##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527517_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1599814 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.54946950082947 31.0 30.0 31.0 25.0 33.0 2 30.607695644618687 31.0 31.0 33.0 28.0 34.0 3 31.443868474710186 31.0 31.0 34.0 28.0 34.0 4 35.7310943647199 37.0 35.0 37.0 33.0 37.0 5 35.88748879557249 37.0 35.0 37.0 35.0 37.0 6 36.22286965859781 37.0 36.0 37.0 35.0 37.0 7 36.348213604831564 37.0 36.0 37.0 35.0 37.0 8 36.460978588760945 37.0 37.0 37.0 35.0 37.0 9 38.52767384208414 39.0 39.0 39.0 37.0 39.0 10 37.09884524075924 39.0 37.0 39.0 33.0 39.0 11 36.895295328081886 39.0 37.0 39.0 33.0 39.0 12 36.63591517513911 39.0 35.0 39.0 33.0 39.0 13 36.42559447535776 39.0 35.0 39.0 32.0 39.0 14 37.28075138734878 39.0 36.0 40.0 33.0 40.0 15 37.45125120795292 40.0 36.0 40.0 33.0 40.0 16 37.56146464526501 40.0 37.0 40.0 33.0 40.0 17 37.66494604997831 40.0 37.0 40.0 33.0 40.0 18 37.56661524402212 40.0 36.0 40.0 33.0 40.0 19 37.44091875680548 40.0 36.0 40.0 33.0 40.0 20 37.441768230556804 40.0 36.0 40.0 33.0 40.0 21 37.49198719351124 40.0 36.0 40.0 33.0 40.0 22 37.445795573735445 40.0 36.0 40.0 33.0 40.0 23 37.396056041514825 39.0 36.0 40.0 33.0 40.0 24 37.300599944743574 39.0 36.0 40.0 33.0 40.0 25 37.07566442098894 39.0 36.0 40.0 33.0 40.0 26 36.76186856722094 38.0 35.0 40.0 33.0 40.0 27 36.610505971319164 38.0 35.0 40.0 32.0 40.0 28 36.3780264455743 38.0 35.0 40.0 31.0 40.0 29 36.34093900915982 38.0 35.0 40.0 31.0 40.0 30 36.09095119807677 38.0 35.0 40.0 31.0 40.0 31 35.89994774392523 38.0 35.0 40.0 30.0 40.0 32 35.48486324035169 38.0 35.0 40.0 30.0 40.0 33 35.10757625573973 37.0 34.0 40.0 27.0 40.0 34 34.61484710097549 37.0 34.0 40.0 24.0 40.0 35 34.308136445861834 37.0 33.0 40.0 23.0 40.0 36 34.008644129880096 37.0 33.0 40.0 21.0 40.0 37 33.60704431890207 37.0 33.0 40.0 18.0 40.0 38 33.24109740257305 37.0 33.0 40.0 15.0 40.0 39 32.70122901787333 36.0 32.0 40.0 12.0 40.0 40 32.40231301888844 36.0 32.0 40.0 10.0 40.0 41 32.18219743045129 36.0 32.0 40.0 10.0 40.0 42 31.958763331237257 36.0 31.0 40.0 9.0 40.0 43 31.74762628655581 35.0 31.0 40.0 9.0 40.0 44 31.527248167599485 35.0 31.0 40.0 9.0 40.0 45 31.391353619858307 35.0 31.0 40.0 9.0 40.0 46 31.150113700717707 35.0 30.0 40.0 8.0 40.0 47 31.04409887649439 35.0 30.0 39.0 8.0 40.0 48 30.885627329177016 35.0 30.0 39.0 8.0 40.0 49 30.676177980690255 35.0 29.0 39.0 8.0 40.0 50 30.466676751172322 35.0 28.0 39.0 8.0 40.0 51 30.292204593784028 35.0 27.0 39.0 8.0 40.0 52 29.804917946711306 35.0 26.0 38.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 5.0 11 7.0 12 17.0 13 38.0 14 71.0 15 137.0 16 322.0 17 668.0 18 1301.0 19 2338.0 20 3739.0 21 5865.0 22 8979.0 23 13323.0 24 19348.0 25 27086.0 26 38687.0 27 53717.0 28 64958.0 29 61061.0 30 45346.0 31 41077.0 32 48613.0 33 65507.0 34 107771.0 35 115640.0 36 181693.0 37 264761.0 38 370024.0 39 57715.