522754542 0.0 0.0 0.0 0.0 20 1.066513036330296 0.0 0.0 0.0 0.0 21 1.159019107773086 0.0 0.0 0.0 0.0 22 1.26065869006719 0.0 0.0 0.0 0.0 23 1.3625324649472248 0.0 0.0 0.0 0.0 24 1.4623765707491898 0.0 0.0 0.0 0.0 25 1.5544923212154282 0.0 0.0 0.0 0.0 26 1.6362255337053873 0.0 0.0 0.0 0.0 27 1.7121039315470685 0.0 0.0 0.0 0.0 28 1.8203789704425537 0.0 0.0 0.0 0.0 29 1.880332272440919 0.0 0.0 0.0 0.0 30 1.9378655843846628 0.0 0.0 0.0 0.0 31 1.9774441314070212 0.0 0.0 0.0 0.0 32 2.0231116856635887 0.0 0.0 0.0 0.0 33 2.067920533771742 0.0 0.0 0.0 0.0 34 2.121706764340588 0.0 0.0 0.0 0.0 35 2.2121831667053082 0.0 0.0 0.0 0.0 36 2.2733854958286397 0.0 0.0 0.0 0.0 37 2.3326362200692117 0.0 0.0 0.0 0.0 38 2.387749541958334 0.0 0.0 0.0 0.0 39 2.446375752636423 0.0 0.0 0.0 0.0 40 2.5042993855567186 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGATA 35 1.0196891E-7 46.000004 32 ATTCGTC 35 1.0196891E-7 46.000004 39 AGTATCG 35 1.0196891E-7 46.000004 28 CCGTAAA 35 1.0196891E-7 46.000004 14 AACGATA 70 0.0 46.000004 44 CGTAATT 35 1.0196891E-7 46.000004 40 ACGTAAT 35 1.0196891E-7 46.000004 39 CACGTTA 35 1.0196891E-7 46.000004 38 AATCACG 20 6.3117256E-4 46.0 17 TTTGTCG 20 6.3117256E-4 46.0 42 GAACTAG 30 1.861572E-6 46.0 31 TAGCGAA 20 6.3117256E-4 46.0 32 TTCGTGC 65 0.0 46.0 34 CGTCTAT 20 6.3117256E-4 46.0 41 TGACGTA 25 3.417377E-5 46.0 19 TCGATAG 20 6.3117256E-4 46.0 19 TCGATAA 30 1.861572E-6 46.0 46 TCGGCTA 25 3.417377E-5 46.0 36 GTAGCGT 40 5.6115823E-9 46.0 10 ACCTAAT 25 3.417377E-5 46.0 10 >>END_MODULE