##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527456_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3187870 Sequences flagged as poor quality 0 Sequence length 50 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.92227192451386 31.0 31.0 33.0 28.0 34.0 2 31.609994761392404 31.0 31.0 34.0 30.0 34.0 3 32.17942889766521 33.0 31.0 34.0 31.0 34.0 4 36.12946669719907 37.0 35.0 37.0 35.0 37.0 5 36.290154240919485 37.0 37.0 37.0 35.0 37.0 6 36.25294224670391 37.0 37.0 37.0 35.0 37.0 7 36.634726008275116 37.0 37.0 37.0 35.0 37.0 8 36.69100120142917 37.0 37.0 37.0 35.0 37.0 9 38.410198031914724 39.0 39.0 39.0 37.0 39.0 10 37.16503558802586 39.0 37.0 39.0 34.0 39.0 11 35.90887551876331 37.0 35.0 39.0 33.0 39.0 12 35.99145197263376 37.0 35.0 39.0 33.0 39.0 13 36.03869354772936 37.0 35.0 39.0 33.0 39.0 14 36.65569486836038 39.0 35.0 40.0 33.0 40.0 15 36.79112604968208 39.0 35.0 40.0 33.0 40.0 16 36.95900679764231 39.0 35.0 40.0 33.0 40.0 17 36.846636782553865 38.0 35.0 40.0 33.0 40.0 18 36.7402839513531 38.0 35.0 40.0 33.0 40.0 19 36.67072026149121 38.0 35.0 40.0 33.0 40.0 20 36.49833682051025 38.0 35.0 40.0 32.0 40.0 21 36.38755093526399 38.0 35.0 40.0 32.0 40.0 22 36.227174571108606 38.0 35.0 40.0 32.0 40.0 23 36.063855489715706 37.0 34.0 40.0 32.0 40.0 24 35.939188549093906 37.0 34.0 39.0 32.0 40.0 25 35.68353257817916 36.0 34.0 39.0 31.0 40.0 26 35.15175493354497 36.0 34.0 38.0 30.0 40.0 27 35.05779815362609 36.0 34.0 38.0 30.0 40.0 28 34.86503809753848 35.0 34.0 38.0 30.0 40.0 29 34.50447351993651 35.0 33.0 38.0 30.0 39.0 30 34.136828038784515 35.0 33.0 38.0 29.0 39.0 31 33.94305445328699 35.0 33.0 38.0 29.0 39.0 32 33.84106629191278 35.0 33.0 38.0 28.0 39.0 33 33.24192862318727 34.0 32.0 37.0 26.0 39.0 34 32.46702500415638 34.0 31.0 37.0 23.0 38.0 35 32.320254903744505 34.0 31.0 36.0 23.0 38.0 36 32.142908901554954 34.0 31.0 36.0 23.0 38.0 37 32.01742229137324 34.0 31.0 36.0 24.0 38.0 38 31.50491707629232 33.0 30.0 35.0 23.0 38.0 39 30.779639069347244 33.0 29.0 35.0 22.0 38.0 40 30.56528748035522 32.0 29.0 34.0 21.0 37.0 41 30.203253269424412 32.0 28.0 34.0 21.0 37.0 42 29.768277250954398 32.0 27.0 34.0 21.0 36.0 43 29.151085521053243 31.0 27.0 34.0 19.0 36.0 44 28.499584989350257 30.0 26.0 34.0 18.0 36.0 45 27.96091465461264 30.0 23.0 33.0 18.0 35.0 46 27.976599735873798 30.0 23.0 33.0 19.0 35.0 47 27.51368594076923 29.0 23.0 33.0 18.0 35.0 48 27.09227258326092 29.0 23.0 32.0 18.0 34.0 49 26.878957736670568 29.0 23.0 32.0 18.0 34.0 50 30.343921489897642 32.0 29.0 34.0 22.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 12.0 13 27.0 14 90.0 15 263.0 16 514.0 17 891.0 18 1765.0 19 2773.0 20 4379.0 21 6726.0 22 9987.0 23 14221.0 24 19522.0 25 26875.0 26 36169.0 27 49547.0 28 67012.0 29 93209.0 30 131244.0 31 200026.0 32 351566.0 33 472695.0 34 444069.0 35 667773.0 36 521296.0 37 63731.0 38 1485.