##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527484_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1143048 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.014078148949125 31.0 31.0 33.0 28.0 34.0 2 30.276278861430143 31.0 30.0 33.0 26.0 34.0 3 31.61927670579013 31.0 31.0 34.0 30.0 34.0 4 35.71797597301251 37.0 35.0 37.0 35.0 37.0 5 36.02186784806937 37.0 35.0 37.0 35.0 37.0 6 36.0004374269497 37.0 35.0 37.0 35.0 37.0 7 36.27921662082432 37.0 35.0 37.0 35.0 37.0 8 36.43347610948972 37.0 37.0 37.0 35.0 37.0 9 38.28295049726696 39.0 39.0 39.0 37.0 39.0 10 36.080793632463376 39.0 35.0 39.0 31.0 39.0 11 36.446629537867175 38.0 35.0 39.0 31.0 39.0 12 36.69960666568683 39.0 35.0 39.0 33.0 39.0 13 36.661633632183424 39.0 37.0 39.0 32.0 39.0 14 37.48786490156144 40.0 37.0 40.0 33.0 40.0 15 37.60845738761627 40.0 37.0 40.0 33.0 40.0 16 37.667164458535424 40.0 37.0 40.0 33.0 40.0 17 37.76755131892974 40.0 37.0 40.0 33.0 40.0 18 37.63791896753242 40.0 37.0 40.0 33.0 40.0 19 37.5059621293244 40.0 37.0 40.0 33.0 40.0 20 37.47638419383963 39.0 37.0 40.0 32.0 40.0 21 37.50983773209874 40.0 37.0 40.0 33.0 40.0 22 37.48566814342005 39.0 37.0 40.0 33.0 40.0 23 37.324646034112305 39.0 36.0 40.0 33.0 40.0 24 37.16159951288135 39.0 36.0 40.0 33.0 40.0 25 36.973787627466216 39.0 35.0 40.0 32.0 40.0 26 36.78769657967119 39.0 35.0 40.0 32.0 40.0 27 36.709290423499276 39.0 35.0 40.0 31.0 40.0 28 36.50992784205038 39.0 35.0 40.0 31.0 40.0 29 36.4201022179296 38.0 35.0 40.0 31.0 40.0 30 36.207825918071684 38.0 35.0 40.0 30.0 40.0 31 36.00016534738699 38.0 35.0 40.0 30.0 40.0 32 35.81051889334481 38.0 35.0 40.0 30.0 40.0 33 35.64076574212107 38.0 35.0 40.0 29.0 40.0 34 35.28855043707701 38.0 35.0 40.0 27.0 40.0 35 35.04454493599569 38.0 34.0 40.0 25.0 40.0 36 34.762289072724855 38.0 34.0 40.0 24.0 40.0 37 34.33026084643865 38.0 34.0 40.0 21.0 40.0 38 34.01059972984512 38.0 33.0 40.0 20.0 40.0 39 33.653819437154 38.0 33.0 40.0 17.0 40.0 40 33.517994869856736 37.0 33.0 40.0 15.0 40.0 41 33.420600884652266 37.0 33.0 40.0 15.0 40.0 42 33.307637999454094 37.0 33.0 40.0 13.0 40.0 43 33.177386251496 37.0 33.0 40.0 12.0 40.0 44 33.0416133005788 36.0 33.0 40.0 11.0 40.0 45 32.90184576675695 36.0 33.0 40.0 10.0 40.0 46 32.57473614406394 35.0 33.0 40.0 10.0 40.0 47 32.45991244462175 35.0 33.0 40.0 10.0 40.0 48 32.29426848216348 35.0 32.0 39.0 10.0 40.0 49 32.10242701968771 35.0 32.0 39.0 10.0 40.0 50 31.802421245651978 35.0 31.0 39.0 10.0 40.0 51 31.575986310286183 35.0 31.0 39.0 10.0 40.0 52 31.066157326726437 35.0 30.0 38.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 8.0 13 9.0 14 12.0 15 34.0 16 140.0 17 400.0 18 924.0 19 1754.0 20 3003.0 21 4364.0 22 6228.0 23 8909.0 24 12166.0 25 16780.0 26 22829.0 27 29052.0 28 31937.0 29 29368.0 30 26001.0 31 28456.0 32 35809.0 33 47102.0 34 69119.0 35 85230.0 36 134062.0 37 224529.0 38 286134.0 39 38688.