##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527504_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 645422 Sequences flagged as poor quality 0 Sequence length 50 %GC 63 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.521054441900027 31.0 31.0 33.0 30.0 34.0 2 31.637094799991324 31.0 31.0 34.0 30.0 34.0 3 32.54178661402927 34.0 31.0 34.0 31.0 34.0 4 36.21812085736154 37.0 37.0 37.0 35.0 37.0 5 35.076867537827965 35.0 35.0 37.0 33.0 37.0 6 35.732031136217856 37.0 35.0 37.0 35.0 37.0 7 36.424461824976525 37.0 37.0 37.0 35.0 37.0 8 36.57608045588778 37.0 37.0 37.0 35.0 37.0 9 38.50296085351909 39.0 39.0 39.0 37.0 39.0 10 36.98454034724568 39.0 37.0 39.0 32.0 39.0 11 35.37224172711807 37.0 35.0 39.0 31.0 39.0 12 35.24464768786933 37.0 35.0 39.0 30.0 39.0 13 35.465317265293095 37.0 35.0 39.0 30.0 39.0 14 36.36999978308766 38.0 35.0 40.0 31.0 40.0 15 36.626538915624195 38.0 35.0 40.0 32.0 40.0 16 36.803299236778415 38.0 35.0 40.0 33.0 40.0 17 36.7442820356294 38.0 35.0 40.0 33.0 40.0 18 36.59748815503655 38.0 35.0 40.0 32.0 40.0 19 36.492403419778064 38.0 35.0 40.0 32.0 40.0 20 36.34221486097468 38.0 35.0 40.0 31.0 40.0 21 36.20684296475794 38.0 35.0 40.0 31.0 40.0 22 35.97501014839903 38.0 34.0 40.0 31.0 40.0 23 35.64832931012578 37.0 34.0 40.0 30.0 40.0 24 35.50615566249679 37.0 34.0 39.0 30.0 40.0 25 35.32844247639529 37.0 34.0 39.0 30.0 40.0 26 34.71391740597625 36.0 33.0 39.0 28.0 40.0 27 34.5642385911853 36.0 33.0 38.0 28.0 40.0 28 34.33327962170487 35.0 33.0 38.0 27.0 40.0 29 34.04195394641025 35.0 33.0 38.0 27.0 40.0 30 33.72608773794509 35.0 32.0 38.0 26.0 39.0 31 33.549387842372894 35.0 32.0 38.0 26.0 39.0 32 33.47689418705901 35.0 32.0 38.0 26.0 39.0 33 32.93298338141557 34.0 31.0 37.0 24.0 39.0 34 32.45115443849141 34.0 31.0 37.0 23.0 38.0 35 32.20929407426459 34.0 31.0 36.0 23.0 38.0 36 31.865300532054995 33.0 30.0 36.0 23.0 38.0 37 31.63786948694033 33.0 30.0 36.0 23.0 38.0 38 31.117104777959227 33.0 29.0 35.0 21.0 38.0 39 30.239892659376345 32.0 28.0 35.0 20.0 38.0 40 30.021179941185768 32.0 27.0 34.0 20.0 37.0 41 29.577443904918024 32.0 27.0 34.0 19.0 37.0 42 29.27692579428653 31.0 26.0 34.0 18.0 37.0 43 28.753454329105608 31.0 26.0 34.0 18.0 36.0 44 28.307541422511164 30.0 25.0 33.0 18.0 36.0 45 27.955650721543424 30.0 24.0 33.0 18.0 35.0 46 27.792232059024947 30.0 24.0 33.0 18.0 35.0 47 27.249771467350044 29.0 23.0 32.0 18.0 34.0 48 26.74917650777321 29.0 23.0 32.0 16.0 34.0 49 25.983965529529517 28.0 23.0 31.0 14.0 34.0 50 29.495396810149018 31.0 27.0 34.0 20.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 6.0 13 9.0 14 35.0 15 78.0 16 133.0 17 269.0 18 476.0 19 823.0 20 1297.0 21 2011.0 22 2936.0 23 4133.0 24 5771.0 25 7456.0 26 9916.0 27 12959.0 28 17785.0 29 23257.0 30 31550.0 31 46881.0 32 69396.0 33 78292.0 34 87303.0 35 126035.0 36 101608.0 37 14715.0 38 289.0 39 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 100.0 0.