##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527492_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1964841 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.613386528477367 31.0 31.0 33.0 30.0 34.0 2 30.903831913116633 31.0 31.0 33.0 28.0 34.0 3 31.90483046719811 31.0 31.0 34.0 30.0 34.0 4 36.04684297609832 37.0 35.0 37.0 35.0 37.0 5 35.30444448176723 37.0 35.0 37.0 33.0 37.0 6 35.872583074152054 37.0 35.0 37.0 35.0 37.0 7 36.51060569277616 37.0 37.0 37.0 35.0 37.0 8 36.69689506682729 37.0 37.0 37.0 35.0 37.0 9 38.66242255734688 39.0 39.0 39.0 39.0 39.0 10 37.8236529062657 39.0 38.0 39.0 35.0 39.0 11 37.56296514578025 39.0 37.0 39.0 35.0 39.0 12 36.36583214621437 37.0 35.0 39.0 33.0 39.0 13 36.21716057431619 37.0 35.0 39.0 33.0 39.0 14 36.744697408085436 39.0 35.0 40.0 33.0 40.0 15 36.76107837733435 38.0 35.0 40.0 33.0 40.0 16 36.868381716383155 38.0 35.0 40.0 33.0 40.0 17 36.756589973438054 38.0 35.0 40.0 33.0 40.0 18 36.651463400855334 38.0 35.0 40.0 33.0 40.0 19 36.57203509088013 38.0 35.0 40.0 32.0 40.0 20 36.36447529342069 38.0 34.0 40.0 32.0 40.0 21 36.35698511991556 38.0 34.0 40.0 32.0 40.0 22 36.337772878314325 38.0 35.0 40.0 32.0 40.0 23 36.270906907988994 37.0 35.0 40.0 32.0 40.0 24 36.23805692165422 37.0 35.0 40.0 32.0 40.0 25 36.05741329705559 37.0 34.0 39.0 32.0 40.0 26 35.596356651759606 36.0 34.0 39.0 31.0 40.0 27 35.57059120814356 36.0 34.0 39.0 31.0 40.0 28 35.52805494185026 36.0 34.0 38.0 31.0 40.0 29 35.25055767871294 35.0 34.0 38.0 31.0 40.0 30 34.949232024372456 35.0 34.0 38.0 31.0 40.0 31 34.7555517214879 35.0 34.0 38.0 30.0 40.0 32 34.59085544326487 35.0 34.0 38.0 30.0 39.0 33 33.71462067414106 35.0 32.0 38.0 27.0 39.0 34 32.92983859762698 34.0 31.0 38.0 23.0 39.0 35 32.86384954304191 34.0 31.0 37.0 23.0 39.0 36 32.96387290371079 34.0 31.0 37.0 25.0 38.0 37 33.07750550807928 34.0 31.0 37.0 27.0 38.0 38 32.69158624031156 34.0 31.0 36.0 27.0 38.0 39 32.21667503884538 34.0 31.0 36.0 25.0 38.0 40 32.183270809190155 34.0 31.0 36.0 25.0 38.0 41 31.935470096562522 34.0 30.0 35.0 24.0 38.0 42 31.500807444470063 33.0 30.0 35.0 24.0 38.0 43 30.68566056999014 32.0 29.0 35.0 23.0 38.0 44 30.10015110637451 32.0 27.0 34.0 22.0 37.0 45 29.683631398164025 31.0 26.0 34.0 20.0 37.0 46 29.79052757958532 31.0 26.0 34.0 20.0 37.0 47 29.58556392094831 31.0 26.0 34.0 20.0 37.0 48 29.44201948147458 31.0 26.0 34.0 20.0 36.0 49 29.158602655380257 31.0 26.0 34.0 20.0 36.0 50 32.20760204006329 34.0 31.0 36.0 25.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 7.0 14 22.0 15 57.0 16 170.0 17 402.0 18 711.0 19 1177.0 20 1688.0 21 2556.0 22 3876.0 23 5687.0 24 8238.0 25 11164.0 26 15686.0 27 21345.0 28 29292.0 29 40970.0 30 58785.0 31 88682.0 32 166484.0 33 313127.0 34 257357.0 35 312212.0 36 471913.0 37 149908.0 38 3317.0 39 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 100.0 0.0 0.0 0.0 4 0.0 0.0 0.0 100.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 100.0 0.0 7 99.37786314516035 0.5020253547233593 0.09949914522345575 0.020612354892838657 8 99.36844762502412 0.42573419426813675 0.14041848678849841 0.06539969391925352 9 97.78368834933717 1.4024035532646153 0.34715277215815427 0.4667553252400576 10 69.57178723367437 20.415545074639628 3.8315059590063525 6.181161732679642 11 53.46865217083724 14.811885541883541 16.046132994985346 15.67332929229388 12 48.06159887746642 11.97633803447709 19.37149112828977 20.590571959766717 13 33.780545092452776 11.939388479780298 22.704483467110062 31.575582960656867 14 27.906990947359102 13.094545563737729 34.15787842375032 24.840585065152855 15 36.420809622763365 13.787527845764618 30.281279757496915 19.510382773975095 16 