##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527513_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 680359 Sequences flagged as poor quality 0 Sequence length 50 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22647308259316 31.0 31.0 33.0 30.0 34.0 2 31.002400203422017 31.0 31.0 34.0 27.0 34.0 3 32.09172804357699 34.0 31.0 34.0 30.0 34.0 4 34.4877307421523 35.0 35.0 37.0 32.0 37.0 5 35.34670225572088 35.0 35.0 37.0 33.0 37.0 6 34.77653562310486 35.0 35.0 37.0 32.0 37.0 7 35.9627549573093 37.0 35.0 37.0 35.0 37.0 8 36.48809084615622 37.0 37.0 37.0 35.0 37.0 9 38.576147298705536 39.0 39.0 39.0 39.0 39.0 10 37.58348313169959 39.0 37.0 39.0 35.0 39.0 11 37.21033601378096 39.0 37.0 39.0 34.0 39.0 12 37.05600278676405 39.0 37.0 39.0 34.0 39.0 13 36.963910229746354 39.0 37.0 39.0 34.0 39.0 14 37.810466239147274 40.0 38.0 40.0 34.0 40.0 15 37.89847565770424 40.0 38.0 40.0 34.0 40.0 16 37.99772914005694 40.0 38.0 40.0 34.0 40.0 17 37.961695222669206 40.0 38.0 40.0 34.0 40.0 18 37.79461284410142 40.0 37.0 40.0 34.0 40.0 19 37.788868817785904 40.0 37.0 40.0 34.0 40.0 20 37.531685477813916 39.0 37.0 40.0 33.0 40.0 21 37.48327721100184 39.0 36.0 40.0 33.0 40.0 22 37.30479937797545 39.0 36.0 40.0 33.0 40.0 23 37.14166491514039 38.0 36.0 40.0 33.0 40.0 24 36.95515161848377 38.0 36.0 40.0 33.0 40.0 25 36.48778806483048 38.0 35.0 40.0 32.0 40.0 26 36.055583890269695 38.0 35.0 39.0 31.0 40.0 27 35.770174275639775 38.0 34.0 39.0 31.0 40.0 28 35.774840929568064 38.0 34.0 39.0 31.0 40.0 29 35.43250107663748 37.0 34.0 39.0 30.0 40.0 30 35.11456598648655 37.0 34.0 38.0 30.0 40.0 31 34.959584572262585 36.0 33.0 38.0 29.0 40.0 32 34.84867400886885 36.0 33.0 38.0 29.0 40.0 33 34.27478581160828 36.0 33.0 38.0 28.0 39.0 34 33.83043510852359 35.0 32.0 38.0 27.0 39.0 35 33.683478869244034 35.0 32.0 38.0 27.0 39.0 36 33.39385824248669 35.0 32.0 38.0 26.0 39.0 37 33.10291478469455 34.0 31.0 38.0 26.0 39.0 38 32.62664563855259 34.0 31.0 37.0 25.0 38.0 39 31.911906802144163 34.0 30.0 36.0 23.0 38.0 40 31.625069999808925 33.0 30.0 36.0 23.0 38.0 41 31.215572954866474 33.0 29.0 36.0 23.0 38.0 42 30.738457196862246 33.0 29.0 35.0 22.0 38.0 43 30.258103442447297 32.0 28.0 35.0 21.0 37.0 44 29.786866933486586 31.0 27.0 34.0 21.0 37.0 45 29.305853233366502 31.0 26.0 34.0 20.0 37.0 46 29.143777035359275 31.0 26.0 34.0 20.0 36.0 47 28.72169398802691 31.0 26.0 34.0 19.0 36.0 48 28.15743600069963 30.0 24.0 33.0 18.0 36.0 49 27.453157818151887 29.0 24.0 33.0 17.0 35.0 50 30.52734365239528 32.0 28.0 35.0 22.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 21.0 13 33.0 14 54.0 15 79.0 16 149.0 17 219.0 18 367.0 19 556.0 20 839.0 21 1135.0 22 1800.0 23 2385.0 24 3326.0 25 4604.0 26 6167.0 27 8509.0 28 11235.0 29 14942.0 30 20100.0 31 27347.0 32 41871.0 33 65768.0 34 92954.0 35 160993.0 36 176416.0 37 37884.0 38 601.0 39 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 100.0 0.0 5 100.0 0.