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 100.0 0.0 0.0 0.0 7 98.78374149006387 1.0013603502824509 0.07979275574740248 0.13510540390628148 8 98.88429585604457 0.6797103290560285 0.30119828577271923 0.1347955291266799 9 97.05649946856475 1.2562323565047364 0.8272107241463724 0.8600574507841382 10 65.49187973140053 22.723737337741817 5.196135241748809 6.588247689108831 11 36.73240143657948 25.08420847135672 17.61932503075507 20.564065061308725 12 29.293392540074553 16.359219239505315 28.905584253403198 25.44180396701693 13 23.861132716269356 15.873955334649267 29.100805364552183 31.164106584529193 14 25.679322985581525 16.198549166281907 30.43837985070233 27.68374799743424 15 26.24252039750737 17.41852617357326 26.720347307652975 29.618606121266396 16 30.313035502353497 17.65418594346025 24.198586351255457 27.834192202930797 17 32.12409865173483 18.94125084053534 22.052858439904437 26.881792067825394 18 31.00870438255901 18.977971001918124 22.306645884398115 27.70667873112475 19 30.40770224752178 18.12860423103024 22.08756441521981 29.37612910622817 20 32.097604358078904 19.420782061968758 22.45213209342105 26.029481486531292 21 34.469076046369665 16.240692136307718 23.115419059158192 26.17481275816442 22 33.51605616170505 17.368791271447208 22.877745103203793 26.23740746364394 23 31.3439888940879 18.838837225877022 22.36459246818361 27.452581411851472 24 30.159492549060925 19.63103209992842 21.928908528063808 28.280566822946845 25 29.395806154732874 20.159833411318488 21.63762623523834 28.8067341987103 26 29.90833904019386 19.22075789173595 21.532888559733014 29.338014508337178 27 31.17417751486624 18.121322173709604 21.858412015704452 28.846088295719703 28 32.92450520744567 19.01871953543573 20.49759692108419 27.559178336034407 29 31.044339982213188 19.330298626325103 21.429235445956287 28.196125945505422 30 30.4517044662252 19.14778238113978 20.9160828109361 29.484430341698918 31 31.96885138715445 20.093985020653154 19.853987003851746 28.083176588340653 32 34.89468905615241 19.447896105183897 19.83152108233063 25.82589375633307 33 34.35023906839246 19.23919544112224 20.81088032326137 25.599685167223925 34 31.819026931217092 21.313342278385306 22.59947755112159 24.268153239276007 35 32.39740820734342 22.23769874593677 22.460498712470294 22.90439433424953 36 31.71506394266077 22.25071348668003 20.788104526960655 25.24611804369854 37 31.546956874726924 22.814530648165075 20.11087319614144 25.527639280966564 38 33.681839168791896 21.440236000632147 20.24380947659051 24.634115353985457 39 32.506329192373364 19.79387129660904 20.960859716588526 26.738939794429072 40 31.45074075566064 21.69355863295642 20.13876192630558 26.716938685077363 41 29.850702331187968 20.04827849066192 22.496908999073476 27.604110179076635 42 29.53401030643517 18.367362748713244 22.854039682564277 29.244587262287308 43 28.661557864466968 18.038895482335587 24.829646339914042 28.469900313283404 44 27.234119692232365 18.262934947987517 25.145873552497434 29.357071807282676 45 27.9541137426366 18.962787137717648 24.34314293593959 28.739956183706166 46 29.767346015475148 18.975337066291512 22.47227395409515 28.785042964138192 47 29.31988683373049 20.474976062173276 23.91117749317501 26.293959610921224 48 30.895290213224836 20.329025040980937 22.859462491207303 25.916222254586923 49 28.94106491566758 20.60853209218155 23.533750011620306 26.91665298053057 50 27.796077605039805 20.85441772979539 23.66761591640818 27.681888748756627 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.5 10 1.0 11 2.0 12 3.0 13 2.5 14 2.0 15 44.0 16 86.0 17 128.5 18 171.0 19 317.5 20 464.0 21 468.5 22 473.0 23 502.0 24 531.0 25 523.5 26 516.0 27 652.0 28 788.0 29 906.5 30 1025.0 31 1294.5 32 1564.0 33 1900.0 34 2236.0 35 2409.0 36 2582.0 37 2982.5 38 3383.0 39 4586.5 40 5790.0 41 5933.0 42 6076.0 43 6166.0 44 6256.0 45 8643.0 46 11030.0 47 10862.0 48 10694.0 49 11298.0 50 11902.0 51 14220.5 52 16539.0 53 19381.5 54 22224.0 55 24968.0 56 27712.0 57 29767.0 58 31822.0 59 36080.5 60 40339.0 61 49274.0 62 58209.0 63 60151.0 64 62093.0 65 64456.0 66 66819.0 67 64441.5 68 62064.0 69 60966.5 70 59869.0 71 50297.5 72 40726.0 73 34932.5 74 29139.0 75 24770.0 76 20401.0 77 17963.0 78 15525.0 79 16637.0 80 17749.0 81 11890.0 82 6031.0 83 3779.0 84 1527.0 85 1183.5 86 840.0 87 508.0 88 176.0 89 105.5 90 35.0 91 21.5 92 8.0 93 5.