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 0.0 0.0 100.0 4 0.0 0.0 100.0 0.0 5 0.0 0.0 100.0 0.0 6 0.0 0.0 0.0 100.0 7 98.9867442137163 0.7585858161686998 0.14233872943218484 0.11233124068280598 8 98.30050881502788 1.3091313750603648 0.2006914845220848 0.18966832538965991 9 92.2502817029556 4.634188590505386 1.3954794549310265 1.7200502516079814 10 41.87663160252238 39.676374045534395 7.056746523330604 11.390247828612623 11 27.69087562377083 33.459837207186396 22.260220043252776 16.589067125789995 12 30.717345203351044 27.18958433941532 24.390314317508977 17.702756139724666 13 23.099817330505807 27.905564770683295 26.624691176573513 22.369926722237388 14 23.786052729194225 31.466395112016293 23.406016195295383 21.341535963494096 15 23.960761052904164 30.173098592535048 23.850441976189977 22.015698378370814 16 25.949478937017517 30.698710815293843 25.115918141670342 18.235892106018294 17 28.81646265073733 29.350298500150473 21.101388568109126 20.731850281003073 18 26.59205912612594 30.718395028030322 21.926113339072376 20.76343250677137 19 26.202924111673347 30.62146121597693 22.012548904332977 21.163065768016743 20 23.69629271911591 31.32309404329477 24.233540498736712 20.747072738852612 21 24.6637061610711 29.038675541184624 26.534581224935437 19.763037072808842 22 22.85529566562384 31.736549996150643 22.152962955186485 23.25519138303903 23 23.574775512489417 32.7988850861906 22.736228049915663 20.890111351404318 24 23.03752773286861 30.583055129793323 24.536939831048215 21.84247730628985 25 23.78316571132621 29.089941979689392 23.8346946060008 23.292197702983604 26 24.00634094106284 29.241904102014963 22.32373443634913 24.428020520573064 27 24.29049348758757 29.109801163205745 22.430816553635545 24.16888879557114 28 26.30536950329295 30.57229442683072 21.689727815454816 21.432608254421513 29 26.701415863550785 31.73243818282347 20.803150873804075 20.76299507982167 30 26.099603866154354 32.71787361510628 20.476392942378624 20.70612957636075 31 26.659072934819882 32.716823790427 21.020639553194616 19.6034637215585 32 25.720617156934793 31.86401620929305 22.847072038969493 19.56829459480267 33 27.002803031893674 32.27659730824952 21.270235370693094 19.45036428916371 34 24.728007922676913 34.71525255282368 21.107775001574737 19.448964522924673 35 24.888018700876955 36.51815146870472 19.936433115669683 18.657396714748636 36 27.37006669886129 35.17630055780685 19.458325459648236 17.995307283683626 37 25.87056711529175 36.12131773993743 20.037741197220065 17.97037394755076 38 27.80119470048502 33.929283809603795 18.63298829095541 19.636533198955775 39 27.00341542962325 32.79521069981313 18.724935435782225 21.476438434781393 40 26.106252755789782 34.5347701933777 20.824322338169527 18.534654712662984 41 24.05279568312092 34.9013339772258 20.819598127112773 20.226272212540504 42 24.12400879053198 34.99441843212184 20.622143602018465 20.25942917532772 43 23.289835597455223 34.6295168706826 20.3023845017882 21.778263030073976 44 24.11814726940601 33.85212169567682 20.751621979129485 21.278109055787684 45 24.675516688712985 34.22375963214143 21.6146653508864 19.486058328259183 46 24.068368082530217 34.56267803276853 19.716844786920586 21.65210909778067 47 24.352258172885126 35.20412091180773 20.062674533352933 20.380946381954214 48 24.514631056613545 35.57103463721559 19.74212806461321 20.17220624155766 49 23.597434228483845 34.99398100517214 20.808312511810527 20.600272254533493 50 21.01749007915678 35.95946976854865 21.42735913102512 21.595681021269446 