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.67634734015424 0.14580537627928786 0.1412489582705601 0.03659832529590995 8 99.37871035732606 0.3058679314891109 0.2589809203670415 0.05644079081778884 9 98.61029250733804 0.8192733542144661 0.2605977138540094 0.3098364245934867 10 64.96482004353584 22.190049664956295 4.75219700187695 8.092933289630915 11 35.55049613512866 28.323429248382105 19.20001058264828 16.926064033840955 12 37.42362488039403 15.362918694395164 25.0051810882196 22.208275336991207 13 24.40241108003275 15.337049998603677 31.375200445647078 28.885338475716498 14 31.177657677784815 16.227315285018644 28.485255578304987 24.109771458891554 15 26.456620695838524 14.058754275316415 24.920519901992918 34.56410512685215 16 31.026854939818538 20.694221727058803 27.124062443504094 21.15486088961857 17 38.88285449299561 14.868767812287336 21.334618929124183 24.91375876559287 18 29.08170539377005 15.578099209387986 30.493607051571303 24.84658834527066 19 37.32999783937598 16.963397265267307 20.80357575926827 24.90302913608845 20 27.810905713013277 17.200477982947238 25.316487325073965 29.672128978965517 21 32.32646294088856 16.679723498917483 29.07612010717871 21.917693453015247 22 31.600669646466056 15.546792208231242 24.82027870580091 28.032259439501793 23 33.773052168046576 16.828909443396796 28.143818190102575 21.254220198454053 24 39.17431826432809 16.46189732185508 21.62975723110887 22.73402718270795 25 30.03267392655936 16.191304884627087 28.38354456985209 25.392476618961464 26 35.462601361928044 16.493057341785732 22.753869648229834 25.290471648056396 27 30.901773916417657 15.297218086333833 26.283182849054693 27.51782514819382 28 37.90734009544961 18.728053865679737 18.60267887982668 24.761927159043974 29 37.5757504493951 19.642424073173135 19.06449389219515 23.717331585236618 30 35.72804945624296 19.901551974766264 20.40555059902199 23.964847969968798 31 36.67534345838006 20.895439025573264 18.838730728923995 23.590486787122682 32 36.82232468446806 20.47198611321376 20.101005498567666 22.60468370375052 33 34.15373354361447 20.86486693054696 21.29728569769783 23.68411382814073 34 30.219781027369375 22.802520434064956 24.387272013745683 22.590426524819986 35 29.961388031906683 26.24070527471526 22.01543596836376 21.782470725014296 36 30.21419574077803 26.270101519932858 20.614263940066934 22.901438799222177 37 31.515714497787194 25.89074297539975 19.339348784979695 23.254193741833358 38 30.849889543608594 26.198521662828007 19.571726103424812 23.37986269013859 39 31.816732048815403 23.865341679907225 20.8435546527642 23.474371618513167 40 30.18200685226476 23.509647112774285 19.124315251212963 27.184030783747993 41 26.989721602859667 24.83424192227927 20.603240348110337 27.57279612675073 42 26.640641190900688 21.832003398205945 22.34996523894003 29.177390171953338 43 27.314844074966306 20.950850947808437 24.316721025223448 27.417583952001813 44 27.84309460152655 21.55509076825617 23.361343055651503 27.240471574565785 45 29.266754757414837 21.42486540194221 22.29793388490488 27.01044595573807 46 28.00668470616248 23.910170953864064 22.168884368399624 25.914259971573834 47 27.71536791605608 22.61423748344624 22.304254077626666 27.366140522871014 48 28.606956033505842 23.740260656506347 23.283589987050952 24.369193322936862 49 30.396452461127137 22.739024544394944 21.264067940601947 25.60045505387597 50 26.636378735344135 22.875423122204598 22.865428398830616 27.622769743620644 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 2.0 8 2.0 9 14.5 10 27.0 11 61.5 12 96.0 13 172.5 14 249.0 15 370.0 16 491.0 17 501.0 