##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527496_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1324936 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.877289921928305 31.0 31.0 33.0 30.0 33.0 2 29.706205431809536 31.0 30.0 31.0 25.0 33.0 3 30.984166782395526 31.0 31.0 33.0 28.0 34.0 4 35.336944576945605 35.0 35.0 37.0 33.0 37.0 5 34.248466341015714 35.0 35.0 37.0 32.0 37.0 6 35.39159702808286 35.0 35.0 37.0 33.0 37.0 7 36.309036059100215 37.0 35.0 37.0 35.0 37.0 8 36.58481013422535 37.0 37.0 37.0 35.0 37.0 9 38.63334983727516 39.0 39.0 39.0 38.0 39.0 10 36.70564163099199 39.0 37.0 39.0 32.0 39.0 11 37.101072051782126 39.0 37.0 39.0 34.0 39.0 12 37.02777568124045 39.0 37.0 39.0 34.0 39.0 13 36.98235160037919 39.0 37.0 39.0 33.0 39.0 14 37.627308036010795 40.0 37.0 40.0 33.0 40.0 15 37.71195438874029 40.0 37.0 40.0 33.0 40.0 16 37.804623015753215 40.0 37.0 40.0 33.0 40.0 17 37.83333685551604 40.0 37.0 40.0 33.0 40.0 18 37.76326932017849 40.0 37.0 40.0 33.0 40.0 19 37.72585996606629 40.0 37.0 40.0 33.0 40.0 20 37.586506819952056 40.0 37.0 40.0 33.0 40.0 21 37.62997080613705 40.0 37.0 40.0 33.0 40.0 22 37.672334361810684 40.0 37.0 40.0 33.0 40.0 23 37.684620993014 39.0 37.0 40.0 34.0 40.0 24 37.70892254418327 39.0 37.0 40.0 34.0 40.0 25 37.75352092478429 39.0 37.0 40.0 34.0 40.0 26 37.643135970341206 39.0 37.0 40.0 34.0 40.0 27 37.63014288992072 39.0 37.0 40.0 34.0 40.0 28 37.498053490885596 39.0 36.0 40.0 33.0 40.0 29 37.46706557901665 39.0 36.0 40.0 33.0 40.0 30 37.3871115284059 39.0 36.0 40.0 33.0 40.0 31 37.295365210093166 39.0 36.0 40.0 33.0 40.0 32 37.284528460242605 39.0 36.0 40.0 33.0 40.0 33 37.18742943055363 39.0 35.0 40.0 33.0 40.0 34 36.83603585380728 39.0 35.0 40.0 32.0 40.0 35 36.84055531738892 39.0 35.0 40.0 32.0 40.0 36 36.87622647433536 39.0 35.0 40.0 32.0 40.0 37 36.89332239444018 39.0 35.0 40.0 33.0 40.0 38 36.79611769927 38.0 35.0 40.0 32.0 40.0 39 36.74125693618409 38.0 35.0 40.0 32.0 40.0 40 37.00769320178484 39.0 35.0 40.0 33.0 40.0 41 37.0447319719594 39.0 35.0 40.0 33.0 40.0 42 37.088509935574244 39.0 35.0 40.0 33.0 40.0 43 37.1192865164808 39.0 35.0 40.0 33.0 40.0 44 37.03096602401927 39.0 35.0 40.0 33.0 40.0 45 36.99589640556223 39.0 35.0 40.0 33.0 40.0 46 36.78343255825187 39.0 35.0 40.0 33.0 40.0 47 36.7715776460146 39.0 35.0 40.0 33.0 40.0 48 36.73636160539075 39.0 35.0 40.0 33.0 40.0 49 36.690098993460815 39.0 35.0 40.0 33.0 40.0 50 36.58623058019406 39.0 35.0 40.0 32.0 40.0 51 36.47778760634476 39.0 35.0 40.0 32.0 40.0 52 36.05069754312661 38.0 35.0 40.0 31.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 8.0 15 12.0 16 27.0 17 74.0 18 115.0 19 216.0 20 341.0 21 613.0 22 1073.0 23 1618.0 24 2453.0 25 3745.0 26 5130.0 27 7279.0 28 9989.0 29 13691.0 30 18632.0 31 25619.0 32 36295.0 33 53822.0 34 93387.0 35 85528.0 36 149799.0 37 236778.0 38 517103.0 39 61587.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 0.0 100.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 100.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.43718036191936 0.4380588949202075 0.05298369128773012 0.07177705187269423 8 99.47559731187016 0.4560975020680244 0.046115435009691036 0.02218975105212629 9 97.28326500298883 1.7163847914163401 0.38364117210189774 0.6167090334929386 10 39.52017304986807 50.11389229366551 3.7011599050822075 6.664774751384218 11 30.269914924192566 23.49841803679574 31.802743679694718 14.428923359316977 12 31.60401709969387 18.42677684054173 26.558188470990295 23.4110175887741 13 26.667023916626913 20.431401969604572 29.388136483573547 23.513437630194968 14 26.192057578630212 22.163334681826143 29.347153371936457 22.297454367607187 15 25.927667449597564 24.820972484708694 27.868591388565182 21.382768677128556 16 29.009552159500533 27.041155195420757 25.500854380890853 18.448438264187857 17 28.774823840547768 26.491543742490204 24.187281498879944 