44.501412582493955 16.69621104201307 24.09121145171543 14.711164923777547 17 39.33595644634858 19.870513695510223 24.179361078071963 16.614168780069228 18 39.40873587226651 22.907298860314906 21.73152942146464 15.952435845953946 19 35.100041173815086 31.309352766966896 19.17249283784286 14.418113221375165 20 37.649662237300625 29.545647713988053 17.809278206226356 14.995411842484966 21 31.262682323913232 32.50782124355101 22.33600581421092 13.893490618324842 22 29.08311664913344 24.170963452004514 31.109641950671836 15.63627794819021 23 37.81013323724413 19.14327927806881 27.193548994549687 15.853038490137369 24 42.67500525487813 15.244236047598763 21.331191684212616 20.74956701331049 25 32.83924755234647 15.050123648682007 20.634850351758743 31.475778447212775 26 23.627204440461085 16.333789858823184 28.710923682883244 31.328082017832486 27 18.77256225821835 18.84610510468786 25.880414751117264 36.50091788597653 28 21.192656301451365 28.99318570815654 20.103204279633825 29.710953710758275 29 32.33732398702999 26.208227535968557 19.885171370100686 21.56927710690076 30 32.540699221972666 19.52997723479915 26.278767594935164 21.650555948293018 31 39.3134609874285 17.204954497590393 23.88931216317249 19.59227235180862 32 45.27460491714088 16.33211033360969 22.036134221547698 16.357150527701734 33 41.73599797642659 17.40349473570635 26.304825683095984 14.555681604771072 34 27.162350541341514 22.041172797188167 36.415109415978186 14.38136724549213 35 22.112170908485727 35.24290260636866 29.279213941484322 13.365712543661292 36 22.30821730613317 42.52674898376001 20.97726991649706 14.187763793609761 37 32.409848939430724 36.71579532389644 15.755778711865235 15.118577024807605 38 32.06686953295457 36.66724177681553 15.488021677072089 15.777867013157806 39 35.75098443080127 28.32071399161561 14.870618029652272 21.05768354793085 40 27.51326952155416 25.01540837146619 15.51077160950937 31.96055049747028 41 20.323272977304523 30.389787265229096 16.454461200677308 32.83247855678908 42 18.321024449306584 25.29833202788419 17.973159151300283 38.40748437150894 43 19.27967708328562 20.167433395373976 21.588566199504182 38.96432332183622 44 24.728209559959303 18.50144617299822 20.00915086767835 36.761193399364124 45 28.22711863199109 24.400142301590815 19.183995040820097 28.188744025598 46 24.732281136234434 28.751792129744853 18.378230095972143 28.137696638048578 47 20.9600166120312 23.322192482750513 25.561915696995328 30.155875208222955 48 25.89283305875641 20.458601993749113 29.619190560457564 24.029374387036913 49 30.102639348425647 16.182479905498713 25.082843853523006 28.63203689255263 50 23.87002307056907 16.099674223003284 29.255140746757625 30.775161959670015 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.0 4 2.0 5 18.0 6 34.0 7 81.0 8 128.0 9 290.5 10 453.0 11 692.5 12 932.0 13 1218.0 14 1504.0 15 1559.5 16 1615.0 17 2043.5 18 2472.0 19 2618.5 20 2765.0 21 3174.5 22 3584.0 23 5091.5 24 6599.0 25 6880.5 26 7162.0 27 9898.0 28 12634.0 29 13551.5 30 14469.0 31 17275.0 32 20081.0 33 24311.5 34 28542.0 35 27503.5 36 26465.0 37 29141.5 38 31818.0 39 34100.0 40 36382.0 41 40607.5 42 44833.0 43 47156.0 44 49479.0 45 52619.5 46 55760.0 47 57841.0 48 59922.0 49 65803.5 50 71685.0 51 80223.0 52 88761.0 53 102173.5 54 115586.0 55 156608.5 56 197631.0 57 224934.0 58 252237.0 59 272544.0 60 292851.0 61 302362.5 62 311874.0 63 210808.5 64 109743.0 65 81229.5 66 52716.0 67 37589.5 68 22463.0 69 20402.5 70 18342.0 71 14515.5 72 10689.0 73 8157.0 74 5625.0 75 5090.0 76 4555.0 77 3207.0 78 1859.0 79 1098.0 80 337.0 81 205.0 82 73.0 83 121.5 84 170.0 85 86.5 86 3.0 87 3.5 