51 21.910803395832897 36.54597182270561 20.86561544222115 20.677609339240348 52 22.955116495545244 34.47073088794171 21.40916216991762 21.164990446595418 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 20.0 4 40.0 5 102.0 6 164.0 7 287.5 8 411.0 9 1830.5 10 3250.0 11 2998.5 12 2747.0 13 2585.5 14 2575.5 15 2727.0 16 3227.0 17 3727.0 18 4264.5 19 4802.0 20 5734.5 21 6667.0 22 8275.0 23 9883.0 24 12511.5 25 15140.0 26 19120.0 27 23100.0 28 28157.0 29 33214.0 30 39549.0 31 45884.0 32 44372.0 33 42860.0 34 44765.5 35 46671.0 36 46178.5 37 45686.0 38 46560.5 39 47742.0 40 48049.0 41 48837.5 42 49626.0 43 48781.5 44 47937.0 45 49480.5 46 51024.0 47 50454.5 48 49885.0 49 51924.5 50 53964.0 51 57803.0 52 61642.0 53 64267.0 54 66892.0 55 71468.0 56 76044.0 57 69849.5 58 63655.0 59 60687.5 60 57720.0 61 54586.0 62 51452.0 63 46766.0 64 35692.0 65 29304.0 66 23397.5 67 17491.0 68 15410.5 69 13330.0 70 12335.0 71 11340.0 72 9358.0 73 7376.0 74 5971.0 75 4566.0 76 3089.0 77 1612.0 78 1036.5 79 461.0 80 395.5 81 330.0 82 366.5 83 403.0 84 214.5 85 26.0 86 14.5 87 3.0 88 2.5 89 1.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1143048.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.018631769379645 #Duplication Level Percentage of deduplicated Percentage of total 1 80.70772093254153 18.577813090920273 2 7.383750783365225 3.399276807183053 3 2.7166530361530343 1.8760090765312172 4 1.3375120477731215 1.231507892591936 5 0.8439450664142414 0.9713230358687036 6 0.5973650700941352 0.8250315948231937 7 0.49917658639087914 0.8043253421019301 8 0.4000603653184879 0.7367073787831817 9 0.31723619031359235 0.6572108743874482 >10 3.640616314770037 19.58906650002706 >50 0.9396650639900248 15.08175307111259 >100 0.5721685237561719 26.11365367896586 >500 0.03195622074170109 4.888423286556175 >1k 0.01141293597917896 4.316328104801853 >5k 7.608623986119307E-4 0.9315702653455491 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TACTTCGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 5351 0.4681343215682981 No Hit TACTTCGGGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAAAA 5287 0.4625352566121458 No Hit TACTTCGGGGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAAA 4312 0.3772370014207627 No Hit TACTTCGGGAAGCAGTGGTATCAACGCAGAGTGCAGTGCTTACTTCGGGAAG 3630 0.31757196548176453 No Hit TACTTCGGGGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAA 3249 0.2842400319146703 No Hit TACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2217 0.19395510949671405 No Hit TACTTCGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 1938 0.16954668570348752 No Hit TACTTCGGGCAGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAA 1933 0.16910925875378813 No Hit TACTTCGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 1815 0.15878598274088226 No Hit TACTTCGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1802 0.15764867267166383 No Hit TACTTCGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACAG 1695 0.1482877359480967 No Hit TACTTCGGGAGGAGGCTTAAGTACTTTTACATACAAATTTACCCTAGCCAGC 1688 0.14767533821851753 No Hit TACTTCGGGGAGGCATTCAGGCAGCGAGAGCAGAGCAGCGTAGAGCAGCACA 1599 0.13988913851386817 No Hit TACTTCGGGAAGACGCAGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAA 