##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1527454_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3504002 Sequences flagged as poor quality 0 Sequence length 52 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.566547336445584 31.0 31.0 33.0 28.0 34.0 2 31.42230426809117 31.0 31.0 34.0 30.0 34.0 3 31.965621024188913 31.0 31.0 34.0 30.0 34.0 4 35.98300257819488 37.0 35.0 37.0 35.0 37.0 5 36.110978247158535 37.0 35.0 37.0 35.0 37.0 6 36.02332589992814 37.0 35.0 37.0 35.0 37.0 7 36.51384103091265 37.0 37.0 37.0 35.0 37.0 8 36.56763095454854 37.0 37.0 37.0 35.0 37.0 9 38.37366474105894 39.0 39.0 39.0 37.0 39.0 10 36.882057430332516 39.0 37.0 39.0 32.0 39.0 11 35.64661036152376 37.0 35.0 39.0 31.0 39.0 12 35.723202783560055 37.0 35.0 39.0 31.0 39.0 13 35.810124252212184 37.0 35.0 39.0 31.0 39.0 14 36.402312270369706 38.0 35.0 40.0 31.0 40.0 15 36.61701191951374 38.0 35.0 40.0 32.0 40.0 16 36.75594192012448 39.0 35.0 40.0 33.0 40.0 17 36.535549351855394 38.0 35.0 40.0 31.0 40.0 18 36.506101309302906 38.0 35.0 40.0 31.0 40.0 19 36.29870131352665 38.0 34.0 40.0 31.0 40.0 20 36.11605644060705 38.0 34.0 40.0 30.0 40.0 21 36.18512717743882 38.0 34.0 40.0 31.0 40.0 22 36.26324357120801 38.0 34.0 40.0 31.0 40.0 23 36.33163508468317 38.0 35.0 40.0 31.0 40.0 24 36.35580316449591 38.0 35.0 40.0 32.0 40.0 25 36.354548599001944 38.0 35.0 40.0 32.0 40.0 26 36.26757005275682 38.0 35.0 40.0 32.0 40.0 27 36.199842351688154 38.0 35.0 40.0 32.0 40.0 28 35.93666299277226 37.0 34.0 40.0 31.0 40.0 29 35.83664649734789 37.0 34.0 40.0 31.0 40.0 30 35.7081017647821 37.0 34.0 40.0 31.0 40.0 31 35.626946274574046 37.0 34.0 40.0 31.0 40.0 32 35.57513294798348 36.0 34.0 40.0 31.0 40.0 33 35.38280115136921 36.0 34.0 40.0 30.0 40.0 34 34.55145088387506 36.0 33.0 40.0 25.0 40.0 35 34.51353138497067 35.0 33.0 39.0 26.0 40.0 36 34.68531096728826 35.0 33.0 39.0 28.0 40.0 37 34.76097587843842 35.0 34.0 39.0 29.0 40.0 38 34.63842600546461 35.0 34.0 39.0 29.0 40.0 39 34.507504847314586 35.0 33.0 39.0 29.0 40.0 40 34.686954801966436 35.0 34.0 39.0 29.0 40.0 41 34.73593993382424 35.0 34.0 39.0 29.0 40.0 42 34.7724319221279 35.0 34.0 39.0 30.0 40.0 43 34.753391693269585 35.0 34.0 39.0 30.0 40.0 44 34.633615220539255 35.0 34.0 39.0 30.0 40.0 45 34.512565917485205 35.0 34.0 39.0 29.0 40.0 46 34.26602781619417 35.0 33.0 39.0 29.0 40.0 47 34.18184064963433 35.0 33.0 38.0 28.0 40.0 48 34.112021625558434 35.0 33.0 38.0 29.0 40.0 49 34.052648371776044 35.0 33.0 37.0 28.0 40.0 50 33.93913530871272 35.0 33.0 37.0 28.0 40.0 51 33.82367447278854 35.0 33.0 37.0 28.0 40.0 52 33.449331364536896 35.0 33.0 37.0 27.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 8.0 13 12.0 14 34.0 15 93.0 16 293.0 17 598.0 18 1249.0 19 2103.0 20 3588.0 21 5643.0 22 8563.0 23 12591.0 24 17515.0 25 24015.0 26 32297.0 27 42643.0 28 53451.0 29 65231.0 30 82397.0 31 111829.0 32 162039.0 33 266839.0 34 556103.0 35 307381.0 36 412538.0 37 548534.0 38 706692.0 39 79721.