##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527497_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1012476 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.982001548678685 33.0 31.0 33.0 31.0 34.0 2 31.366572639746522 31.0 31.0 33.0 30.0 34.0 3 32.27889747510064 33.0 31.0 34.0 31.0 34.0 4 36.153411043817336 37.0 35.0 37.0 35.0 37.0 5 35.36256365582987 35.0 35.0 37.0 33.0 37.0 6 36.13739189867216 37.0 35.0 37.0 35.0 37.0 7 36.64007245603847 37.0 37.0 37.0 35.0 37.0 8 36.769820716737975 37.0 37.0 37.0 37.0 37.0 9 38.761543977338725 39.0 39.0 39.0 39.0 39.0 10 37.50144200948961 39.0 37.0 39.0 35.0 39.0 11 37.83475855230149 39.0 37.0 39.0 35.0 39.0 12 37.711699832884925 39.0 37.0 39.0 35.0 39.0 13 37.67711728475539 39.0 37.0 39.0 35.0 39.0 14 38.34787194955732 40.0 38.0 40.0 35.0 40.0 15 38.42364065913661 40.0 38.0 40.0 35.0 40.0 16 38.53263879835176 40.0 38.0 40.0 35.0 40.0 17 38.513950947973086 40.0 38.0 40.0 35.0 40.0 18 38.41697383444151 40.0 38.0 40.0 35.0 40.0 19 38.40761262489185 40.0 38.0 40.0 35.0 40.0 20 38.324101509566646 40.0 38.0 40.0 34.0 40.0 21 38.29338571976027 40.0 38.0 40.0 34.0 40.0 22 38.332943200628954 40.0 38.0 40.0 35.0 40.0 23 38.264297622857235 40.0 38.0 40.0 35.0 40.0 24 38.245078401858414 40.0 38.0 40.0 35.0 40.0 25 38.27190471675378 40.0 38.0 40.0 35.0 40.0 26 38.18237370564833 40.0 38.0 40.0 35.0 40.0 27 38.172782367186976 40.0 38.0 40.0 35.0 40.0 28 38.121962397133366 40.0 38.0 40.0 35.0 40.0 29 38.080724876441515 40.0 38.0 40.0 35.0 40.0 30 37.95242652665347 40.0 37.0 40.0 34.0 40.0 31 37.90959291874573 40.0 37.0 40.0 34.0 40.0 32 37.86830601416725 40.0 37.0 40.0 34.0 40.0 33 37.70814814375847 40.0 36.0 40.0 34.0 40.0 34 37.37592594787432 39.0 36.0 40.0 33.0 40.0 35 37.39604593096528 39.0 36.0 40.0 33.0 40.0 36 37.39018307594451 39.0 35.0 40.0 34.0 40.0 37 37.3697430852682 39.0 35.0 40.0 34.0 40.0 38 37.44896175316748 40.0 35.0 40.0 34.0 40.0 39 37.44745949533618 40.0 35.0 40.0 34.0 40.0 40 37.39704842386387 40.0 35.0 40.0 34.0 40.0 41 37.30193703356919 40.0 35.0 40.0 34.0 40.0 42 37.22042892868572 40.0 35.0 40.0 33.0 40.0 43 37.28886808181132 40.0 35.0 40.0 33.0 40.0 44 37.17708469139021 39.0 35.0 40.0 33.0 40.0 45 37.11536075916861 39.0 35.0 40.0 33.0 40.0 46 36.98035805293163 39.0 35.0 40.0 33.0 40.0 47 36.92157937570866 39.0 35.0 40.0 33.0 40.0 48 36.80776630754704 39.0 35.0 40.0 33.0 40.0 49 36.730889423551766 39.0 35.0 40.0 33.0 40.0 50 36.996556955424126 39.0 35.0 40.0 33.0 40.0 51 37.06580205357954 39.0 35.0 40.0 33.0 40.0 52 36.75897897826714 39.0 35.0 40.0 33.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 5.0 15 9.0 16 13.0 17 33.0 18 91.0 19 117.0 20 227.0 21 358.0 22 532.0 23 872.0 24 1318.0 25 1834.0 26 2706.0 27 3690.0 28 5052.0 29 6496.0 30 9127.0 31 12717.0 32 18428.0 33 26554.0 34 60221.0 35 52569.0 36 91836.0 37 149429.0 38 451463.0 39 116775.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.3729234075672 0.45413422145315047 0.08721194378928487 0.08573042719037291 8 99.42467772075585 0.48425839229769396 0.07200170670712194 0.019062180239334068 9 97.3218130602602 1.6748051311833565 0.4002070172527546 0.6031747913036951 10 39.543060773786245 50.09936037990036 3.738854056787519 6.618724789525874 11 30.661171227762434 23.200352403414996 31.80470450657596 14.33377186224661 12 31.806976165360958 18.312434072511348 26.527246077931725 23.35334368419597 13 26.859402099407788 20.24907257060908 29.446228848881358 23.445296481101774 14 26.46107166984699 22.027583863716277 29.333633587364044 22.17771087907269 15 25.95271394087366 24.80088416910623 27.982589216929586 21.263812673090523 16 29.052639272437077 27.096444755233705 25.579766829040885 18.271149143288334 17 28.87535111943394 26.504233186761954 24.16333819270778 20.45707750109632 18 25.58668057316914 26.99925726634508 26.648927974589025 20.765134185896752 19 