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.53025060620413 0.35001427285303355 0.0696703441482871 0.05006477679453679 8 99.21922788570426 0.6063296182090235 0.10778356708397771 0.06665892900275106 9 93.47730616367669 3.2736278455520456 2.0085825331647778 1.2404834576064896 10 57.04103366824871 29.77997848092927 5.007199164332297 8.171788686489725 11 43.50889465379705 20.403090464793106 19.48391872943376 16.604096151976083 12 38.02084150231973 15.483253708589121 22.890644850636946 23.605259938454203 13 27.57066630696986 15.399373249222837 25.51989259285981 31.5100678509475 14 23.43194672304705 17.67339947990351 31.97846838170942 26.91618541534002 15 29.404116228077054 18.01836335860622 28.027272128411763 24.550248284904967 16 37.23536405185908 18.80384080906687 22.417444876986828 21.543350262087223 17 33.08070906279114 20.11496704696239 24.43923372032109 22.365090169925374 18 33.144387945556126 20.36776907464859 22.790107501246915 23.697735478548374 19 29.863074717601407 26.021638272576986 20.6640170395907 23.451269970230907 20 32.79823204835831 25.38252814575249 20.288374369092843 21.530865436796358 21 30.18401001295536 25.792802090424015 22.288204976990905 21.734982919629722 22 26.76075247735949 22.20297565459068 28.121441589525293 22.91483027852453 23 30.904961620141346 20.265976968947918 26.28247074065128 22.54659067025945 24 34.541935524346975 21.010517994773938 20.45092804913626 23.996618431742824 25 30.315947639019157 20.61489333002914 20.100882407375458 28.968276623576244 26 24.556522066458168 20.475552641732566 25.56214651162061 29.40577878018865 27 24.142201532684833 18.744428097758064 24.762898110650685 32.350472258906414 28 25.153064585444202 25.36552619774332 20.68393629602211 28.797472920790373 29 31.038875487394403 24.24935772161349 19.587718445231456 25.124048345760645 30 29.621753710157567 19.96345522245261 26.085285786434202 24.329505280955622 31 33.75645807388633 19.324909735967903 23.863677000630513 23.054955189515255 32 37.82764039938893 19.570402808144625 20.59679347024816 22.005163322218284 33 37.3350858096472 19.56648169467387 21.77450774341488 21.323924752264052 34 29.297618786211483 21.193304620326426 29.432191400527625 20.07688519293447 35 26.409452079288055 28.74681213474828 25.59348405047885 19.25025173548482 36 26.55214924071559 30.78770464291204 20.81085489684335 21.849291219529025 37 31.599908402789325 27.593659716362335 18.752082111252967 22.054349769595373 38 31.21874480452465 27.842258310407892 19.259881990168985 21.679114894898476 39 32.87533682364714 24.044299171547145 19.30094389043468 23.77942011437104 40 29.903321026265182 21.654082506501208 19.544052925621184 28.898543541612426 41 24.87118358025892 25.899550483551714 20.121146721792293 29.10811921439707 42 23.203110540894077 23.577655299620123 21.32370516990969 31.89552898957611 43 24.065849611182387 20.15091581526223 22.972768651168334 32.81046592238705 44 26.15203882216025 18.972981959741144 22.407187244147348 32.46779197395126 45 30.505635424280165 20.35898578047411 21.74433085414399 27.391047941101736 46 27.37988060993704 26.279302480966916 20.883662131768236 25.457154777327805 47 25.08276686314059 22.73380031180694 23.512972611806628 28.670460213245835 48 25.686963395621525 21.516906272840487 27.079805638247485 25.716324693290503 49 30.90000533271432 20.003576055485325 23.927857785919752 25.168560825880604 50 26.149027407014714 19.98484881754902 23.994265763660376 29.87185801177589 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.0 4 8.0 5 18.5 6 29.0 7 285.0 8 541.0 9 1388.0 10 2235.0 11 2563.0 12 2891.0 13 3439.5 14 3988.0 15 4045.5 16 4103.0 17 4862.5 18 5622.0 19 5975.5 20 6329.0 21 7617.0 22 8905.0 23 10903.5 24 12902.0 25 13623.0 26 14344.0 