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1964841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 8.412044675378725 #Duplication Level Percentage of deduplicated Percentage of total 1 70.94902304100292 5.968263514953912 2 10.411433200866654 1.751628824408232 3 4.001270618121288 1.009766015937496 4 1.8611753704453096 0.6262516145960197 5 1.0682618087728426 0.44931330301990186 6 0.6621463470788808 0.33420027919598233 7 0.4759738152797506 0.28027390989106066 8 0.4042181243688288 0.2720240736630706 9 0.3324933362999114 0.251725391929852 >10 6.000530660346507 13.405856225902104 >50 2.0219515100457706 11.694064739027473 >100 1.5736455191306449 29.6131254391395 >500 0.1585844321604526 9.2483968430369 >1k 0.06892323397742747 10.458865458028919 >5k 0.005489461113246436 3.0928211954520157 >10k+ 0.004879520989552388 11.543423171817548 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 74898 3.8119114981822957 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 47488 2.416887676916351 No Hit TAGCATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 31362 1.5961596892572987 No Hit TAGCATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 28222 1.4363503204585002 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCT 12163 0.6190322779298681 No Hit TAGCATGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGC 10694 0.5442679585778187 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCT 10110 0.5145454517693798 No Hit TAGCATGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 10044 0.5111864013423987 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 8753 0.44548133920251054 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG 8520 0.4336228733011985 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 8467 0.43092545401892574 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 7025 0.3575352916597323 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGCCGTTAAAGGCTAGGCTCACA 6249 0.3180410017909846 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 5480 0.2789029748463107 No Hit TAGCATGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCA 5450 0.2773761337431375 No Hit TAGCATGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 5247 0.2670445089449986 No Hit TAGCATGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 5088 0.25895225109818043 No Hit TAGCATGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCAC 4849 0.24678841697623372 No Hit TAGCATGGGGCCGGTAGTGGTGGCGCACGCCGGTAGGATTTGCTGAAGGA 4792 0.24388741888020457 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTTC 4760 0.2422587883701531 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCT 4747 0.24159715722544473 No Hit TAGCATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 3710 0.18881934975908993 No Hit TAGCATGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 3615 0.18398435293237467 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 3141 0.1598602635022376 No Hit TAGCATGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGAC 2946 0.14993579633161155 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCTACTGC 2941 0.14968132281441604 No Hit TAGCATGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC 2910 0.14810358700780368 No Hit TAGCATGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 2883 0.1467294300149478 No Hit TAGCATGGGGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGG 2871 0.1461186935736785 No Hit TAGCATGGGGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGCGCCGACTGC 2866 0.14586422005648295 No Hit TAGCATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGGACACTGACTCC 2817 0.14337037958796667 No Hit TAGCATGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCATTGACTGC 2774 0.141181907340085 No Hit