1573 0.13761451837543132 No Hit TACTTCGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 1489 0.13026574562048138 No Hit TACTTCGGGATTCATGAATTTTGTTTTAATTGTGAGCAAATCTGTTGATTTC 1485 0.12991580406072187 No Hit TACTTCGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1410 0.12335439981523086 No Hit TACTTCGGGGCAGAGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAA 1345 0.11766784946913866 No Hit TACTTCGGGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA 1307 0.11434340465142322 No Hit TACTTCGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 1287 0.1125936968526256 No Hit TACTTCGGGTGCAGTGCTTACTTCGGGAAAAAAAAAAAAAAAAAAAAAAAAA 1219 0.10664469033671378 No Hit TACTTCGGGGCAGAGTGCAGTGCTTACTTCGGGAAGAAGGAGAAGAAGAAGC 1208 0.10568235104737508 No Hit TACTTCGGGGCTCTCGGTCTTAGCGCCATCTTCCTTGAGACTCCTGCGCCAT 1204 0.10533240948761557 No Hit TACTTCGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 1184 0.10358270168881797 No Hit TACTTCGGGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAA 1158 0.1013080815503811 Illumina Single End Adapter 2 (97% over 34bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0012247954591583206 0.0 0.0 0.0 0.0 8 0.007873685094589203 0.0 0.0 0.0 0.0 9 0.015309943239479007 0.0 0.0 0.0 0.0 10 0.11180632834316669 0.0 0.0 0.0 0.0 11 0.2335859911394797 0.0 0.0 0.0 0.0 12 0.3261455336958728 0.0 0.0 0.0 0.0 13 0.3947340794087387 0.0 0.0 0.0 0.0 14 0.4690966608576368 0.0 0.0 0.0 0.0 15 0.5605188933448114 0.0 0.0 0.0 0.0 16 0.6425801891084189 0.0 0.0 0.0 0.0 17 0.7083692023432087 0.0 0.0 0.0 0.0 18 0.7698714314709444 0.0 0.0 0.0 0.0 19 0.8405596265423674 0.0 0.0 0.0 0.0 20 0.9150971787711453 0.0 0.0 0.0 0.0 21 0.9811486481757546 0.0 0.0 0.0 0.0 22 1.0624225754299033 0.0 0.0 0.0 0.0 23 1.150870304659122 0.0 0.0 0.0 0.0 24 1.238968092328581 0.0 0.0 0.0 0.0 25 1.3194546510732708 0.0 0.0 0.0 0.0 26 1.4021283445664574 0.0 0.0 0.0 0.0 27 1.5018616890979206 0.0 0.0 0.0 0.0 28 1.6148928129002456 0.0 0.0 0.0 0.0 29 1.6805068553551556 0.0 0.0 0.0 0.0 30 1.7476956348289836 0.0 0.0 0.0 0.0 31 1.791875756748623 0.0 0.0 0.0 0.0 32 1.8366682763978415 0.0 0.0 0.0 0.0 33 1.8833854746257375 0.0 0.0 0.0 0.0 34 1.9436629082943149 0.0 0.0 0.0 0.0 35 2.03464771383179 0.0 0.0 0.0 0.0 36 2.0854767253868602 0.0 0.0 0.0 0.0 37 2.1418173165081433 0.0 0.0 0.0 0.0 38 2.1961457436608085 0.0 0.0 0.0 0.0 39 2.2619347568955983 0.0 0.0 0.0 0.0 40 2.3290360509794863 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 6.3114386E-4 46.000004 46 AACGTTA 20 6.3114386E-4 46.000004 10 CACGGCG 20 6.3114386E-4 46.000004 38 ACGTTAA 20 6.3114386E-4 46.000004 11 CGCGATA 20 6.3114386E-4 46.000004 15 CGATTGA 20 6.3114386E-4 46.000004 22 TAAAACG 20 6.3114386E-4 46.000004 25 ATACTCG 20 6.3114386E-4 46.000004 44 TTATACG 20 6.3114386E-4 46.000004 34 ACGATTA 20 6.3114386E-4 46.000004 30 GATATAC 20 6.3114386E-4 46.000004 9 TACTCGC 20 6.3114386E-4 46.000004 45 CTCGAGT 20 6.3114386E-4 46.000004 35 TTACGCC 20 6.3114386E-4 46.000004 19 TATACGA 20 6.3114386E-4 46.000004 35 TCGACGG 20 6.3114386E-4 46.000004 17 CAATACG 80 0.0 46.000004 25 AGTACGA 20 6.3114386E-4 46.000004 37 ACTATTG 30 1.8613937E-6 46.0 22 CAAAACG 25 3.4171448E-5 46.0 42 >>END_MODULE