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 645422.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.967020027207004 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43712660708312 9.522606914545833 2 9.452516369545476 2.4514193814279652 3 3.321703388615399 1.2921778309385177 4 1.525832815561822 0.7914201871023919 5 0.8602972805047078 0.5577746032828134 6 0.5412703723175453 0.42111982547852417 7 0.3524829135401233 0.3199457099386138 8 0.2843760455001673 0.295000790180688 9 0.24375089614300052 0.28446504767423486 >10 5.963532954165272 22.158215864968966 >50 2.798355876308369 24.90711503481443 >100 1.1446733260048751 27.546628407460545 >500 0.052573722697509914 4.572047435631261 >1k 0.021507432012617695 4.880062966555215 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGGCAGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 3711 0.5749726535507002 No Hit CGGCAGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 3189 0.49409533607469225 No Hit CGGCAGGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3139 0.4863484665846531 No Hit CGGCAGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 2328 0.3606942434562193 No Hit CGGCAGGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTG 2012 0.3117340282791724 No Hit CGGCAGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1877 0.2908174806560669 No Hit CGGCAGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 1818 0.2816761746578208 No Hit CGGCAGGGGAGTCCGGAGTAGGCGAGCGAGCGAGGCAGAGGTTTTTGGTC 1425 0.22078578046611363 No Hit CGGCAGGGGGGCTCTCTGCTCCTCCCTGTTCCAGAGACGGCCGCATCTTC 1362 0.21102472490866442 No Hit CGGCAGGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTA 1325 0.2052920414860355 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1255 0.1944464241999808 No Hit CGGCAGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 1243 0.1925871755223714 No Hit CGGCAGGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCG 1216 0.18840386599775033 No Hit CGGCAGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTT 1194 0.1849952434221331 No Hit CGGCAGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 1137 0.17616381220348856 No Hit CGGCAGGGGGGCCTCATTGCGTTACTTACCTCGACTCTTAGTTGTCGGGA 1111 0.17213544006866824 No Hit CGGCAGGGGATTCCCAATATTCTTTAGATGAAAAGATGCGTAGCCACATG 1090 0.16888175488285184 No Hit CGGCAGGGGGAGTGCGAGATCCGCTGCTGCCGAGGAGAGGAGCGTCAACT 1065 0.1650083201378323 No Hit CGGCAGGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 981 0.15199357939456667 No Hit CGGCAGGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCG 968 0.14997939332715648 No Hit CGGCAGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 958 0.14843001942914869 No Hit CGGCAGGGGGCACTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCT 938 0.14533127163313303 No Hit CGGCAGGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCC 851 0.13185171872046506 No Hit CGGCAGGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTC 850 0.1316967813306643 No