26.88587186264168 27.205681912460143 25.47280133059944 20.43564489429873 20 25.516061615287672 29.454920412928303 24.821427865944475 20.207590105839547 21 24.31613193794223 29.259360221871926 27.537245327296645 18.887262512889194 22 23.739624445418954 27.050814043987216 28.708631118169713 20.500930392424117 23 23.06642330287335 28.34556078366302 29.168888941565037 19.419126971898592 24 24.677720755850014 28.789028085604006 26.149163041889388 20.384088116656592 25 24.997925876761524 29.615418044477103 24.125510135548893 21.26114594321248 26 21.648710685487853 31.58089673236699 25.518234506299407 21.25215807584575 27 20.687601483887025 28.107135379011456 27.300894045883556 23.904369091217966 28 21.348357887001765 30.808631513240808 25.091162654719717 22.75184794503771 29 23.757106341286114 30.554106961547728 24.46102426131582 21.22776243585033 30 24.685424642164357 27.677495565326982 26.143730814360044 21.493348978148617 31 23.520952595419544 28.44679775125534 26.629668258803175 21.402581394521945 32 26.286647782268417 28.63376514603803 24.308032980534847 20.771554091158702 33 26.21978199977086 28.258348839873737 25.174917726444875 20.346951433910533 34 22.796194675231806 30.174641176679746 28.05972684784627 18.969437300242177 35 21.313394095267444 33.264788498690336 25.93740493601824 19.484412470023983 36 22.08141230014341 33.25589939909687 24.914269572809626 19.748418727950096 37 23.515717903436723 31.813099767303125 25.355366448192353 19.3158158810678 38 23.601843401720142 32.66260138511925 23.92224605817817 19.813309154982438 39 23.306033920804047 30.399831699714362 24.448974592978008 21.845159786503583 40 23.312355058292738 30.153406105428672 24.094497054745002 22.439741781533588 41 21.324949924738956 31.581193035686773 24.2330682406299 22.86078879894437 42 20.22566460834627 31.432448769156007 24.570162650769007 23.77172397172871 43 20.713774943801138 30.332669613897025 25.230820286110482 23.72273515619136 44 22.142747087338364 30.630651985824848 24.088669756122613 23.13793117071417 45 23.052101975750535 30.495735207550602 23.28242842299472 23.169734393704147 46 21.045338358637636 33.41837238611088 24.27346425989357 21.262824995357914 47 21.042869164306115 31.574378059331774 25.30924189807956 22.073510878282544 48 21.316752199558312 31.15086184758947 25.834488916280485 21.69789703657173 49 23.118375151608532 31.386027915723435 24.4333692848028 21.062227647865235 50 21.7309842406141 31.180788482887493 24.269711084509655 22.81851619198875 51 20.704984611980926 31.45595549919208 25.757647588683586 22.08141230014341 52 20.872000916564936 30.667196061931346 26.936045891458164 21.52475713004555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 1.0 6 2.0 7 33.0 8 64.0 9 1388.0 10 2712.0 11 6930.0 12 11148.0 13 13078.0 14 13078.0 15 11148.0 16 10014.5 17 8881.0 18 8965.0 19 9049.0 20 8237.0 21 7425.0 22 7726.0 23 8027.0 24 10603.0 25 13179.0 26 13117.0 27 13055.0 28 16161.0 29 19267.0 30 20434.5 31 21602.0 32 22704.5 33 23807.0 34 24315.0 35 24823.0 36 30429.5 37 36036.0 38 36281.5 39 39259.0 40 41991.0 41 43323.0 42 44655.0 43 45679.0 44 46703.0 45 48415.0 46 50127.0 47 52661.0 48 55195.0 49 55390.0 50 55585.0 51 60202.0 52 64819.0 53 63944.0 54 63069.0 55 66923.0 56 70777.0 57 65395.0 58 60013.0 59 62118.0 60 64223.0 61 59325.0 62 54427.0 63 42829.5 64 25928.0 65 20624.0 66 17011.0 67 13398.0 68 9376.5 69 5355.0 70 4912.0 71 4469.0 72 3335.0 73 2201.0 74 1627.0 75 1053.0 76 706.0 77 359.0 78 339.0 79 319.0 80 179.0 81 39.0 82 59.0 83 79.0 84 41.5 85 4.0 86 2.