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 100.0 0.0 7 99.4780018177113 0.2540920381994407 0.20808669007772151 0.059819454011528835 8 99.13577453378956 0.5054962639406831 0.22108820150342476 0.1376410007663391 9 97.37381970654089 1.5084253544474546 0.5455009144813084 0.5722540245303516 10 60.239440334938934 29.015935602513792 3.916642809726631 6.82798125282064 11 35.50975300878727 34.4694445729316 16.418096103672053 13.602706314609073 12 34.54382822003058 26.684789606791792 21.800221775781434 16.971160397396197 13 23.391906809166567 28.35204592533882 25.48983819369002 22.766209071804596 14 24.46671925611352 31.617238003917958 21.856853359203008 22.059189380765513 15 22.461423640498207 32.2239960395396 22.03487405410879 23.279706265853406 16 26.74192124834512 34.73610057169146 20.646587665816153 17.87539051414727 17 30.51385973619433 32.198805611152295 17.84051145945716 19.44682319319621 18 25.842191654779867 32.730054868878504 22.125697112289302 19.302056364052323 19 27.036830531549295 32.443771588447156 19.8864367982778 20.63296108172575 20 21.860166244325903 35.41424190562153 20.116526046152867 22.609065803899703 21 24.003790440638724 34.506823918280496 24.067297823371966 17.42208781770881 22 23.002486539060165 35.531943088384025 20.804105977319864 20.661464395235946 23 24.09430096248689 34.14409425095668 23.600556064642515 18.16104872191392 24 26.818117606171715 33.68847878565883 19.26298932250874 20.230414285660707 25 23.141315177889428 30.87271395299704 20.90080471854853 25.085166150565 26 24.362769671974366 30.246703679302716 23.681440467454344 21.70908618126857 27 23.723695379587877 29.88847453516471 22.992735405490887 23.39509467975652 28 29.799089144113005 32.61047846812192 18.170237290084973 19.420195097680104 29 31.958777707908542 31.665868657231407 17.584356681464218 18.790996953395833 30 31.54222928415428 32.17517786442674 17.027166908153074 19.255425943265905 31 32.11560843948109 31.816698691222854 17.445715564434366 18.62197730486169 32 31.41483947508898 32.89369889249625 18.595724252944404 17.095737379470364 33 30.892028698336183 34.78135583261554 16.596866885775473 17.729748583272805 34 25.345196379079066 37.17900955986133 18.95426593341476 18.52152812764484 35 24.42421431491411 39.534220853174176 19.622218582910264 16.419346249001446 36 25.741617463030074 39.10242065640131 16.64731024981654 18.508651630752073 37 25.87638312953881 38.85620453377705 17.44277772291029 17.824634613773853 38 28.937363968561346 36.423421722775274 16.558987482294818 18.080226826368566 39 27.01951601873718 35.12870871238781 17.044481420965187 20.80729384790982 40 27.198411815373536 33.56827731223755 18.558782458460797 20.67452841392812 41 26.488954340942133 32.80700131390274 19.24054921384611 21.463495131309017 42 26.282492839792624 31.24081924523726 20.089335385238535 22.38735252973158 43 27.26879499741845 29.799401680445353 20.59851957790093 22.333283744235267 44 26.53408458733328 29.225584974253255 20.059456911866004 24.18087352654746 45 27.28723464102702 29.55231045609052 20.632461023593994 22.527993879288466 46 26.608718263498133 31.16712317806945 21.04494647502772 21.179212083404696 47 27.160594919159355 29.9099770348303 20.13184032643795 22.7975877195724 48 27.530762951193076 29.386416170879865 20.435125583349066 22.647695294577993 49 27.430251266709753 28.96561725300566 21.167460717308387 22.436670762976195 50 24.79000683829495 29.423545487162883 21.523377092587012 24.26307058195515 51 24.483971261659168 