##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527510_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 970128 Sequences flagged as poor quality 0 Sequence length 50 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.8105394339716 31.0 31.0 33.0 28.0 34.0 2 31.550519106757047 31.0 31.0 34.0 28.0 34.0 3 32.481560165256546 34.0 31.0 34.0 31.0 34.0 4 35.927537397126976 37.0 35.0 37.0 35.0 37.0 5 35.95100337275081 37.0 35.0 37.0 35.0 37.0 6 33.13385037850676 35.0 32.0 35.0 28.0 37.0 7 35.42456768591361 35.0 35.0 37.0 35.0 37.0 8 36.27799424405852 37.0 35.0 37.0 35.0 37.0 9 38.49231957020105 39.0 39.0 39.0 37.0 39.0 10 37.35653851862847 39.0 37.0 39.0 34.0 39.0 11 36.94995814985239 39.0 37.0 39.0 34.0 39.0 12 36.64720119406924 38.0 35.0 39.0 33.0 39.0 13 36.67180310227104 39.0 35.0 39.0 33.0 39.0 14 37.41175700526116 39.0 37.0 40.0 33.0 40.0 15 37.50727532861643 40.0 37.0 40.0 33.0 40.0 16 37.70069207362327 40.0 37.0 40.0 33.0 40.0 17 37.60949689113189 40.0 37.0 40.0 33.0 40.0 18 37.44958191084063 39.0 36.0 40.0 33.0 40.0 19 37.35123406395857 39.0 36.0 40.0 33.0 40.0 20 37.14741559876635 39.0 36.0 40.0 33.0 40.0 21 37.035758167994324 38.0 35.0 40.0 33.0 40.0 22 36.82742586545281 38.0 35.0 40.0 32.0 40.0 23 36.593760823314035 38.0 35.0 40.0 32.0 40.0 24 36.42454397770191 38.0 35.0 40.0 31.0 40.0 25 36.17464808767503 38.0 35.0 40.0 31.0 40.0 26 35.55625237082117 38.0 34.0 39.0 30.0 40.0 27 35.3970723450926 37.0 34.0 39.0 30.0 40.0 28 35.18012262299408 37.0 34.0 38.0 30.0 40.0 29 34.84691710784556 36.0 33.0 38.0 29.0 40.0 30 34.47827503174839 36.0 33.0 38.0 28.0 40.0 31 34.26398269094388 36.0 33.0 38.0 28.0 39.0 32 34.12511132551581 35.0 33.0 38.0 28.0 39.0 33 33.58793272640311 35.0 32.0 38.0 27.0 39.0 34 33.02951156960731 34.0 31.0 37.0 26.0 39.0 35 32.80766661718866 34.0 31.0 37.0 25.0 38.0 36 32.398431959494005 34.0 31.0 36.0 24.0 38.0 37 32.128311934095294 34.0 30.0 36.0 24.0 38.0 38 31.630553906288654 33.0 30.0 36.0 23.0 38.0 39 30.77103227615325 33.0 29.0 35.0 22.0 38.0 40 30.34104571767849 32.0 28.0 35.0 21.0 37.0 41 29.89456339781967 32.0 27.0 34.0 21.0 37.0 42 29.56692209687794 31.0 27.0 34.0 20.0 36.0 43 29.084921783517228 31.0 26.0 34.0 20.0 36.0 44 28.595564708986856 30.0 26.0 33.0 18.0 36.0 45 28.143669701317766 30.0 25.0 33.0 18.0 35.0 46 27.937458768327478 30.0 24.0 33.0 18.0 35.0 47 27.43560437385582 29.0 24.0 32.0 18.0 34.0 48 26.901762447841936 29.0 23.0 32.0 17.0 34.0 49 26.312575247802354 28.0 23.0 31.0 15.0 34.0 50 29.724278651889236 31.0 27.0 34.0 22.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 7.0 12 16.0 13 48.0 14 94.0 15 134.0 16 247.0 17 406.0 18 657.0 19 1040.0 20 1583.0 21 2252.0 22 3218.0 23 4597.0 24 6448.0 25 8580.0 26 11451.0 27 15015.0 28 20736.0 29 27971.0 30 37602.0 31 51239.0 32 77647.0 33 114960.0 34 159740.0 35 234821.0 36 168998.0 37 20258.0 38 357.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 100.0 0.0 0.0 0.