27 16842.5 28 19341.0 29 21703.0 30 24065.0 31 26681.5 32 29298.0 33 34465.5 34 39633.0 35 41981.0 36 44329.0 37 49930.0 38 55531.0 39 59600.5 40 63670.0 41 70005.0 42 76340.0 43 83546.5 44 90753.0 45 97486.0 46 104219.0 47 118926.5 48 133634.0 49 137434.0 50 141234.0 51 150386.0 52 159538.0 53 175598.5 54 191659.0 55 218132.0 56 244605.0 57 293679.0 58 342753.0 59 349327.0 60 355901.0 61 372164.0 62 388427.0 63 301286.0 64 214145.0 65 173928.5 66 133712.0 67 108869.5 68 84027.0 69 77152.0 70 70277.0 71 57017.5 72 43758.0 73 44902.0 74 46046.0 75 32359.0 76 18672.0 77 12496.5 78 6321.0 79 4886.0 80 3451.0 81 1970.5 82 490.0 83 296.5 84 103.0 85 64.5 86 26.0 87 19.0 88 12.0 89 6.0 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3187870.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 11.17531212274907 #Duplication Level Percentage of deduplicated Percentage of total 1 72.92029174747684 8.149070203599768 2 9.306230067498321 2.080000513808118 3 3.3222723300948727 1.113822907367491 4 1.5006641557434945 0.670815613274211 5 0.8204171513590325 0.4584208868646928 6 0.5492817355734788 0.3683036903015368 7 0.3877769648926648 0.30334700316814867 8 0.3442896880748508 0.30780357799043007 9 0.30030335525900387 0.30203853538753495 >10 6.834804421920318 21.046173224942084 >50 2.38301705830295 18.229394919009266 >100 1.230528131996853 26.641796441023725 >500 0.060073915084419574 4.569493867771559 >1k 0.03581871932263515 7.735719612235268 >5k 0.0028203716002074917 1.985699093403661 >10k+ 0.0014101858001037458 6.038099909852535 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 79750 2.5016703943385394 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 42281 1.3263087892542669 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGT 29255 0.9176973966943445 No Hit AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGC 26601 0.8344443154833792 No Hit AAAACGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACT 13686 0.4293148716854828 No Hit AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCC 8633 0.2708077807438823 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGC 7743 0.24288945283214183 No Hit AAAACGGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGC 7617 0.23893697045362575 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTG 6929 0.21735516191061743 No Hit AAAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5955 0.18680184574653294 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGC 5893 0.18485697346504093 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTG 5097 0.1598873228833045 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCA 5075 0.1591972069124525 No Hit AAAACGGGGGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCT 5033 0.1578797127862805 No Hit AAAACGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGAC 5026 0.15766013043191848 No Hit AAAACGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 4963 0.15568388924266047 No Hit AAAACGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCG 4839 0.1517941446796764 No Hit AAAACGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGA 4832 0.15157456232531438 No Hit AAAACGGGGGGGCAGTGGTGGCGCACGCCTTTCGTCCCAGCACTTGGGAG 4770 0.14962969004382237 No Hit AAAACGGGGGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAG 4505 0.14131692948583224 