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1012476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.304418080033502 #Duplication Level Percentage of deduplicated Percentage of total 1 69.03667533570405 6.4234609017892765 2 8.87426357412027 1.6513971689205473 3 3.0072713762539145 0.8394273049435247 4 1.3916458786688604 0.5179382029796261 5 0.7908285122870337 0.3679099553964736 6 0.5891407037843002 0.32889668495845825 7 0.4999734621304602 0.3256373484408519 8 0.4139907648214002 0.30815545257369065 9 0.39382198397112683 0.32978559491780546 >10 9.750013268934769 23.253687000975827 >50 2.866089910302001 18.507599192474686 >100 2.3247173716894007 40.56362817489007 >500 0.046706650390106685 2.800066371943631 >1k 0.012738177379120004 2.285486273254872 >5k 0.0021230295631866677 1.4969243715406588 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 8338 0.823525693448536 No Hit CATGATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 6818 0.6733986780921227 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 4423 0.4368498611325108 No Hit CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 3495 0.34519336754649 No Hit CATGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2393 0.23635128141309028 No Hit CATGATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2049 0.20237516741137568 No Hit CATGATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 1986 0.19615279769594537 No Hit CATGATGGGCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGT 1587 0.1567444561648869 No Hit CATGATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1460 0.1442009489607655 No Hit CATGATGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1298 0.12820056969251617 No Hit CATGATGGGCGGGCAACTTGAAGGCATCCTGAGAGAACTCAAAGAAGTGGCT 1181 0.11664474022100278 No Hit CATGATGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 1147 0.11328663593013562 No Hit CATGATGGGATTTTACAACTTTTTTCCTGGCTTTATTATATAAATTTTCTAT 1101 0.10874331836013891 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCTCTGACTACTC 1020 0.10074312872601424 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.001777819918694369 0.0 0.0 0.0 0.0 8 0.0026667298780415536 0.0 0.0 0.0 0.0 9 0.003555639837388738 0.0 0.0 0.0 0.0 10 0.021926445663897218 0.0 0.0 0.0 0.0 11 0.035358862827365785 0.0 0.0 0.0 0.0 12 0.04543317569996721 0.0 0.0 0.0 0.0 13 0.05392720420039586 0.0 0.0 0.0 0.0 14 0.06518673035212687 0.0 0.0 0.0 0.0 15 0.07782900532950905 0.0 0.0 0.0 0.0 16 0.08849592484167526 0.0 0.0 0.0 0.0 17 0.09886654103405908 0.0 0.0 0.0 0.0 18 0.10815071172057411 0.0 0.0 0.0 0.0 19 0.11970654119208751 0.0 0.0 0.0 0.0 20 0.13047222847751452 0.0 0.0 0.0 0.0 21 0.13946009584424718 0.0 0.0 0.0 0.0 22 0.14785535657141502 0.0 0.0 0.0 0.0 23 0.15743583057771246 0.0 0.0 0.0 0.0 24 0.16760891122357469 0.0 0.0 0.0 0.0 25 0.1770906174566113 0.0 0.0 0.0 0.0 26 0.18667109146290875 0.0 0.0 0.0 0.0 27 0.19793061761463976 0.0 0.0 0.0 0.0 28 0.21906692109245057 0.0 0.0 0.0 0.0 29 0.23269687380244075 0.0 0.0 0.0 0.0 30 0.24583298764612693 0.0 0.0 0.0 0.0 31 0.25570976497220677 0.0 0.0 0.0 0.0 32 0.26548777452502575 0.0 0.0 0.0 0.0 33 0.275660855170888 0.0 0.0 0.0 0.0 34 0.28484625808414227 0.0 0.0 0.0 0.0 35 0.2984762107941324 0.0 0.0 0.0 0.0 36 0.3125012345971658 0.0 0.0 0.0 0.0 37 0.32524227734780875 0.0 0.0 0.0 0.0 38 0.33531659022041016 0.0 0.0 0.0 0.0 39 0.34292170876149164 0.0 0.0 0.0 0.0 40 0.35309478940735384 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAATCCG 40 5.6097633E-9 46.000004 34 CGAAACT 20 6.311095E-4 46.000004 37 CGAAAAC 20 6.311095E-4 46.000004 28 GCGCGTT 20 6.311095E-4 46.000004 42 ACGCACC 40 5.6097633E-9 46.000004 39 TCTTCGA 40 5.6097633E-9 46.000004 21 ATTCGCT 20 6.311095E-4 46.000004 12 TAACGTT 20 6.311095E-4 46.000004 14 TAACGGG 20 6.311095E-4 46.000004 40 ACGGGAT 20 6.311095E-4 46.000004 14 AACGGGC 20 6.311095E-4 46.000004 41 CGTAGTA 20 6.311095E-4 46.000004 38 CTACGAG 20 6.311095E-4 46.000004 33 CGCTAGA 20 6.311095E-4 46.000004 31 CGAGCTT 20 6.311095E-4 46.000004 36 TCGTACG 20 6.311095E-4 46.000004 33 TATAGCG 20 6.311095E-4 46.000004 15 TAGGCGA 20 6.311095E-4 46.000004 32 CGCGTTT 20 6.311095E-4 46.000004 43 TAAATCG 20 6.311095E-4 46.000004 22 >>END_MODULE