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 100.0 0.0 0.0 0.0 6 0.0 100.0 0.0 0.0 7 99.3120495439777 0.513025085349562 0.09916217241436182 0.07576319825837415 8 98.8454100902149 0.8914287599162173 0.14307390364982764 0.12008724621905562 9 98.07685171441294 1.1095443075552915 0.38139297082446855 0.4322110072072964 10 69.50072567743638 20.8324056207016 3.4846948031599956 6.182173898702027 11 37.29002770768394 26.806771889894943 17.597574753022283 18.305625649398845 12 32.90462701829037 17.392859498952713 25.789895766331867 23.91261771642505 13 26.796567050945853 16.89746095360612 27.729433641746244 28.576538353701782 14 25.95379166460508 17.454707007735063 29.99686639288836 26.594634934771495 15 27.38545841373509 17.06537693995019 28.239160193294083 27.310004453020632 16 31.766117460788678 17.426875628783005 24.11083898207247 26.696167928355845 17 33.741423812115514 18.463027559249916 20.78736001847179 27.00818861016278 18 31.860744149225667 18.92296686622796 22.32344597826266 26.892843006283705 19 32.98008097900483 19.39238945788597 21.22338495538733 26.404144607721868 20 30.548649250408193 21.57395725100193 21.841447726485576 26.035945772104302 21 33.4247645671499 19.061402206719112 22.724527072716178 24.78930615341481 22 31.951350749591807 18.955952204245214 23.30816139725892 25.78453564890406 23 31.524706018174918 18.75474164233998 22.618973991060972 27.101578348424127 24 31.075590025233783 19.328171127933633 22.174084244553296 27.422154602279285 25 30.37805320535022 19.733169231276698 22.01132221727442 27.87745534609866 26 28.7826967163096 19.0689269869543 21.802071479227482 30.346304817508617 27 28.487890257780418 18.88895073639767 23.960240298187454 28.662918707634454 28 30.742025794534328 19.155307340886978 20.88353289462834 29.219133969950356 29 31.124964953078354 20.635318226048522 20.610991539260798 27.628725281612322 30 31.028688997740506 19.451556907954416 22.572072963567695 26.94768113073739 31 32.00866277439678 19.205816139725894 21.940609898899936 26.844911186977388 32 32.93307687233025 20.18836689591477 21.401505780680488 25.477050451074497 33 35.24493675061435 19.898611317269474 20.454105025316245 24.402346906799927 34 31.14238533471872 21.49726634011182 23.772017713126516 23.588330612042945 35 32.46757128956179 23.147254795243512 22.883269011924202 21.501904903270496 36 31.70323916019329 22.818535286065345 21.0169173552356 24.461308198505762 37 30.468350568172447 23.72439513136411 20.107449738591196 25.69980456187225 38 33.13686441376808 21.764447578051556 20.52883743176158 24.56985057641878 39 31.739316873649663 22.183876766777168 20.059414840103575 26.017391519469594 40 31.775188428743423 20.754477759635844 20.422356637474643 27.047977174146094 41 28.3082232447677 21.200604456319166 22.55052941467518 27.940642884237953 42 27.77386076888823 20.28495208879653 22.68525390463939 29.25593323767585 43 27.781385549123417 18.818856893111015 25.161525077103224 28.238232480662344 44 28.604678970197746 18.46704764732077 24.285970511107813 28.642302871373676 45 28.97329012254053 19.715955007998947 23.308367555621526 28.002387313839 46 28.930409183118105 21.358212524532846 21.947619283228605 27.76375900912045 47 27.862715023172203 21.171845364735375 23.978176075734336 26.987263536358093 48 29.885437797898835 20.51801411772467 24.35080731614797 25.245740768228526 49 29.214392327610376 20.432664555605033 22.741638216812625 27.611304899971962 50 28.11494977982287 20.942184948790263 23.150141012320024 27.79272425906684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 10.0 10 20.0 