20.546350918082084 18 25.633162658422748 26.91556422347947 26.57788753569984 20.873385582397944 19 26.838126520828176 27.088931087992172 25.58387725897704 20.48906513220261 20 25.518213709945236 29.304056950675356 24.998792394500565 20.17893694487885 21 24.196489490813143 29.178541454077784 27.60963548427999 19.015333570829082 22 23.63880217610511 26.89435565189564 28.77006889389374 20.69677327810551 23 23.011828495866972 28.207173780469397 29.241487890735858 19.539509832927777 24 24.512806656321512 28.63209996558324 26.411087026090318 20.444006352004926 25 24.807915250246047 29.44693177632731 24.36215787026694 21.3829951031597 26 21.70089725088608 31.386044307045776 25.65271077244486 21.260347669623286 27 20.727416267653684 27.77922858160696 27.432947704643844 24.06040744609551 28 21.458772348249276 30.67416086512858 25.04354927332339 22.823517513298754 29 23.803111999372046 30.36682526552226 24.53975135402767 21.290311381078027 30 24.759988406987205 27.55401015596225 26.16028245892632 21.525718978124225 31 23.706729985448355 28.22430668349264 26.701516148704542 21.367447182354468 32 26.208888580278593 28.380540644982098 24.39348013790855 21.01709063683076 33 26.093033927676508 28.112452224107425 25.33405387128133 20.460459976934736 34 22.731286643279375 30.085604134841233 28.103093281486803 19.08001594039259 35 21.371900227633635 33.220925388094216 25.87906132824529 19.528113056026857 36 21.959551253796413 33.068238767759354 25.036681017045353 19.93552896139889 37 23.485662703707952 31.63511294130433 25.545611259713674 19.333613095274035 38 23.604385419371198 32.45696395901387 24.014065585054674 19.92458503656026 39 23.291238218298847 30.247498747109297 24.53522283340478 21.926040201187078 40 23.13168334168594 30.26199001310252 24.177545179540747 22.428781465670795 41 21.41009075155328 31.494426900620105 24.17294118357415 22.92254116425246 42 20.065572978619343 31.389591648200366 24.66639898078096 23.87843639239933 43 20.682055586081137 30.16304183749253 25.427114970081572 23.72778760634476 44 22.078123018772228 30.487963192184374 24.19724424425029 23.236669544793106 45 23.02639523720391 30.40682719769106 23.401205794091187 23.165571771013845 46 21.13264338805799 33.04204882349035 24.540204206089953 21.285103582361714 47 20.99150449531147 31.267170640695095 25.615350477306077 22.125974386687357 48 21.288801874203735 31.03561228617835 26.066617557376354 21.60896828224156 49 23.08639813545711 31.21720596315596 24.51008954394778 21.186306357439154 50 21.76633437388674 30.99281776629211 24.395668922876272 22.84517893694488 51 20.69835826032352 31.424612207683992 25.841927459137647 22.03510207285484 52 20.844101149036636 30.591213462386108 26.93986728415561 21.624818104421646 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 3.5 6 6.0 7 42.5 8 79.0 9 1804.0 10 3529.0 11 8788.0 12 14047.0 13 16465.5 14 16542.5 15 14201.0 16 12733.0 17 11265.0 18 11282.5 19 11300.0 20 10444.0 21 9588.0 22 10024.0 23 10460.0 24 14132.5 25 17805.0 26 17286.0 27 16767.0 28 20888.0 29 25009.0 30 26716.0 31 28423.0 32 30075.5 33 31728.0 34 32157.0 35 32586.0 36 39792.0 37 46998.0 38 47402.0 39 51770.5 40 55735.0 41 57695.5 42 59656.0 43 60720.0 44 61784.0 45 63927.5 46 66071.0 47 69206.5 48 72342.0 49 73109.0 50 73876.0 51 79552.5 52 85229.0 53 83564.0 54 81899.0 55 87246.5 56 92594.0 57 85276.0 58 77958.0 59 81349.5 60 84741.0 61 77239.0 62 69737.0 63 55381.0 64 33749.5 65 26474.0 66 21995.0 67 17516.0 68 12268.5 69 7021.0 70 6254.5 71 5488.0 72 4161.5 73 2835.0 74 2092.0 75 1349.0 76 919.0 77 489.0 78 477.0 79 465.0 80 265.0 81 65.0 82 83.0 83 101.0 84 52.5 85 4.0 86 2.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1324936.