##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527475_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 680533 Sequences flagged as poor quality 0 Sequence length 52 %GC 58 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.028570253022263 31.0 31.0 33.0 30.0 34.0 2 31.27176786430636 31.0 31.0 34.0 30.0 34.0 3 31.66914462634435 33.0 31.0 34.0 30.0 34.0 4 35.75910793451603 37.0 35.0 37.0 33.0 37.0 5 34.118069219273714 35.0 35.0 37.0 30.0 37.0 6 35.583270759830896 36.0 35.0 37.0 35.0 37.0 7 36.03285219085628 37.0 35.0 37.0 35.0 37.0 8 36.40110325289148 37.0 37.0 37.0 35.0 37.0 9 38.545930910036695 39.0 39.0 39.0 37.0 39.0 10 37.17218268621801 39.0 37.0 39.0 34.0 39.0 11 36.879855936449815 39.0 37.0 39.0 32.0 39.0 12 36.671774917601354 39.0 35.0 39.0 32.0 39.0 13 36.678582816703965 39.0 35.0 39.0 33.0 39.0 14 37.51526377119111 39.0 37.0 40.0 33.0 40.0 15 37.59307924817753 40.0 37.0 40.0 33.0 40.0 16 37.65349365864697 40.0 37.0 40.0 33.0 40.0 17 37.574073557050134 39.0 37.0 40.0 33.0 40.0 18 37.46351609694166 39.0 36.0 40.0 33.0 40.0 19 37.30720185501658 39.0 36.0 40.0 32.0 40.0 20 37.14316278564008 39.0 36.0 40.0 32.0 40.0 21 37.20872757088929 39.0 36.0 40.0 32.0 40.0 22 37.158763792497936 39.0 36.0 40.0 32.0 40.0 23 37.079195277819004 39.0 36.0 40.0 32.0 40.0 24 37.01764205409583 39.0 35.0 40.0 32.0 40.0 25 37.007752746744096 39.0 35.0 40.0 32.0 40.0 26 36.8674098096639 39.0 35.0 40.0 32.0 40.0 27 36.78033247469263 38.0 35.0 40.0 31.0 40.0 28 36.562786815628336 38.0 35.0 40.0 31.0 40.0 29 36.51066002677313 38.0 35.0 40.0 31.0 40.0 30 36.354813065641196 38.0 35.0 40.0 31.0 40.0 31 36.29463376500478 38.0 35.0 40.0 31.0 40.0 32 36.1426528911897 38.0 35.0 40.0 30.0 40.0 33 35.88893852318697 38.0 34.0 40.0 30.0 40.0 34 35.51645254528436 38.0 34.0 40.0 29.0 40.0 35 35.502650128649165 38.0 34.0 40.0 29.0 40.0 36 35.2900976146638 37.0 34.0 40.0 29.0 40.0 37 35.23439862578303 37.0 34.0 39.0 29.0 40.0 38 35.093337134275636 37.0 33.0 39.0 28.0 40.0 39 34.91622595818278 36.0 33.0 39.0 28.0 40.0 40 35.1873340455202 37.0 34.0 39.0 29.0 40.0 41 35.32518334893385 37.0 34.0 40.0 30.0 40.0 42 35.36702261315763 36.0 34.0 40.0 30.0 40.0 43 35.322363500373974 36.0 34.0 40.0 30.0 40.0 44 35.21071424897838 36.0 34.0 39.0 30.0 40.0 45 35.08393127151806 35.0 34.0 39.0 30.0 40.0 46 34.75649527649651 35.0 34.0 39.0 29.0 40.0 47 34.7130352238613 35.0 34.0 39.0 29.0 40.0 48 34.53400349431989 35.0 33.0 39.0 29.0 40.0 49 34.367076982306514 35.0 33.0 38.0 29.0 40.0 50 34.204172317874374 35.0 33.0 38.0 28.0 40.0 51 34.06691960566203 35.0 33.0 38.0 28.0 40.0 52 33.57669650112485 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 3.0 14 16.0 15 27.0 16 45.0 17 73.0 18 146.0 19 239.0 20 463.0 21 727.0 22 1164.0 23 1685.0 24 2304.0 25 3330.0 26 4442.0 27 5969.0 28 7947.0 29 10764.0 30 14060.0 31 18324.0 32 25607.0 33 37712.0 34 61660.0 35 73648.0 36 111691.0 37 145460.0 38 141915.0 39 11108.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 0.0 100.0 0.0 2 0.0 0.0 100.0 0.0 3 100.0 0.0 0.0 0.0 4 100.0 0.0 0.0 0.0 5 0.0 100.0 0.0 0.0 6 0.0 0.0 0.0 100.0 7 99.24441577410647 0.6037914399448668 0.0881661873854758 0.06362659856318503 8 99.49363219711609 0.3675060577517916 0.08875396196804564 0.05010778316407874 9 98.2609219538215 1.1025181732553748 0.16854436155190122 0.468015511371234 10 64.65358770258018 26.036944571387426 4.014941229888926 5.2945264961434635 11 34.172185625090925 25.216852085056864 20.581073952328545 20.029888337523676 12 29.142451578395168 16.409931627121683 27.75001359228722 