11 24.0 12 28.0 13 32.5 14 37.0 15 89.5 16 142.0 17 415.0 18 688.0 19 679.5 20 671.0 21 877.5 22 1084.0 23 1182.5 24 1281.0 25 1308.0 26 1335.0 27 1440.5 28 1546.0 29 1434.0 30 1322.0 31 1759.5 32 2197.0 33 2387.5 34 2578.0 35 3929.5 36 5281.0 37 5234.5 38 5188.0 39 7437.0 40 9686.0 41 9017.0 42 8348.0 43 10647.0 44 12946.0 45 13965.0 46 14984.0 47 16480.5 48 17977.0 49 18958.5 50 19940.0 51 22915.5 52 25891.0 53 28813.0 54 31735.0 55 35011.5 56 38288.0 57 41590.5 58 44893.0 59 51592.5 60 58292.0 61 73711.0 62 89130.0 63 95694.5 64 102259.0 65 104484.0 66 106709.0 67 103979.0 68 101249.0 69 93137.5 70 85026.0 71 73079.0 72 61132.0 73 51916.0 74 42700.0 75 36648.5 76 30597.0 77 25396.0 78 20195.0 79 16996.0 80 13797.0 81 10877.5 82 7958.0 83 5144.0 84 2330.0 85 1420.5 86 511.0 87 309.0 88 107.0 89 70.5 90 34.0 91 22.5 92 11.0 93 7.5 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 970128.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.77648374076656 #Duplication Level Percentage of deduplicated Percentage of total 1 72.06365216121657 8.48656427976824 2 9.691791524844644 2.2827045062246425 3 3.499213088503324 1.236252781267108 4 1.525233086654116 0.7184753058344557 5 0.864394805163317 0.5089765684304441 6 0.4969153451349197 0.3511149289511272 7 0.3612274403581753 0.2977792354667742 8 0.32686600088390355 0.30794657158549427 9 0.23964290562306992 0.25399357034941245 >10 6.803391106238438 22.540578879371807 >50 2.707436008798559 21.95342629882675 >100 1.335656683806904 29.961589814821725 >500 0.05902968193605711 4.724300809424346 >1k 0.024669120809098492 5.668891206916258 >5k 8.810400288963746E-4 0.7074052427614079 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGCGAGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 6818 0.7027938581300612 No Hit GGGCGAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 4759 0.4905538238253096 No Hit GGGCGAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4544 0.4683917998449689 No Hit GGGCGAGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 3799 0.3915978097735556 No Hit GGGCGAGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3583 0.369332706611911 No Hit GGGCGAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 3277 0.33779047713291444 No Hit GGGCGAGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 2943 0.30336203057740835 No Hit GGGCGAGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 2478 0.25543021127109 No Hit GGGCGAGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2378 0.24512229314069897 No Hit GGGCGAGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 2204 0.22718651559381856 No Hit GGGCGAGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 1872 0.19296422740092029 No Hit GGGCGAGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1870 0.19275806903831247 No Hit GGGCGAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 1711 0.17636847921099072 No Hit GGGCGAGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTT 1624 0.1674005904375505 No Hit GGGCGAGGGGGTTTTTTCGGCTCCTCGGGTTTGTGTCTGCAGGTGCCATC 1420 0.1463724374515528 No Hit GGGCGAGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1318 0.13585836095855391 No Hit GGGCGAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1273 0.13121979779987797 