TAGCATGGGGGGCTGGTGAGATGGCTCAGCGTGTAAGAGCACCCGACTGT 2652 0.13497275352051386 No Hit TAGCATGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 2632 0.13395485945173172 No Hit TAGCATGGGGGGGCAGGAGAGATGGCTCAGTGGATAAGAGCACAGACTGC 2628 0.13375128063797528 No Hit TAGCATGGGATGCCACAACTAGATACATCAACATGATTTATCACAATTAT 2614 0.13303875478982777 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGATAAGAGCACCTGACTG 2566 0.1305958090247506 No Hit TAGCATGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACT 2561 0.13034133550755506 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGCGGTTACGAGCACTGACTGCT 2505 0.12749123211496502 No Hit TAGCATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 2410 0.12265623528824977 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTG 2272 0.11563276621365291 No Hit TAGCATGGGGGGGCTGGTGAGATGGCTCAGTGAGTAAGAGCACCCGACTG 2261 0.11507292447582272 No Hit TAGCATGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCG 2239 0.11395324100016235 No Hit TAGCATGGGGGGCATGGTGGCACACGCCTTTAATACCAGCACTCAGTAGG 2148 0.10932182298720354 No Hit TAGCATGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 2135 0.10866019184249515 No Hit TAGCATGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 2132 0.10850750773217781 No Hit TAGCATGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 2111 0.10743871895995656 No Hit TAGCATGGGGAGCCGGGCGTGGTGGCGCATGCCTTTAATCCCAGCACTCG 2041 0.103876089719219 No Hit TAGCATGGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTG 2035 0.10357072149858437 No Hit TAGCATGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTC 1993 0.10143314395414182 No Hit TAGCATGGGGGGCTGGCGAGATGGCTCAGTGGTTAAGAGCGCCGACTGCT 1969 0.10021167107160324 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.143152550257247E-4 0.0 0.0 0.0 0.0 8 0.0013741569928559104 0.0 0.0 0.0 0.0 9 0.0017813146203687728 0.0 0.0 0.0 0.0 10 0.011145940053164606 0.0 0.0 0.0 0.0 11 0.024989299388601928 0.0 0.0 0.0 0.0 12 0.033641398973250254 0.0 0.0 0.0 0.0 13 0.040054131606577836 0.0 0.0 0.0 0.0 14 0.046924916570857386 0.0 0.0 0.0 0.0 15 0.05425375386608891 0.0 0.0 0.0 0.0 16 0.06346569518856741 0.0 0.0 0.0 0.0 17 0.07186332125602021 0.0 0.0 0.0 0.0 18 0.08250031427479373 0.0 0.0 0.0 0.0 19 0.10087330221631165 0.0 0.0 0.0 0.0 20 0.11537829269645737 0.0 0.0 0.0 0.0 21 0.12520097046020517 0.0 0.0 0.0 0.0 22 0.13344591241734063 0.0 0.0 0.0 0.0 23 0.14062206560225485 0.0 0.0 0.0 0.0 24 0.1488161128559512 0.0 0.0 0.0 0.0 25 0.15762089655091685 0.0 0.0 0.0 0.0 26 0.16622210143212607 0.0 0.0 0.0 0.0 27 0.17477241160989618 0.0 0.0 0.0 0.0 28 0.18632550929057365 0.0 0.0 0.0 0.0 29 0.1953847665027348 0.0 0.0 0.0 0.0 30 0.20378239257018763 0.0 0.0 0.0 0.0 31 0.21167107160324933 0.0 0.0 0.0 0.0 32 0.2199160135603848 0.0 0.0 0.0 0.0 33 0.22693948263498165 0.0 0.0 0.0 0.0 34 0.23615142395746017 0.0 0.0 0.0 0.0 35 0.2564584106296642 0.0 0.0 0.0 0.0 36 0.2840942345970997 0.0 0.0 0.0 0.0 37 0.3057753782621596 0.0 0.0 0.0 0.0 38 0.3231813668383345 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 30 2.528639E-6 44.0 25 TCGCATA 40 8.3182385E-9 44.0 23 ACACGTC 25 4.4439967E-5 44.0 32 CGAACGA 25 4.4439967E-5 44.0 10 GACGTTA 50 2.7284841E-11 44.0 9 CGCATTA 20 7.857848E-4 44.0 15 CGACAAC 20 7.857848E-4 44.0 40 CTCGGTT 50 2.7284841E-11 44.0 18 CGGATAC 20 7.857848E-4 44.0 32 TTGGTCG 20 7.857848E-4 44.0 22 GTATCGC 20 7.857848E-4 44.0 39 CGTACCG 25 4.4439967E-5 44.0 37 CGTAAAG 25 4.4439967E-5 44.0 12 TTACGCC 25 4.4439967E-5 44.0 30 CGATGCG 20 7.857848E-4 44.0 22 ACCGTAC 20 7.857848E-4 44.0 26 ACGTAGT 20 7.857848E-4 44.0 21 CGGTATG 20 7.857848E-4 44.0 14 CCACGTT 30 2.528639E-6 44.0 20 TATCGCC 20 7.857848E-4 44.0 40 >>END_MODULE