26.697603202195925 13 23.083818124910916 17.865261493564603 29.500700186471484 29.550220195052994 14 24.91091541482926 17.874812830531365 30.930461858572617 26.283809896066764 15 25.239922237422725 18.958081386207574 26.909055108275425 28.892941268094276 16 31.157048960153293 18.021609532528178 24.586904676187636 26.234436831130893 17 31.216120305701562 20.469396781640274 22.29605324062169 26.018429672036476 18 29.682175588839925 20.542427773524576 22.403909876523254 27.371486761112244 19 31.10429619136765 19.084746808751376 21.87021055554984 27.940746444331133 20 30.68447819576714 20.02518614086312 22.812119324118008 26.47821633925173 21 31.913661791566316 18.352379678869358 24.523718908561378 25.21023962100295 22 32.30232773429062 17.82088451258058 23.786355694727515 26.09043205840128 23 31.815356492631512 18.932954022802715 22.79610246674298 26.455587017822797 24 30.23394897822736 19.53130854785881 23.106153559048572 27.128588914865258 25 27.590579736765154 20.269553423566528 23.54698449597595 28.592882343692374 26 28.19628144410337 21.955731757313753 22.146611553003307 27.70137524557957 27 29.178011940640648 18.938390937691484 21.820984434259614 30.06261268740825 28 29.56197568670439 20.443240812715917 21.135051496400614 28.85973200417908 29 29.909056577711883 19.808003432603563 21.404693086154527 28.878246903530027 30 28.36644218575734 20.143328831959657 22.45519320885247 29.035035773430533 31 33.64451099358885 20.05295848988954 20.24339745464217 26.059133061879436 32 34.14514799429271 19.203624218076126 21.30271419607866 25.348513591552503 33 32.17992367747045 19.400675646882664 22.243447415481686 26.175953260165198 34 28.67458301066958 23.314519648569576 24.180164665049304 23.830732675711538 35 31.213181432788712 23.409886074591533 22.811384605889796 22.565547886729963 36 30.391913397293003 24.12844050178316 20.55903240548217 24.920613695441663 37 31.09900622012452 23.087932546988903 20.438244728764072 25.374816504122506 38 32.03650667932341 23.60443946142215 21.312412476691065 23.046641382563372 39 32.33656560372531 20.869230441433405 21.408660564586874 25.385543390254405 40 29.54066885808623 20.920366830116983 22.124276118865655 27.41468819293113 41 28.276365730978515 22.307808732273084 21.80966977354515 27.606155763203255 42 27.592343060512864 19.179084629253833 23.427960143005556 29.800612167227747 43 27.144605772240286 18.503143859298522 25.849885310484577 28.502365057976615 44 26.876286675297155 19.210824456712604 25.077402565342165 28.83548630264807 45 28.203922513676783 18.813048007958468 25.169830118451276 27.813199359913483 46 28.74937732630159 19.513969197673 23.612962192869414 28.123691283156 47 27.728412876377778 20.374030355618316 24.567067284025903 27.330489483978 48 28.352335595775664 20.67585260376793 24.946916608011662 26.024895192444745 49 28.199661147953147 19.699999853056354 24.98188919567457 27.11844980331593 50 25.427863160199433 22.243153528190405 24.532535527299927 27.796447784310242 51 26.947113512496824 21.4627358261833 24.03395573763506 27.556194923684817 52 28.89867207027433 20.0791144588139 23.42413960821885 27.598073862692917 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.0 4 0.0 5 2.5 6 5.0 7 3.5 8 2.0 9 35.5 10 69.0 11 71.5 12 74.0 13 79.0 14 126.0 15 168.0 16 207.5 17 247.0 18 312.5 19 378.0 20 345.5 21 313.0 22 499.5 23 686.0 24 744.5 25 803.0 26 1312.5 27 1822.0 28 2002.0 29 2182.0 30 2564.0 31 2946.0 32 3267.0 33 3588.0 34 4517.0 35 5446.0 36 5514.5 37 5583.0 38 6957.5 39 9207.0 40 10082.0 41 10697.5 42 11313.0 