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 0.0 100.0 0.0 0.0 2 0.0 100.0 0.0 0.0 3 0.0 100.0 0.0 0.0 4 0.0 100.0 0.0 0.0 5 0.0 0.0 0.0 100.0 6 100.0 0.0 0.0 0.0 7 99.55142719667397 0.34497697204510724 0.057534213736179375 0.04606161754473884 8 99.24834517788518 0.5904962383012339 0.09740291244126002 0.06375567137233369 9 93.56587125235659 3.2321328583716564 1.9738002432647013 1.2281956460070513 10 57.064921766597166 29.73385859939578 4.877736941930969 8.32348269207609 11 43.09378248071776 20.513915231783546 19.635890618783893 16.7564116687148 12 37.68419652728509 15.4182275010117 23.07407358785754 23.82350238384567 13 27.328380520330754 15.36848437871896 25.68143511333612 31.62169998761416 14 23.407378192135734 17.59405388467244 32.00098059304761 26.997587330144217 15 29.378379350240095 17.986205487325634 27.97992124433719 24.65549391809708 16 37.055914922422986 18.75369934149581 22.48063785351721 21.709747882563992 17 32.97769236433084 20.099018208322942 24.40323949586787 22.52004993147835 18 32.959113607811865 20.228812654787298 22.856550880964107 23.955522856436726 19 29.776467022564486 25.872245506709184 20.644394609363808 23.706892861362522 20 32.79221872590256 25.12273109433157 20.32581602407761 21.75923415568827 21 30.19370422733777 25.629665736492157 22.311859411039148 21.864770625130923 22 26.830806603420886 22.03083788194185 28.020446335361683 23.117909179275582 23 30.928035999979453 20.111175735630287 26.176469077357833 22.784319187032427 24 34.48548259961039 20.81985113022196 20.48229424526584 24.212372024901814 25 30.223555808472714 20.55329877094819 20.17227729892848 29.050868121650613 26 24.54456361611666 20.34273953039981 25.651554993404684 29.46114186007885 27 24.25983204347486 18.70795165071253 24.65908980645559 32.37312649935702 28 25.336543757680502 25.27173215083781 20.607693717069797 28.784030374411884 29 31.09139207112325 24.065111834981828 19.591940872179865 25.251555221715055 30 29.59692945380739 19.791170210519287 26.09090976546246 24.520990570210863 31 33.793901944119895 19.22792852287185 23.801613126933148 23.17655640607511 32 37.80388823978982 19.492340472408408 20.583778205606045 22.11999308219573 33 37.21011003989153 19.48098203140295 21.79687682826665 21.51203110043887 34 29.320388515759984 21.144365785179346 29.32175837799179 20.213487321068882 35 26.502410672140027 28.617049876113082 25.503895260333753 19.376644191413135 36 26.604122942852204 30.596386645898033 20.734177663140603 22.06531274810916 37 31.709913407583674 27.338568870679868 18.761975592479686 22.189542129256775 38 31.246899973230608 27.600555022514257 19.325046047348145 21.827498956906986 39 32.821014371567145 23.86285738421382 19.340200148287586 23.97592809593145 40 29.85472040255685 21.57104933159285 19.6306965578216 28.943533708028706 41 24.918165001047374 25.797844864243796 20.19025674072104 29.093733393987787 42 23.246876000641553 23.392423862771768 21.522961459496884 31.837738677089796 43 24.22709804389381 19.977300241266985 22.980152408588808 32.81544930625039 44 26.205350339411908 18.84682143446265 22.52196203084359 32.42586619528185 45 30.55666064117543 20.143652886042872 21.793537789076606 27.50614868370509 46 27.519618995651257 26.049328738967613 20.949588499093323 25.481463766287803 47 25.15686349494093 22.502641265615715 23.684204518148107 28.656290721295253 48 25.817451017436632 21.173532435198382 27.139368071136943 25.86964847622804 49 30.912282584313594 19.80954919546279 23.970163259039236 25.308004961184384 50 26.126811571454585 20.002043377829125 24.00677853494376 29.864366515772538 51 23.18429041992556 21.460290262391403 27.221588343842267 28.133830973840766 52 23.38120811574879 21.129753921373332 25.50717722193081 29.981860740947063 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 0.0 1 0.0 2 0.0 3 4.5 4 9.0 5 18.0 6 27.0 7 309.5 8 592.0 9 1431.0 10 2270.0 11 2829.0 12 3388.0 13 3758.5 14 4148.5 15 4168.0 16 4882.0 17 5596.0 18 5665.0 19 