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAG 4459 0.13987395972859623 No Hit AAAACGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 4374 0.13720760256848616 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGC 4369 0.13705075802965616 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGC 4044 0.126855863005706 No Hit AAAACGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG 4028 0.12635396048145 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTG 3944 0.12371897222910595 No Hit AAAACGGGGGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGG 3842 0.12051934363697389 No Hit AAAACGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGC 3726 0.11688055033611784 No Hit AAAACGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC 3591 0.11264574778770778 No Hit AAAACGGGGAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTG 3478 0.10910106121014972 No Hit AAAACGGGGGGGGACTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTG 3446 0.1080972561616377 No Hit AAAACGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 3402 0.10671702421993369 No Hit AAAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCA 3378 0.10596417043354966 No Hit AAAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 3328 0.10439572504524965 No Hit AAAACGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAA 3273 0.10267043511811962 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 5.019025242560079E-4 0.0 0.0 0.0 0.0 8 0.0012547563106400199 0.0 0.0 0.0 0.0 9 0.004956287427028078 0.0 0.0 0.0 0.0 10 0.019448722814920306 0.0 0.0 0.0 0.0 11 0.036576146455156576 0.0 0.0 0.0 0.0 12 0.05502106422156487 0.0 0.0 0.0 0.0 13 0.06687851135711306 0.0 0.0 0.0 0.0 14 0.08143368456053729 0.0 0.0 0.0 0.0 15 0.09674171155034553 0.0 0.0 0.0 0.0 16 0.11079498222951376 0.0 0.0 0.0 0.0 17 0.12349938987474395 0.0 0.0 0.0 0.0 18 0.13403934288412012 0.0 0.0 0.0 0.0 19 0.15398996822329644 0.0 0.0 0.0 0.0 20 0.1713683431256607 0.0 0.0 0.0 0.0 21 0.18448054657184892 0.0 0.0 0.0 0.0 22 0.19850244834325115 0.0 0.0 0.0 0.0 23 0.21428100894954938 0.0 0.0 0.0 0.0 24 0.23009093846361364 0.0 0.0 0.0 0.0 25 0.2456499167155499 0.0 0.0 0.0 0.0 26 0.26243228237036015 0.0 0.0 0.0 0.0 27 0.27962244382612844 0.0 0.0 0.0 0.0 28 0.3016120481700948 0.0 0.0 0.0 0.0 29 0.316418172635647 0.0 0.0 0.0 0.0 30 0.33097334583907123 0.0 0.0 0.0 0.0 31 0.3421720459115334 0.0 0.0 0.0 0.0 32 0.3534648527072936 0.0 0.0 0.0 0.0 33 0.36350290319241374 0.0 0.0 0.0 0.0 34 0.37463886544934394 0.0 0.0 0.0 0.0 35 0.3930837832157522 0.0 0.0 0.0 0.0 36 0.4159517169771666 0.0 0.0 0.0 0.0 37 0.4347730616367669 0.0 0.0 0.0 0.0 38 0.4473519936509331 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAAACGG 324625 0.0 43.000385 1 CGGGGAT 24900 0.0 42.992767 5 AAACGGG 322230 0.0 42.99091 2 AACGGGG 301400 0.0 42.986862 3 ACGGGGG 173495 0.0 42.95259 4 CGGGGGA 33735 0.0 42.80006 5 CGGGGGG 90890 0.0 42.782486 5 ACGGGGC 24695 0.0 42.619152 4 AACGGGT 6510 0.0 42.479263 3 ACGGGGA 91740 0.0 42.441246 4 ACGGGTA 2255 0.0 42.341465 4 CGGGGAG 33790 0.0 42.248592 5 CGGGGGT 23000 0.0 42.067825 5 ACGGGGT 13275 0.0 42.044445 4 CGGGGCA 8615 0.0 41.829365 5 ACGGGAT 2295 0.0 41.795208 4 AACGGGC 3905 0.0 41.74648 3 CGGGGGC 27725 0.0 41.555992 5 AACGGGA 11050 0.0 41.371944 3 ACGGGAG 4940 0.0 41.2834 4 >>END_MODULE