43 12432.5 44 13552.0 45 16080.5 46 18609.0 47 19036.5 48 19464.0 49 23665.0 50 27866.0 51 29370.0 52 30874.0 53 35067.0 54 39260.0 55 41596.0 56 43932.0 57 51599.5 58 59267.0 59 63696.5 60 68126.0 61 65664.5 62 63203.0 63 64006.5 64 59200.5 65 53591.0 66 45821.0 67 38051.0 68 33276.5 69 28502.0 70 22893.0 71 17284.0 72 16305.0 73 15326.0 74 14821.0 75 14316.0 76 10785.0 77 7254.0 78 4597.0 79 1940.0 80 1333.5 81 727.0 82 491.0 83 255.0 84 176.5 85 98.0 86 85.0 87 72.0 88 49.5 89 15.5 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 680533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.32798262538334 #Duplication Level Percentage of deduplicated Percentage of total 1 68.37586641461878 6.378088939110961 2 10.464713295526149 1.952293276005719 3 3.848456206679269 1.0769499789135868 4 1.7674858223062382 0.6594830816433589 5 0.9499054820415879 0.4430350916120158 6 0.5923125393824826 0.331504864569389 7 0.4206049149338374 0.27463767370575715 8 0.3056080655324512 0.22805653803709738 9 0.24732199117832387 0.20763137129279552 >10 7.038437303087587 19.04668840452998 >50 4.0879017013232515 26.711562848531962 >100 1.7785129174543164 30.088474769041323 >500 0.08506616257088848 5.073376309451563 >1k 0.03780718336483932 7.528216853554494 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TTGGACGGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCG 4296 0.6312699016800067 No Hit TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3936 0.5783701892487212 No Hit TTGGACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 3424 0.5031350426797819 No Hit TTGGACGGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAG 2909 0.42745906517391513 No Hit TTGGACGGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAA 2719 0.3995397725018478 No Hit TTGGACGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 2697 0.3963070122977137 No Hit TTGGACGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 2621 0.3851392952288868 No Hit TTGGACGGGAGTGACGAGAGGCTTTGTCCGGTTCGGCGGTCTTTCTGTGAGG 2566 0.3770573947185515 No Hit TTGGACGGGAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTTCGC 2098 0.30828776855788037 No Hit TTGGACGGGAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGAAG 2094 0.3076999939753105 No Hit TTGGACGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAG 1992 0.2927117421197797 No Hit TTGGACGGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCG 1982 0.29124230566335507 No Hit TTGGACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 1894 0.2783112648468186 No Hit TTGGACGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 1893 0.2781643212011761 No Hit TTGGACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 1805 0.26523328038463967 No Hit TTGGACGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 1634 0.2401059169797791 No Hit TTGGACGGGGAGATGCGCCACGGCTTCGGTAGCGACCGGCTGTCTTCTGCTG 1626 0.23893036781463942 No Hit TTGGACGGGGCTCTCAGCTCCTGAAGGCAAATCCCAATTCCAGAGCAAGGAA 1506 0.22129713033754425 No Hit TTGGACGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTCT 1499 0.22026852481804704 No Hit TTGGACGGGGACAATCCGCAGCGGCTTCTGAGCAGATCAGACTCTCCTCGTT 1403 0.2061619348363709 No Hit TTGGACGGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCG 1383 0.20322306192352171 No Hit TTGGACGGGGAGTCCGGAGTAGGCGAGCGAGCGAGGCAGAGGTTTTTGGTCG 1122 0.16487077041083972 No Hit TTGGACGGGGACGGCAGTGGTGCTGGGAGTCTCGTGTCCGTGGTGCCGTTAC 1077 0.15825830635692906 No Hit TTGGACGGGAGTCCGAGTGGAGCGAGCGAGTCGAGCGGTTGTCTGGTCGCGT 1056 0.1551724897984374 No Hit TTGGACGGGGCTCATCAGACCCCAGAAAAGGTGTTGGTTGATATAGACAGCA 