5734.0 20 6477.5 21 7221.0 22 8303.5 23 9386.0 24 10676.5 25 11967.0 26 13957.0 27 15947.0 28 19365.5 29 22784.0 30 25671.0 31 28558.0 32 32375.5 33 36193.0 34 38579.5 35 40966.0 36 47367.0 37 53768.0 38 56602.0 39 66922.0 40 74408.0 41 76651.0 42 78894.0 43 88923.0 44 98952.0 45 107764.0 46 116576.0 47 127071.0 48 137566.0 49 142042.5 50 146519.0 51 157765.5 52 169012.0 53 187528.0 54 206044.0 55 247652.5 56 289261.0 57 312782.5 58 336304.0 59 354584.0 60 372864.0 61 387802.0 62 402740.0 63 320911.0 64 201741.0 65 164400.0 66 141518.0 67 118636.0 68 97629.5 69 76623.0 70 68152.0 71 59681.0 72 57722.0 73 55763.0 74 43576.5 75 31390.0 76 20939.5 77 10489.0 78 7429.5 79 4370.0 80 3102.0 81 1834.0 82 1054.5 83 275.0 84 189.5 85 104.0 86 69.5 87 35.0 88 27.5 89 17.5 90 15.0 91 10.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3504002.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 9.60149759420523 #Duplication Level Percentage of deduplicated Percentage of total 1 70.73125215161559 6.791259473688605 2 9.879217250914937 1.8971056133458115 3 3.670984506468955 1.0574084672167903 4 1.7832716550085737 0.6848831402151678 5 0.9291297510544423 0.44605185347268655 6 0.5942444692976856 0.34233821053988955 7 0.41577145583271985 0.2794420043041946 8 0.33320278294954664 0.25593965750980474 9 0.30041920395342736 0.2596026837610695 >10 6.736227702079788 18.1131711366876 >50 2.9468666448353824 19.550880707544476 >100 1.547635346033276 28.705539693906907 >500 0.08258427861477775 5.246237745107897 >1k 0.04263376116214159 7.554902961144084 >5k 0.0050683492290657835 3.0739168864676234 >10k+ 0.0014906909497252303 5.741319765087387 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 85861 2.4503696059534215 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 39055 1.114582697155995 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTC 31716 0.9051364696709647 No Hit AAAACGGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAA 30919 0.8823910488635565 No Hit AAAACGGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGC 13014 0.37140389760051506 No Hit AAAACGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCTC 9904 0.28264824049757964 No Hit AAAACGGGGGAGTCCCGCCCGGGAGCCGGCAGGGAGCGGAGCTGTGGAGCCT 8833 0.25208318945023434 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCT 7714 0.22014827617107524 No Hit AAAACGGGGGGGGCTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGCTC 7647 0.21823617680583515 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTT 7133 0.20356723540682914 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGACTGCTC 6409 0.1829051467436377 No Hit AAAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCT 5953 0.16989145554140664 No Hit AAAACGGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGC 5760 0.16438346781765537 No Hit AAAACGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACCT 5625 0.16053073029067907 No Hit AAAACGGGGGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGA 5606 0.15998849315725278 No Hit AAAACGGGGGATGCCGACTGGCGATGCGGCGGCGTTATTCCCATGACCCGCC 5533 0.15790516101303595 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCT 5465 0.15596452285129975 No Hit AAAACGGGGGAGCCACCCCTGAGCATTGCCTTCTGAGCTGTTCTGTGGGACC 5330 0.15211178532432346 No Hit AAAACGGGGGACTCTTAGCGGTGGATCACTCGGCTCGTGCGTCGATGAAGAA 5172 0.14760265547793638 No Hit AAAACGGGGGGGCAGTGGTGGCGCACGCCTTTCGTCCCAGCACTTGGGAGGC 5163 0.14734580630947128 No Hit AAAACGGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCT 5130 0.1464040260250993 No Hit AAAACGGGGGCTTTGCAGACGCCACTGTCGCTTTTCGCCGCTTGCTGCAGCC 5006 0.14286521525958032 No Hit AAAACGGGGGGGCTGGCGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 4760 0.13584467132153463 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCTGACTGCTC 4582 0.13076476554522515 No Hit AAAACGGGGGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCA 4480 0.12785380830262083 No Hit AAAACGGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGAT 4410 0.1258560925478924 No Hit AAAACGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTC 4388 0.12522823902497773 No Hit AAAACGGGGGGGGCTGGTGAGATGGCTCAGTGGGTTAGAGCACCCGATTGCT 4377 0.1249143122635204 No Hit AAAACGGGGCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAT 4151 0.11846454425539711 No Hit AAAACGGGGGGGGACTGGAGAGATGGCTCAGGGGTTAAGAGCACTGACTGCT 3818 0.10896112502218891 No Hit AAAACGGGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAG 3791 0.10819057751679366 No Hit AAAACGGGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGTTCT 3786 0.10804788353431305 No Hit AAAACGGGGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTC 3780 0.10787665075533634 No Hit AAAACGGGGGCAGGTTCTCTTACATCGACCGCCTAAGAGTCGCGCTGTAAGA 3773 0.10767687917986347 No Hit AAAACGGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTC 3658 0.1043949175828096 No Hit AAAACGGGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT 3580 0.10216889145611219 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 3.4246555795344866E-4 0.0 0.0 0.0 0.0 8 9.417802843719838E-4 0.0 0.0 0.0 0.0 9 0.004594746235875436 0.0 0.0 0.0 0.0 10 0.01783674781007545 0.0 0.0 0.0 0.0 11 0.034731715335778915 0.0 0.0 0.0 0.0 12 0.05042805340864531 0.0 0.0 0.0 0.0 13 0.06015978301382248 0.0 0.0 0.0 0.0 14 0.0738298665354643 0.0 0.0 0.0 0.0 15 0.08807072598702854 0.0 0.0 0.0 0.0 16 0.1006848740383139 0.0 0.0 0.0 0.0 17 0.11244285819471564 0.0 0.0 0.0 0.0 18 0.12374422160717945 0.0 0.0 0.0 0.0 19 0.14123850385930145 0.0 0.0 0.0 0.0 20 0.15550790210736182 0.0 0.0 0.0 0.0 21 0.16723734746726743 0.0 0.0 0.0 0.0 22 0.17842455569374674 0.0 0.0 0.0 0.0 23 0.1903252338326291 0.0 0.0 0.0 0.0 24 0.20351015781383686 0.0 0.0 0.0 0.0 25 0.21643823262657955 0.0 0.0 0.0 0.0 26 0.2289096866953843 0.0 0.0 0.0 0.0 27 0.24072474844477829 0.0 0.0 0.0 0.0 28 0.25787656513894686 0.0 0.0 0.0 0.0 29 0.26952039410936407 0.0 0.0 0.0 0.0 30 0.28076467992883564 0.0 0.0 0.0 0.0 31 0.28869846535475724 0.0 0.0 0.0 0.0 32 0.2970317939316245 0.0 0.0 0.0 0.0 33 0.30362425592222836 0.0 0.0 0.0 0.0 34 0.3126425156150025 0.0 0.0 0.0 0.0 35 0.32982287110566716 0.0 0.0 0.0 0.0 36 0.34902948114755644 0.0 0.0 0.0 0.0 37 0.36424065967998875 0.0 0.0 0.0 0.0 38 0.37454316521508835 0.0 0.0 0.0 0.0 39 0.3833331145358935 0.0 0.0 0.0 0.0 40 0.3925226070076444 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGGAT 28380 0.0 45.01938 5 AAAACGG 356620 0.0 44.99969 1 ACGGGGG 192820 0.0 44.987293 4 AACGGGG 332240 0.0 44.98236 3 AAACGGG 354450 0.0 44.973454 2 ACGGGTA 2465 0.0 44.880325 4 CGGGGGG 100080 0.0 44.777378 5 ACGGGGC 26845 0.0 44.58633 4 CGGGGGA 38505 0.0 44.518635 5 AACGGGT 6925 0.0 44.372562 3 ACGGGGA 99845 0.0 44.29997 4 CGGGGAG 35375 0.0 44.12749 5 CGGGGGT 25155 0.0 43.951897 5 ACGGGGT 14800 0.0 43.94865 4 CGGGGGC 31725 0.0 43.288574 5 CGGGGCA 8960 0.0 43.22768 5 AACGGGC 4185 0.0 43.197132 3 CGGGGAC 18040 0.0 42.95288 5 ACGGGAT 2400 0.0 42.933334 4 AACGGGA 11855 0.0 42.837624 3 >>END_MODULE