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.739505980327118 #Duplication Level Percentage of deduplicated Percentage of total 1 70.22758965082912 6.137544397373799 2 9.467865389475993 1.6548893238451514 3 3.496299616617768 0.9166779422533917 4 1.5205832585808001 0.531565859278088 5 0.8815053041242283 0.38519604385418843 6 0.5336475018521728 0.27982893202942144 7 0.36584273227507524 0.22380993226040632 8 0.31913730525005496 0.2231281910222669 9 0.3104882151616607 0.24421622519037842 >10 7.2891196099110145 17.099136943719664 >50 2.9405560770987793 18.03072594804227 >100 2.535797181780477 44.7311632202893 >500 0.09600050722293074 5.461265832972392 >1k 0.012973041516612261 2.200439717790158 >5k 0.001729738868881635 1.0717997800997678 >10k+ 8.648694344408175E-4 0.8086117099793594 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 10698 0.807435227060024 No Hit CATGATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 8687 0.6556543108497316 No Hit CATGATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5493 0.41458606302493106 No Hit CATGATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 4769 0.35994191417547716 No Hit CATGATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2986 0.2253693763321398 No Hit CATGATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2634 0.19880205534456002 No Hit CATGATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGAGG 2291 0.17291401245041269 No Hit CATGATGGGCACATTATTGACAGTCTTGCATTTTGTTTTGTCTCGTGATGGT 2229 0.16823454114010036 No Hit CATGATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1957 0.14770524764969778 No Hit CATGATGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1661 0.12536454591014207 No Hit CATGATGGGATTTTACAACTTTTTTCCTGGCTTTATTATATAAATTTTCTAT 1620 0.12227005681783876 No Hit CATGATGGGCGGGCAACTTGAAGGCATCCTGAGAGAACTCAAAGAAGTGGCT 1610 0.1215153033806916 No Hit CATGATGGGGGGGCTGGCGAGATGGCTCAGCGGGTAAGAGCACCCGATTGCT 1508 0.11381681832179064 No Hit CATGATGGGATGATAGGCTGCGGTGGCTTTCTGTGATGCAGCTGTTTTTGAG 1361 0.1027219427957275 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0012830808431501597 0.0 0.0 0.0 0.0 8 0.001962358936582597 0.0 0.0 0.0 0.0 9 0.0025661616863003195 0.0 0.0 0.0 0.0 10 0.017208378366955084 0.0 0.0 0.0 0.0 11 0.028756105955306522 0.0 0.0 0.0 0.0 12 0.03683196773278106 0.0 0.0 0.0 0.0 13 0.043700224010820146 0.0 0.0 0.0 0.0 14 0.05328559266258898 0.0 0.0 0.0 0.0 15 0.0627954859706431 0.0 0.0 0.0 0.0 16 0.07472059027756812 0.0 0.0 0.0 0.0 17 0.08415500824190754 0.0 0.0 0.0 0.0 18 0.09223087001938207 0.0 0.0 0.0 0.0 19 0.10219361538972449 0.0 0.0 0.0 0.0 20 0.1111751812917756 0.0 0.0 0.0 0.0 21 0.11894914169439127 0.0 0.0 0.0 0.0 22 0.12521359522271264 0.0 0.0 0.0 0.0 23 0.13276112959418418 0.0 0.0 0.0 0.0 24 0.1421955475585236 0.0 0.0 0.0 0.0 25 0.15034688467971283 0.0 0.0 0.0 0.0 26 0.16264936570521143 0.0 0.0 0.0 0.0 27 0.17276306176298326 0.0 0.0 0.0 0.0 28 0.1873298030999233 0.0 0.0 0.0 0.0 29 0.2005379882499985 0.0 0.0 0.0 0.0 30 0.21253856790063821 0.0 0.0 0.0 0.0 31 0.2222748872398365 0.0 0.0 0.0 0.0 32 0.23261500932875248 0.0 0.0 0.0 0.0 33 0.24250227935538018 0.0 0.0 0.0 0.0 34 0.25352167953772864 0.0 0.0 0.0 0.0 35 0.27050363187353954 0.0 0.0 0.0 0.0 36 0.283108014273897 0.0 0.0 0.0 0.0 37 0.29510859392453676 0.0 0.0 0.0 0.0 38 0.3046939625763056 0.0 0.0 0.0 0.0 39 0.3137510038220714 0.0 0.0 0.0 0.0 40 0.3243175519421315 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACT 35 1.01972546E-7 46.000004 22 ACGCCAC 70 0.0 46.000004 19 AGCGCGA 35 1.01972546E-7 46.000004 46 TCGTCCG 35 1.01972546E-7 46.000004 12 ATGCGAG 35 1.01972546E-7 46.000004 13 TGGTCGA 35 1.01972546E-7 46.000004 24 TCGTTGC 25 3.4174394E-5 46.0 37 TCGCATA 20 6.311805E-4 46.0 37 GTCGCGA 20 6.311805E-4 46.0 11 CGTATTG 20 6.311805E-4 46.0 19 ACGCCGT 20 6.311805E-4 46.0 43 ATAGGCG 20 6.311805E-4 46.0 5 CGAAAGT 45 3.110472E-10 46.0 39 CATGCGA 25 3.4174394E-5 46.0 24 GCGCGTT 20 6.311805E-4 46.0 42 GCGAACT 20 6.311805E-4 46.0 43 CGCATAT 45 3.110472E-10 46.0 26 GGCGTAG 30 1.8616192E-6 46.0 8 TAGCGGA 30 1.8616192E-6 46.0 15 CGGCACC 20 6.311805E-4 46.0 42 >>END_MODULE