905 0.132983999306426 No Hit TTGGACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 893 0.13122067555871647 No Hit TTGGACGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCAT 854 0.12548987337866055 No Hit TTGGACGGGACTATATATAATTATTTCTAAAGCACAGATTAAGTAAGTTCTG 845 0.1241673805678784 No Hit TTGGACGGGATGTATATGTGTGCATTTGTCAGTACTGTGTGTGTGTCTTTGT 832 0.12225711317452645 No Hit TTGGACGGGGCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTCCT 802 0.11784880380525264 No Hit TTGGACGGGACTCTGGGGTGGTGCTTAGCCGGCGCCAGACCGACCCTCGGCT 797 0.11711408557704035 No Hit TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 793 0.11652631099447051 No Hit TTGGACGGGGAGAAACCAGTTCTCGCCGGAGCTTGGGGAAGGAAGTCTCTCT 790 0.11608548005754313 No Hit TTGGACGGGGGCGGCAGCACTCCAGTCCATAGCTTGCAGCAGCCAGGTTCCA 773 0.11358743808162132 No Hit TTGGACGGGGAGAGTGTGGCCAGGCGGCTCGGACCGAGCAGGGCTTTCCTTG 768 0.11285271985340903 No Hit TTGGACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTT 727 0.10682803038206817 No Hit TTGGACGGGGCGAACGGCGAGCAGCGGCGGCGGCGCGGGAAGTGCAGCGGAG 711 0.10447693205178882 No Hit TTGGACGGGGAGACCGCACTCGGACCTGCTCCGCTCCTGCACCGCGGCCAAG 701 0.10300749559536422 No Hit TTGGACGGGGTCTCTTGCTGCAGCAACGAGAGTGGGAGCACCTGGAGCGCGA 700 0.10286055194972175 No Hit TTGGACGGGGGCAAGCTCCGTTGGGCGCCTTGGATCCATTTCCATCTGGTTC 694 0.10197889007586701 No Hit TTGGACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 692 0.10168500278458209 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.005583858534413467 0.0 0.0 0.0 0.0 8 0.005583858534413467 0.0 0.0 0.0 0.0 9 0.005583858534413467 0.0 0.0 0.0 0.0 10 0.011314660714469394 0.0 0.0 0.0 0.0 11 0.01733935018581024 0.0 0.0 0.0 0.0 12 0.025274307050503063 0.0 0.0 0.0 0.0 13 0.03320926391519588 0.0 0.0 0.0 0.0 14 0.040409502551676406 0.0 0.0 0.0 0.0 15 0.04775668483379939 0.0 0.0 0.0 0.0 16 0.05583858534413467 0.0 0.0 0.0 0.0 17 0.06098161294162076 0.0 0.0 0.0 0.0 18 0.0684757388693862 0.0 0.0 0.0 0.0 19 0.0761168084427941 0.0 0.0 0.0 0.0 20 0.08155372333156512 0.0 0.0 0.0 0.0 21 0.08625591999212381 0.0 0.0 0.0 0.0 22 0.09007645477882777 0.0 0.0 0.0 0.0 23 0.09551336966759878 0.0 0.0 0.0 0.0 24 0.10050945361944241 0.0 0.0 0.0 0.0 25 0.10550553757128604 0.0 0.0 0.0 0.0 26 0.11226494527083918 0.0 0.0 0.0 0.0 27 0.11667325464011297 0.0 0.0 0.0 0.0 28 0.12416738056787842 0.0 0.0 0.0 0.0 29 0.12945735181100695 0.0 0.0 0.0 0.0 30 0.1376861959669847 0.0 0.0 0.0 0.0 31 0.14385782908396802 0.0 0.0 0.0 0.0 32 0.15429082792458265 0.0 0.0 0.0 0.0 33 0.15972774281335364 0.0 0.0 0.0 0.0 34 0.1664871505129068 0.0 0.0 0.0 0.0 35 0.17530376925145438 0.0 0.0 0.0 0.0 36 0.18279789517921982 0.0 0.0 0.0 0.0 37 0.1908797956895551 0.0 0.0 0.0 0.0 38 0.198520865262963 0.0 0.0 0.0 0.0 39 0.20601499119072844 0.0 0.0 0.0 0.0 40 0.21189273701642683 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTAGT 35 1.0187432E-7 46.000004 40 GACCGTT 35 1.0187432E-7 46.000004 9 GGCGTAA 35 1.0187432E-7 46.000004 34 GTCTATG 35 1.0187432E-7 46.000004 10 TATTGGA 35 1.0187432E-7 46.000004 44 AACGCAC 35 1.0187432E-7 46.000004 36 CTCATAA 75 0.0 46.000004 37 TCGTACC 35 1.0187432E-7 46.000004 38 ACGTCTA 35 1.0187432E-7 46.000004 23 CATCGAA 35 1.0187432E-7 46.000004 25 GCAATCT 35 1.0187432E-7 46.000004 24 GCGTAAC 35 1.0187432E-7 46.000004 35 TTCTATC 20 6.30963E-4 46.0 44 GTTGACG 20 6.30963E-4 46.0 28 GCCTTAT 20 6.30963E-4 46.0 20 TCGCAAT 20 6.30963E-4 46.0 43 TACCCAC 30 1.860275E-6 46.0 29 CGAACAC 20 6.30963E-4 46.0 32 CGAACAA 20 6.30963E-4 46.0 25 CGTATAT 55 1.8189894E-12 46.0 40 >>END_MODULE