18 511.0 19 543.0 20 575.0 21 842.0 22 1109.0 23 1031.0 24 953.0 25 1190.5 26 1428.0 27 1758.5 28 2089.0 29 2388.0 30 2687.0 31 3466.0 32 4245.0 33 5020.0 34 5795.0 35 6257.5 36 6720.0 37 7874.0 38 9028.0 39 10245.5 40 11463.0 41 11285.5 42 11108.0 43 11719.5 44 12331.0 45 13176.5 46 14022.0 47 15254.5 48 16487.0 49 18354.5 50 20222.0 51 22639.5 52 25057.0 53 28513.5 54 31970.0 55 38089.5 56 44209.0 57 52802.5 58 61396.0 59 66826.0 60 72256.0 61 75414.0 62 78572.0 63 77774.5 64 76977.0 65 67469.5 66 57962.0 67 49259.0 68 40556.0 69 31840.0 70 23124.0 71 19400.5 72 15677.0 73 13692.5 74 11708.0 75 12700.5 76 13693.0 77 8810.0 78 3927.0 79 2554.5 80 1182.0 81 746.0 82 310.0 83 220.5 84 131.0 85 70.5 86 10.0 87 5.0 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 680359.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.893841339645688 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7445836154367 10.107017030714667 2 9.391926201760326 2.609798650418382 3 3.4931448882870684 1.4559960256276465 4 1.674636086662153 0.9306851235891639 5 0.9700829383886256 0.6739089216134423 6 0.6294431279620853 0.5247229771341306 7 0.4898019634394042 0.47636615375118135 8 0.3924763033175355 0.43624027902915957 9 0.3141926201760325 0.392880817333202 >10 6.569482058226134 24.521906816842286 >50 2.1919431279620856 20.932478294547437 >100 1.080103249830738 28.451743858756924 >500 0.03914184157075152 3.5550349153902574 >1k 0.017984089370345294 4.127967734681249 >5k 0.0010578876100203114 0.803252400570875 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 5465 0.803252400570875 No Hit CTGTGTGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3265 0.4798937031772932 No Hit CTGTGTGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 3039 0.446675946081407 No Hit CTGTGTGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 2881 0.4234529123595043 No Hit CTGTGTGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 2456 0.3609858912721078 No Hit CTGTGTGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 1939 0.2849965973846161 No Hit CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 1447 0.21268183414932412 No Hit CTGTGTGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1437 0.21121202188844418 No Hit CTGTGTGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 1412 0.20753749123624438 No Hit CTGTGTGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 1367 0.20092333606228477 No Hit CTGTGTGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGA 1325 0.19475012456658913 No Hit CTGTGTGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1220 0.17931709582734998 No Hit CTGTGTGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 1153 0.1694693536794545 No Hit CTGTGTGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1046 0.1537423624880394 No Hit CTGTGTGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 1045 0.1535953812619514 No Hit CTGTGTGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 1030 0.15139066287063152 No Hit CTGTGTGGGAGACCGACCCTCGGCTCCGGAGCGGCAGTGCCGTCCCTCTC 1013 0.14889198202713566 No Hit CTGTGTGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGC 1010 0.1484510383488717 No Hit CTGTGTGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1000 0.14698122608799177 No Hit