29.94191824799633 21.32672923227325 24.24738125807125 52 25.25399827729974 28.93830157755839 21.4965614752715 24.31113866987037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 58.0 4 116.0 5 82.5 6 49.0 7 75.0 8 101.0 9 983.5 10 1866.0 11 3458.5 12 5051.0 13 4591.5 14 3977.5 15 3823.0 16 4464.5 17 5106.0 18 5912.0 19 6718.0 20 8057.5 21 9397.0 22 11978.5 23 14560.0 24 17741.5 25 20923.0 26 26002.5 27 31082.0 28 36518.0 29 41954.0 30 45995.5 31 50037.0 32 55449.5 33 60862.0 34 66132.5 35 71403.0 36 68802.5 37 66202.0 38 62137.0 39 55078.5 40 52085.0 41 51624.0 42 51163.0 43 49851.5 44 48540.0 45 52898.0 46 57256.0 47 55588.5 48 53921.0 49 56170.0 50 58419.0 51 65753.0 52 73087.0 53 77088.0 54 81089.0 55 92100.0 56 103111.0 57 109811.0 58 116511.0 59 104636.5 60 92762.0 61 93474.5 62 94187.0 63 84769.5 64 66821.0 65 58290.0 66 48143.5 67 37997.0 68 33911.5 69 29826.0 70 26555.5 71 23285.0 72 23973.0 73 24661.0 74 18019.0 75 11377.0 76 7370.5 77 3364.0 78 2219.0 79 1074.0 80 978.0 81 882.0 82 479.0 83 76.0 84 52.5 85 29.0 86 19.5 87 10.0 88 7.5 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1599814.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.610487104296542 #Duplication Level Percentage of deduplicated Percentage of total 1 81.79102376210409 19.311259117823706 2 7.532590158849403 3.556962456149298 3 2.6375623184306143 1.8682239331825354 4 1.2378691713134458 1.1690677642440943 5 0.7351739491789017 0.867890752325161 6 0.4799672618728815 0.6799356508160515 7 0.355511365896829 0.5875657563956552 8 0.3006165368173914 0.5678162292692245 9 0.23593926845535995 0.5013576949736193 >10 3.188607238930548 18.92442551077031 >50 0.9685760933596181 15.777599461071098 >100 0.4938395202710031 22.93025522619328 >500 0.026005520142522148 4.081115028722404 >1k 0.014329572323430574 5.691807791140586 >5k 0.002388262053905095 3.484717626923015 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAA 7742 0.48393125700862727 No Hit ATGCTTGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGAAG 7005 0.43786340162043835 No Hit ATGCTTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 6523 0.40773489918202993 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAA 6480 0.4050470867238316 No Hit ATGCTTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 6370 0.3981712874121616 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5745 0.35910424586858225 No Hit ATGCTTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 5617 0.35110331576045717 No Hit ATGCTTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5106 0.3191621025944266 No Hit ATGCTTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5031 0.31447405760919706 No Hit ATGCTTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 4191 0.2619679537746263 No Hit ATGCTTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 4100 0.2562797925258811 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAA 4090 0.2556547198611839 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAA 3854 0.2409030049743283 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAAA 3768 0.23552738005793175 No Hit ATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3316 0.20727409561361507 