Hit CGGCAGGGGGTCTGTTTGCTGCTTTAGGTGTCTCTTTTCCTCCCTCTCTA 844 0.1307671569918596 No Hit CGGCAGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 802 0.12425978662022677 No Hit CGGCAGGGGGGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 771 0.11945672753640253 No Hit CGGCAGGGGGGGCCATCTTGACTCCCTGACCTTGGACTGGTCCTCGTCCG 768 0.11899191536700018 No Hit CGGCAGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCC 755 0.11697772929959005 No Hit CGGCAGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 751 0.11635797974038692 No Hit CGGCAGGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 745 0.11542835540158222 No Hit CGGCAGGGGGACTGGCTGCTCCGAAAAGCCATCTTTGCATTGTTCCTGGG 729 0.11294935716476971 No Hit CGGCAGGGGGCTCTTTCTAAGCCGGCGATCCGTCAGGGTGAAGCCATGTT 706 0.10938579719935175 No Hit CGGCAGGGGGAGAGCAGCGCCTTGGAGGTCCCGTGGATCTGTGTCTTGCT 701 0.10861111025034784 No Hit CGGCAGGGGAAGCAAGGAGGCCCGTGAGGAGGGATGAAGAACAAGAACAA 698 0.1081462980809455 No Hit CGGCAGGGGGAGTTGCTTCAGTGTCCTGGTGCGGAGCGTCACGTCTCGTG 692 0.1072166737421408 No Hit CGGCAGGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGT 656 0.10163892770931265 No Hit CGGCAGGGGGATCGTGGTGTGCCCAGCTCTTCCAAGGACTGCTGCGCTTC 651 0.10086424076030877 No Hit CGGCAGGGGGGCCCCCTCTCCTCTCTGTTCCAGTGACCTGTGTTCCCTCG 647 0.10024449120110564 No Hit CGGCAGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTT 646 0.10008955381130485 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.1047376755053283 0.0 0.0 0.0 0.0 6 0.1047376755053283 0.0 0.0 0.0 0.0 7 0.10535742506453143 0.0 0.0 0.0 0.0 8 0.10597717462373454 0.0 0.0 0.0 0.0 9 0.10644198679313689 0.0 0.0 0.0 0.0 10 0.11821722841799628 0.0 0.0 0.0 0.0 11 0.13464059173687912 0.0 0.0 0.0 0.0 12 0.1450213968535315 0.0 0.0 0.0 0.0 13 0.1540077654619768 0.0 0.0 0.0 0.0 14 0.16361388362962526 0.0 0.0 0.0 0.0 15 0.17492431308508233 0.0 0.0 0.0 0.0 16 0.18484030603233234 0.0 0.0 0.0 0.0 17 0.19305198769177376 0.0 0.0 0.0 0.0 18 0.20157354413081674 0.0 0.0 0.0 0.0 19 0.21055991273926206 0.0 0.0 0.0 0.0 20 0.217687032670098 0.0 0.0 0.0 0.0 21 0.22341971609272693 0.0 0.0 0.0 0.0 22 0.22853264995615272 0.0 0.0 0.0 0.0 23 0.2344202707685824 0.0 0.0 0.0 0.0 24 0.2421671402586215 0.0 0.0 0.0 0.0 25 0.25115350886706683 0.0 0.0 0.0 0.0 26 0.2602948148653129 0.0 0.0 0.0 0.0 27 0.26804168435535203 0.0 0.0 0.0 0.0 28 0.2776478025230005 0.0 0.0 0.0 0.0 29 0.28461998506403563 0.0 0.0 0.0 0.0 30 0.2940711658418833 0.0 0.0 0.0 0.0 31 0.3046069083483364 0.0 0.0 0.0 0.0 32 0.31452290129558647 0.0 0.0 0.0 0.0 33 0.32180495861622316 0.0 0.0 0.0 0.0 34 0.3290870159368599 0.0 0.0 0.0 0.0 35 0.34318631840873104 0.0 0.0 0.0 0.0 36 0.35558130959279355 0.0 0.0 0.0 0.0 37 0.36410286603183656 0.0 0.0 0.0 0.0 38 0.37138492335247325 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGT 20 7.8539125E-4 44.0 43 AACGTGT 45 4.783942E-10 44.0 35 CTATGCA 45 4.783942E-10 44.0 41 CCTTATT 20 7.8539125E-4 44.0 36 ACTATAG 40 8.301868E-9 44.0 34 GTACCTA 20 7.8539125E-4 44.0 37 AACCGAT 55 1.8189894E-12 44.0 23 ATGATCG 20 7.8539125E-4 44.0 32 CGTATCT 40 8.301868E-9 44.0 22 CGTATCC 20 7.8539125E-4 44.0 13 ATTAGCC 25 4.440665E-5 44.0 34 GTACAGT 20 7.8539125E-4 44.0 13 ATAGGAT 40 8.301868E-9 44.0 10 GGTCGAC 20 7.8539125E-4 44.0 9 CCGATTT 20 7.8539125E-4 44.0 38 CACGGAT 25 4.440665E-5 44.0 23 TTAGCGG 20 7.8539125E-4 44.0 44 CGTGCAC 60 0.0 44.0 24 ATGGATA 40 8.301868E-9 44.0 11 GTTTACG 45 4.783942E-10 44.0 10 >>END_MODULE