No Hit GGGCGAGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCGG 1269 0.1308074810746623 No Hit GGGCGAGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTCT 1227 0.12647815545989807 No Hit GGGCGAGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 1194 0.12307654247686903 No Hit GGGCGAGGGGAGAGCGCGGGACGTCTGTCTTCGAGTCCGAACGTTCGTGG 1189 0.12256114657034949 No Hit GGGCGAGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGC 1168 0.12039648376296735 No Hit GGGCGAGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 1146 0.11812874177428133 No Hit GGGCGAGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGAC 1139 0.11740718750515396 No Hit GGGCGAGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 1114 0.1148302079725562 No Hit GGGCGAGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1059 0.10916085300084113 No Hit GGGCGAGGGGCTCTTTTTCGTGACGCCTCCCAGGCGCTCGGCTGTGTCAA 1047 0.1079239028251942 No Hit GGGCGAGGGGCCTCTCCTTCCTGCGGCGCCTTAGGGACCATGGCCGATCC 1022 0.10534692329259643 No Hit GGGCGAGGGGGGCGGACCGCGCTGCTGGAGGTGTGAGGAGCTTAGACTCG 1010 0.10410997311694951 No Hit GGGCGAGGGGAGCATTCGCAGACTGCAGCTCCCAGACACCGCCCGCATCC 992 0.10225454785347914 No Hit GGGCGAGGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCG 983 0.10132683522174393 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.1624527897349628 0.0 0.0 0.0 0.0 7 0.16317434400409017 0.0 0.0 0.0 0.0 8 0.16368973991060973 0.0 0.0 0.0 0.0 9 0.1643082149984332 0.0 0.0 0.0 0.0 10 0.17605924166707898 0.0 0.0 0.0 0.0 11 0.20110748272392923 0.0 0.0 0.0 0.0 12 0.21337390529909456 0.0 0.0 0.0 0.0 13 0.22213563570992695 0.0 0.0 0.0 0.0 14 0.23316510810944535 0.0 0.0 0.0 0.0 15 0.24285455115201293 0.0 0.0 0.0 0.0 16 0.25099780647502185 0.0 0.0 0.0 0.0 17 0.2584195075289034 0.0 0.0 0.0 0.0 18 0.268108950571471 0.0 0.0 0.0 0.0 19 0.2755306516253525 0.0 0.0 0.0 0.0 20 0.2856324113931358 0.0 0.0 0.0 0.0 21 0.2918171622713704 0.0 0.0 0.0 0.0 22 0.2981049923309089 0.0 0.0 0.0 0.0 23 0.30264047630828095 0.0 0.0 0.0 0.0 24 0.3116083650817212 0.0 0.0 0.0 0.0 25 0.3200608579486418 0.0 0.0 0.0 0.0 26 0.32810103409034685 0.0 0.0 0.0 0.0 27 0.33490426005640495 0.0 0.0 0.0 0.0 28 0.34624296999983506 0.0 0.0 0.0 0.0 29 0.35211848333415796 0.0 0.0 0.0 0.0 30 0.36211716392063725 0.0 0.0 0.0 0.0 31 0.36933270661191103 0.0 0.0 0.0 0.0 32 0.3781975162040473 0.0 0.0 0.0 0.0 33 0.38489766298880146 0.0 0.0 0.0 0.0 34 0.392319364042683 0.0 0.0 0.0 0.0 35 0.4058227367934953 0.0 0.0 0.0 0.0 36 0.419944584632131 0.0 0.0 0.0 0.0 37 0.42922171094948297 0.0 0.0 0.0 0.0 38 0.4390142331733544 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGAC 65 0.0 44.000004 9 CGAACAA 70 0.0 44.0 44 CGAAATT 50 2.7284841E-11 44.0 20 CATGCCG 20 7.8558736E-4 44.0 23 GCGGTAT 20 7.8558736E-4 44.0 21 TAGACCT 25 4.4423254E-5 44.0 19 GTTTACG 25 4.4423254E-5 44.0 11 CGGTTAT 20 7.8558736E-4 44.0 19 CGCATAT 30 2.5273075E-6 44.0 37 TAACGGT 25 4.4423254E-5 44.0 40 ATATCGC 25 4.4423254E-5 44.0 29 ATATCGA 20 7.8558736E-4 44.0 24 ACGTGCA 35 1.4457692E-7 44.0 21 GTCGTAA 40 8.310963E-9 44.0 12 CAAATGC 20 7.8558736E-4 44.0 43 CGTACTT 35 1.4457692E-7 44.0 16 TCGTATT 20 7.8558736E-4 44.0 22 CGTGTAA 20 7.8558736E-4 44.0 25 TTAGTAC 40 8.310963E-9 44.0 23 GTATACC 25 4.4423254E-5 44.0 17 >>END_MODULE