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGTAAAAAAAAAAAAAAAAAAA 2398 0.14989242499440558 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGGAAAAAAAAAAAAAAAAAA 2383 0.14895481599735969 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGAAAAAAAAAAAAAAAAAAAAAA 2312 0.14451680007800907 No Hit ATGCTTGGGAGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAAA 2159 0.13495318830814082 No Hit ATGCTTGGGCAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAA 2066 0.1291400125264562 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 1940 0.12126409695127059 No Hit ATGCTTGGGAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAA 1704 0.10651238206441499 No Hit ATGCTTGGGGGGGCTGGAGAGATGGCTCAGTGGTTATGAGCACCGACTGCTC 1689 0.10557477306736907 No Hit ATGCTTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCGGACTGCT 1666 0.10413710593856537 No Hit ATGCTTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 1649 0.10307448240858 No Hit ATGCTTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1642 0.1026369315432919 No Hit ATGCTTGGGGAGTGCAGTGCTATGCTTGGGGGGCAAAAAAAAAAAAAAAAAA 1613 0.10082422081566982 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0013126525958642693 0.0 0.0 0.0 0.0 8 0.0039379577875928076 0.0 0.0 0.0 0.0 9 0.005625653982275439 0.0 0.0 0.0 0.0 10 0.07375857443427798 0.0 0.0 0.0 0.0 11 0.21246219873060243 0.0 0.0 0.0 0.0 12 0.2974720811294313 0.0 0.0 0.0 0.0 13 0.36679263964435865 0.0 0.0 0.0 0.0 14 0.44430165006682026 0.0 0.0 0.0 0.0 15 0.5425005656907615 0.0 0.0 0.0 0.0 16 0.6421996557099763 0.0 0.0 0.0 0.0 17 0.7127078522878285 0.0 0.0 0.0 0.0 18 0.7810908018057099 0.0 0.0 0.0 0.0 19 0.8531616800453052 0.0 0.0 0.0 0.0 20 0.9368589098482699 0.0 0.0 0.0 0.0 21 1.0209936905165224 0.0 0.0 0.0 0.0 22 1.119130098873994 0.0 0.0 0.0 0.0 23 1.2207669141537705 0.0 0.0 0.0 0.0 24 1.3249040200923357 0.0 0.0 0.0 0.0 25 1.424478095578611 0.0 0.0 0.0 0.0 26 1.5246147364631137 0.0 0.0 0.0 0.0 27 1.6184381434341741 0.0 0.0 0.0 0.0 28 1.7314512812114409 0.0 0.0 0.0 0.0 29 1.8046472902474913 0.0 0.0 0.0 0.0 30 1.8776557774841325 0.0 0.0 0.0 0.0 31 1.9277866051928536 0.0 0.0 0.0 0.0 32 1.9796051290962575 0.0 0.0 0.0 0.0 33 2.0332363637272834 0.0 0.0 0.0 0.0 34 2.0904305125470835 0.0 0.0 0.0 0.0 35 2.175065351347094 0.0 0.0 0.0 0.0 36 2.2381351832150487 0.0 0.0 0.0 0.0 37 2.297642100894229 0.0 0.0 0.0 0.0 38 2.3497731611299812 0.0 0.0 0.0 0.0 39 2.406217222752145 0.0 0.0 0.0 0.0 40 2.4655991258983856 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 35 1.01990736E-7 46.000004 20 ACGTTTA 20 6.312199E-4 46.000004 10 CTATAAT 20 6.312199E-4 46.000004 44 ATGTCGC 40 5.6134013E-9 46.000004 38 TCTAGCG 20 6.312199E-4 46.000004 27 CGTTAGT 20 6.312199E-4 46.000004 28 TAATTCG 20 6.312199E-4 46.000004 43 CATCCGA 40 5.6134013E-9 46.000004 31 TTCGAAT 20 6.312199E-4 46.000004 11 TACGTAC 20 6.312199E-4 46.000004 23 TAATCGC 40 5.6134013E-9 46.000004 35 ATGTACG 55 1.8189894E-12 46.0 38 TACGCAC 65 0.0 46.0 16 CGTAATA 25 3.4177603E-5 46.0 24 TCTATCG 25 3.4177603E-5 46.0 42 GCGAAGT 30 1.8618648E-6 45.999996 35 CCGTAAA 30 1.8618648E-6 45.999996 14 TCGGTAT 30 1.8618648E-6 45.999996 36 TGGGATA 1800 0.0 43.444447 6 TTGGGAT 10110 0.0 43.38378 5 >>END_MODULE