CTGTGTGGGGAGTGCAGTGCTCTGTGTGGGGAAAAAAAAAAAAAAAAAAA 973 0.14301273298361603 No Hit CTGTGTGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGC 873 0.1283146103748168 No Hit CTGTGTGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 845 0.12419913604435305 No Hit CTGTGTGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 824 0.12111253029650523 No Hit CTGTGTGGGGGAGTGGCCTTGTTCTCGATACTTCGTTGTGGTTGTGAACT 807 0.11861384945300937 No Hit CTGTGTGGGGAGTGCAGTGCTCTGTGTGGGGAGTGCAGTGCTCTGTGTGG 776 0.11405743144428163 No Hit CTGTGTGGGGCTCAGCCCGTAGCCCGTCGGTTCCGGAGTAAGTTCCAGGT 774 0.11376346899210565 No Hit CTGTGTGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 766 0.11258761918340171 No Hit CTGTGTGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCG 751 0.11038290079208182 No Hit CTGTGTGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 730 0.107296295044234 No Hit CTGTGTGGGGAGTGCAGTGCTCTGTGTGGGAAAAAAAAAAAAAAAAAAAA 722 0.10612044523553006 No Hit CTGTGTGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 714 0.10494459542682615 No Hit CTGTGTGGGACCTCTGAAGACATTTAAGAGGTTCTCCTGCCCCCGGGCGT 697 0.10244591458333029 No Hit CTGTGTGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 686 0.10082912109636237 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 1.4698122608799177E-4 0.0 0.0 0.0 0.0 8 0.0014698122608799177 0.0 0.0 0.0 0.0 9 0.0024986808434958605 0.0 0.0 0.0 0.0 10 0.019254540617526923 0.0 0.0 0.0 0.0 11 0.06525966438306835 0.0 0.0 0.0 0.0 12 0.07775306860054765 0.0 0.0 0.0 0.0 13 0.08907062300932302 0.0 0.0 0.0 0.0 14 0.10229893335724229 0.0 0.0 0.0 0.0 15 0.11376346899210564 0.0 0.0 0.0 0.0 16 0.1341938594183365 0.0 0.0 0.0 0.0 17 0.1447765076966719 0.0 0.0 0.0 0.0 18 0.1537423624880394 0.0 0.0 0.0 0.0 19 0.16403104831419882 0.0 0.0 0.0 0.0 20 0.1732908655577423 0.0 0.0 0.0 0.0 21 0.18549030732304564 0.0 0.0 0.0 0.0 22 0.19548503069702908 0.0 0.0 0.0 0.0 23 0.20636164142754046 0.0 0.0 0.0 0.0 24 0.21944297054937173 0.0 0.0 0.0 0.0 25 0.23281826212337897 0.0 0.0 0.0 0.0 26 0.250456009253938 0.0 0.0 0.0 0.0 27 0.269122624967113 0.0 0.0 0.0 0.0 28 0.2920516962368397 0.0 0.0 0.0 0.0 29 0.31174718053263056 0.0 0.0 0.0 0.0 30 0.33511719548062124 0.0 0.0 0.0 0.0 31 0.3605449475938438 0.0 0.0 0.0 0.0 32 0.38861836177665027 0.0 0.0 0.0 0.0 33 0.4131642265333449 0.0 0.0 0.0 0.0 34 0.4431483966552952 0.0 0.0 0.0 0.0 35 0.48033464685555716 0.0 0.0 0.0 0.0 36 0.5117886292383874 0.0 0.0 0.0 0.0 37 0.5432426116212177 0.0 0.0 0.0 0.0 38 0.5763133874910158 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATTG 40 8.303687E-9 44.000004 39 TAATATC 40 8.303687E-9 44.000004 39 ACTATAC 40 8.303687E-9 44.000004 41 ACCGGTA 20 7.854213E-4 44.000004 13 TAGGTCG 20 7.854213E-4 44.000004 36 GACCGTT 40 8.303687E-9 44.000004 43 GAATCGA 20 7.854213E-4 44.000004 39 TGTATTC 20 7.854213E-4 44.000004 26 ATATCCA 20 7.854213E-4 44.000004 42 TAACCAC 20 7.854213E-4 44.000004 31 GTTAACC 20 7.854213E-4 44.000004 35 CAAGGCG 20 7.854213E-4 44.000004 37 TTGACCG 20 7.854213E-4 44.000004 12 CGGTGAT 20 7.854213E-4 44.000004 17 CGTACCA 20 7.854213E-4 44.000004 43 TTAGTTA 20 7.854213E-4 44.000004 17 ACGTCCC 20 7.854213E-4 44.000004 19 CTACATG 20 7.854213E-4 44.000004 42 TTACGTC 20 7.854213E-4 44.000004 17 CGTAACT 20 7.854213E-4 44.000004 41 >>END_MODULE